BLASTX nr result

ID: Glycyrrhiza30_contig00036203 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00036203
         (261 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_006018729.1 MULTISPECIES: conjugal transfer protein TrbC [Bra...   119   3e-33
SFO92301.1 type IV secretion system protein VirB2 [Bradyrhizobiu...   116   4e-32
WP_038936972.1 conjugal transfer protein TrbC [Bradyrhizobium ja...   116   4e-32
WP_028152638.1 conjugal transfer protein TrbC [Bradyrhizobium ja...   116   4e-32
WP_036006829.1 conjugal transfer protein TrbC [Bradyrhizobium yu...   114   4e-31
SFV19569.1 type IV secretion system protein VirB2 [Bradyrhizobiu...   113   9e-31
WP_050387944.1 conjugal transfer protein TrbC [Bradyrhizobium pa...   113   9e-31
WP_028168199.1 conjugal transfer protein TrbC [Bradyrhizobium el...   110   7e-30
SFN38554.1 type IV secretion system protein VirB2 [Bradyrhizobiu...   110   1e-29
SFJ93036.1 type IV secretion system protein VirB2 [Bradyrhizobiu...   109   2e-29
WP_066503754.1 conjugal transfer protein TrbC [Bradyrhizobium sp...   109   2e-29
WP_036030496.1 conjugal transfer protein TrbC [Bradyrhizobium yu...   109   3e-29
WP_027571461.1 conjugal transfer protein TrbC [Bradyrhizobium sp...   108   6e-29
OKO86268.1 conjugal transfer protein TrbC [Bradyrhizobium sp. NA...   108   8e-29
WP_018272745.1 conjugal transfer protein TrbC [Bradyrhizobium el...   107   1e-28
WP_057026411.1 conjugal transfer protein TrbC [Bradyrhizobium yu...   107   2e-28
WP_074124994.1 conjugal transfer protein TrbC [Bradyrhizobium sp...   104   2e-27
WP_076861800.1 conjugal transfer protein TrbC [Bradyrhizobium sp...   103   6e-27
SED24083.1 type IV secretion system protein VirB2 [Bradyrhizobiu...   102   1e-26
WP_027531663.1 conjugal transfer protein TrbC [Bradyrhizobium sp...   102   1e-26

>WP_006018729.1 MULTISPECIES: conjugal transfer protein TrbC [Bradyrhizobiaceae]
           ADU42211.1 Conjugal transfer protein TrbC
           [Rhodopseudomonas palustris DX-1] EKS40940.1
           hypothetical protein HMPREF9695_00032 [Afipia broomeae
           ATCC 49717]
          Length = 107

 Score =  119 bits (298), Expect = 3e-33
 Identities = 65/83 (78%), Positives = 65/83 (78%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQIRFLRGASVAAFGTVLL       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQIRFLRGASVAAFGTVLLAAAPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>SFO92301.1 type IV secretion system protein VirB2 [Bradyrhizobium sp. Ghvi]
          Length = 107

 Score =  116 bits (291), Expect = 4e-32
 Identities = 63/83 (75%), Positives = 64/83 (77%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ RFLRGAS+AAFGTVLL       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFRFLRGASLAAFGTVLLAVQPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>WP_038936972.1 conjugal transfer protein TrbC [Bradyrhizobium japonicum]
           KGT76922.1 conjugal transfer protein TrbC
           [Bradyrhizobium japonicum]
          Length = 107

 Score =  116 bits (291), Expect = 4e-32
 Identities = 63/83 (75%), Positives = 64/83 (77%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ RFLRGAS+AAFGTVLL       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFRFLRGASLAAFGTVLLASASAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>WP_028152638.1 conjugal transfer protein TrbC [Bradyrhizobium japonicum]
          Length = 107

 Score =  116 bits (291), Expect = 4e-32
 Identities = 63/83 (75%), Positives = 64/83 (77%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ RFLRGAS+AAFGTVLL       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFRFLRGASLAAFGTVLLASASAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>WP_036006829.1 conjugal transfer protein TrbC [Bradyrhizobium yuanmingense]
          Length = 107

