BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00034367
         (370 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AFP55578.1 copia-type polyprotein [Rosa rugosa]                       132   3e-33
CAN74984.1 hypothetical protein VITISV_035210 [Vitis vinifera]        119   7e-31
KHN13189.1 Retrovirus-related Pol polyprotein from transposon TN...   120   2e-30
KHN41486.1 Retrovirus-related Pol polyprotein from transposon TN...   120   3e-30
KHN48836.1 Retrovirus-related Pol polyprotein from transposon TN...   120   3e-30
KHN44034.1 Retrovirus-related Pol polyprotein from transposon TN...   120   3e-30
KHN31954.1 Retrovirus-related Pol polyprotein from transposon TN...   120   3e-30
KHN14051.1 Retrovirus-related Pol polyprotein from transposon TN...   120   3e-30
KHN40953.1 Retrovirus-related Pol polyprotein from transposon TN...   120   3e-30
KHN36591.1 Retrovirus-related Pol polyprotein from transposon TN...   120   8e-30
KHN22605.1 Retrovirus-related Pol polyprotein from transposon TN...   117   2e-29
CAN76698.1 hypothetical protein VITISV_011792 [Vitis vinifera]        116   7e-28
KHN39047.1 Retrovirus-related Pol polyprotein from transposon TN...   113   7e-28
KHN02838.1 Retrovirus-related Pol polyprotein from transposon TN...   113   7e-28
CAN68842.1 hypothetical protein VITISV_023226 [Vitis vinifera]        108   2e-27
KYP57479.1 Retrovirus-related Pol polyprotein from transposon TN...   111   2e-27
CAB75932.1 putative protein [Arabidopsis thaliana]                    107   3e-27
GAU26746.1 hypothetical protein TSUD_317440 [Trifolium subterran...   113   9e-27
JAU28342.1 Retrovirus-related Pol polyprotein from transposon TN...   102   1e-25
CAN76379.1 hypothetical protein VITISV_017862 [Vitis vinifera]        109   2e-25

>AFP55578.1 copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  132 bits (331), Expect = 3e-33
 Identities = 58/96 (60%), Positives = 72/96 (75%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQ  NKA VEC+KCHKLGHF+YECP W+ +ANY              M++VE+NNSK+E+
Sbjct: 213 RQGFNKALVECYKCHKLGHFQYECPNWERTANYAELEEEEELLL---MAYVEINNSKRED 269

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+MCGNR+WFS +DE F+HSVK  N T
Sbjct: 270 VWFLDSGCSNHMCGNRKWFSNLDETFKHSVKLGNNT 305


>CAN74984.1 hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  119 bits (298), Expect(2) = 7e-31
 Identities = 51/91 (56%), Positives = 67/91 (73%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQ+ NKA VEC+KCH+LGHF+YECP W++ ANY              MS+VE+N S++E+
Sbjct: 179 RQTFNKAIVECYKCHQLGHFQYECPKWEKEANYAELEEKEEMLL---MSYVELNQSRRED 235

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
           +WFLDSGCSN+MC N++WF  +DE FR SVK
Sbjct: 236 VWFLDSGCSNHMCANKEWFLDLDEEFRQSVK 266



 Score = 42.0 bits (97), Expect(2) = 7e-31
 Identities = 18/33 (54%), Positives = 27/33 (81%)
 Frame = +3

Query: 270 KTLKLDNDSKMEVMGKGNIQLEINGAIQVVTDI 368
           +++KL N+SKM V+GK NI+L+I G  QV+TD+
Sbjct: 263 QSVKLGNNSKMAVLGKDNIRLQIAGVTQVITDV 295


>KHN13189.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 342

 Score =  120 bits (300), Expect = 2e-30
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS NKA +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 238 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 296

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 297 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 332


>KHN41486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 349

 Score =  120 bits (300), Expect = 3e-30
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS NKA +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337


>KHN48836.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 351

 Score =  120 bits (300), Expect = 3e-30
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS NKA +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337


>KHN44034.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 351

 Score =  120 bits (300), Expect = 3e-30
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS NKA +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337


>KHN31954.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 351

 Score =  120 bits (300), Expect = 3e-30
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS NKA +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337


>KHN14051.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 351

 Score =  120 bits (300), Expect = 3e-30
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS NKA +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 243 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 301

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 302 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 337


>KHN40953.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 354

 Score =  120 bits (300), Expect = 3e-30
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS NKA +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 246 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 304

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 305 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 340


>KHN36591.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 430

 Score =  120 bits (300), Expect = 8e-30
 Identities = 54/96 (56%), Positives = 69/96 (71%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS NKA +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 230 RQSFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 288

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 289 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 324


>KHN22605.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 342

 Score =  117 bits (294), Expect = 2e-29
 Identities = 53/96 (55%), Positives = 68/96 (70%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQ  NKA +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 238 RQLFNKAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 296

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 297 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 332


>CAN76698.1 hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  116 bits (291), Expect = 7e-28
 Identities = 51/90 (56%), Positives = 67/90 (74%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQ+ NKA VEC+KCH+LGHF+YECP W++ A+Y              MS+VE+N S++E+
Sbjct: 197 RQAFNKAIVECYKCHQLGHFQYECPKWEKGAHYAELBEKEXMLL---MSYVELNQSRKED 253

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSV 270
           +WFLDSGC N+MCGN+ WFS +DE FR SV
Sbjct: 254 VWFLDSGCXNHMCGNKLWFSDLDEEFRQSV 283


>KHN39047.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 342

 Score =  113 bits (283), Expect = 7e-28
 Identities = 50/96 (52%), Positives = 67/96 (69%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           + S  +A +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 201 KASRGRAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 259

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 260 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 295


>KHN02838.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 342

 Score =  113 bits (283), Expect = 7e-28
 Identities = 50/96 (52%), Positives = 67/96 (69%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           + S  +A +ECFKCHKLGH++YECP W+++ANYV             MS+VE+   K EE
Sbjct: 201 KASRGRAVIECFKCHKLGHYQYECPDWEKNANYVELEKEKDEELLL-MSYVELEQDKMEE 259

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           +WFLDSGCSN+M GN++WFS +DE+F  +VK  N T
Sbjct: 260 VWFLDSGCSNHMTGNKEWFSELDESFSQTVKLGNNT 295


>CAN68842.1 hypothetical protein VITISV_023226 [Vitis vinifera]
          Length = 1146

 Score =  108 bits (271), Expect(2) = 2e-27
 Identities = 47/90 (52%), Positives = 65/90 (72%)
 Frame = +1

Query: 4   QSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEEM 183
           Q+ +KA V+C+KCH+LGHF+YECP W++ AN V             MS+VE+N S++