 Score =  114 bits (284), Expect = 4e-31
 Identities = 62/83 (74%), Positives = 63/83 (75%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MR Q RFLRGAS+AAFGTVLL       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRVQFRFLRGASLAAFGTVLLAAVPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>SFV19569.1 type IV secretion system protein VirB2 [Bradyrhizobium arachidis]
          Length = 107

 Score =  113 bits (282), Expect = 9e-31
 Identities = 61/83 (73%), Positives = 62/83 (74%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ RF RGAS+AAFG VLL       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFRFFRGASLAAFGAVLLASAPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>WP_050387944.1 conjugal transfer protein TrbC [Bradyrhizobium pachyrhizi]
          Length = 107

 Score =  113 bits (282), Expect = 9e-31
 Identities = 61/83 (73%), Positives = 62/83 (74%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ RFLRGAS+ AFG VLL       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFRFLRGASLVAFGAVLLTSAPVWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>WP_028168199.1 conjugal transfer protein TrbC [Bradyrhizobium elkanii]
          Length = 107

 Score =  110 bits (276), Expect = 7e-30
 Identities = 60/83 (72%), Positives = 62/83 (74%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ R LRGAS+AA+GTV L       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFRSLRGASLAAYGTVFLAVQPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>SFN38554.1 type IV secretion system protein VirB2 [Bradyrhizobium sp. Rc3b]
          Length = 107

 Score =  110 bits (274), Expect = 1e-29
 Identities = 59/83 (71%), Positives = 62/83 (74%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ R LRGAS+A+FG VL+       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFRLLRGASLASFGAVLVAAPPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>SFJ93036.1 type IV secretion system protein VirB2 [Bradyrhizobium sp. Gha]
          Length = 107

 Score =  109 bits (273), Expect = 2e-29
 Identities = 59/83 (71%), Positives = 62/83 (74%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ R  +GAS++AFGTVLL       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFRVFQGASLSAFGTVLLAAAPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>WP_066503754.1 conjugal transfer protein TrbC [Bradyrhizobium sp. BR 10303]
           KWV58091.1 conjugal transfer protein TrbC
           [Bradyrhizobium sp. BR 10303]
          Length = 108

 Score =  109 bits (273), Expect = 2e-29
 Identities = 62/84 (73%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = -3

Query: 250 MRQQIRFLR-GASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXX 74
           MRQQ RFLR  AS+AAFGTVLL       AGSNMPWEQPLNQILQSVEGP          
Sbjct: 1   MRQQFRFLRDAASLAAFGTVLLAAAPARAAGSNMPWEQPLNQILQSVEGPVAKIIAVIII 60

Query: 73  XVTGLTLAFGDSSGGFRRLIQIVF 2
            VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VVTGLTLAFGDSSGGFRRLIQIVF 84


>WP_036030496.1 conjugal transfer protein TrbC [Bradyrhizobium yuanmingense]
           SCB51074.1 type IV secretion system protein VirB2
           [Bradyrhizobium yuanmingense]
          Length = 107

 Score =  109 bits (272), Expect = 3e-29
 Identities = 59/83 (71%), Positives = 61/83 (73%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ RFLRGAS+  FG V+L       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFRFLRGASLGLFGFVVLGAGPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>WP_027571461.1 conjugal transfer protein TrbC [Bradyrhizobium sp. WSM1743]
          Length = 107

 Score =  108 bits (270), Expect = 6e-29
 Identities = 60/83 (72%), Positives = 61/83 (73%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           M QQ  FLRGAS+AAF TVLL       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MCQQFPFLRGASLAAFSTVLLGAAPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>OKO86268.1 conjugal transfer protein TrbC [Bradyrhizobium sp. NAS80.1]
          Length = 108

 Score =  108 bits (269), Expect = 8e-29
 Identities = 61/84 (72%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = -3

Query: 250 MRQQIRFLRGAS-VAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXX 74
           MRQQ RFLR AS +AAFGTV+L       AGSNMPWEQPLNQILQSVEGP          
Sbjct: 1   MRQQFRFLRDASSLAAFGTVVLASAPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIII 60

Query: 73  XVTGLTLAFGDSSGGFRRLIQIVF 2
            VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VVTGLTLAFGDSSGGFRRLIQIVF 84


>WP_018272745.1 conjugal transfer protein TrbC [Bradyrhizobium elkanii] OIM94133.1
           conjugal transfer protein TrbC [Bradyrhizobium elkanii]
          Length = 107

 Score =  107 bits (268), Expect = 1e-28
 Identities = 59/83 (71%), Positives = 60/83 (72%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MRQQ  FLRGAS AAF  VL+       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRQQFHFLRGASTAAFVAVLVASPPAWAAGSNMPWEQPLNQILQSVEGPVAKIVAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>WP_057026411.1 conjugal transfer protein TrbC [Bradyrhizobium yuanmingense]
           KRQ01817.1 conjugal transfer protein TrbC
           [Bradyrhizobium yuanmingense]
          Length = 107

 Score =  107 bits (267), Expect = 2e-28
 Identities = 58/83 (69%), Positives = 61/83 (73%)
 Frame = -3

Query: 250 MRQQIRFLRGASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXXX 71
           MR Q RFLR AS+AAFG +L+       AGSNMPWEQPLNQILQSVEGP           
Sbjct: 1   MRHQFRFLRRASLAAFGAMLVAASPSWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIIIV 60

Query: 70  VTGLTLAFGDSSGGFRRLIQIVF 2
           VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VTGLTLAFGDSSGGFRRLIQIVF 83


>WP_074124994.1 conjugal transfer protein TrbC [Bradyrhizobium sp. NAS96.2]
           OKO83779.1 conjugal transfer protein TrbC
           [Bradyrhizobium sp. NAS96.2]
          Length = 108

 Score =  104 bits (260), Expect = 2e-27
 Identities = 59/84 (70%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
 Frame = -3

Query: 250 MRQQIRFLRG-ASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXX 74
           MRQQ R L+  AS+AAFGT+LL       AGSNMPWEQPLNQILQSVEGP          
Sbjct: 1   MRQQFRVLQDTASLAAFGTILLATAPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIII 60

Query: 73  XVTGLTLAFGDSSGGFRRLIQIVF 2
            VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VVTGLTLAFGDSSGGFRRLIQIVF 84


>WP_076861800.1 conjugal transfer protein TrbC [Bradyrhizobium sp. SEMIA 6399]
          Length = 108

 Score =  103 bits (257), Expect = 6e-27
 Identities = 59/84 (70%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = -3

Query: 250 MRQQIRFLR-GASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXX 74
           MRQ+ RFLR  AS+ A GTVLL       AGSNMPWEQPLNQILQSVEGP          
Sbjct: 1   MRQKFRFLRDAASLTASGTVLLATAPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIII 60

Query: 73  XVTGLTLAFGDSSGGFRRLIQIVF 2
            VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VVTGLTLAFGDSSGGFRRLIQIVF 84


>SED24083.1 type IV secretion system protein VirB2 [Bradyrhizobium
           erythrophlei]
          Length = 108

 Score =  102 bits (255), Expect = 1e-26
 Identities = 59/84 (70%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = -3

Query: 250 MRQQIRFLR-GASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXX 74
           MR Q RF R  AS+AAFGT LL       AGSNMPWEQPLNQILQSVEGP          
Sbjct: 1   MRPQFRFPREAASLAAFGTFLLTTAPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIII 60

Query: 73  XVTGLTLAFGDSSGGFRRLIQIVF 2
            VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VVTGLTLAFGDSSGGFRRLIQIVF 84


>WP_027531663.1 conjugal transfer protein TrbC [Bradyrhizobium sp. WSM3983]
          Length = 108

 Score =  102 bits (255), Expect = 1e-26
 Identities = 59/84 (70%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
 Frame = -3

Query: 250 MRQQIRFLR-GASVAAFGTVLLXXXXXXXAGSNMPWEQPLNQILQSVEGPXXXXXXXXXX 74
           MR + RFLR  AS+AA GTVLL       AGSNMPWEQPLNQILQSVEGP          
Sbjct: 1   MRPRFRFLREAASLAASGTVLLTTVPAWAAGSNMPWEQPLNQILQSVEGPVAKIIAVIII 60

Query: 73  XVTGLTLAFGDSSGGFRRLIQIVF 2
            VTGLTLAFGDSSGGFRRLIQIVF
Sbjct: 61  VVTGLTLAFGDSSGGFRRLIQIVF 84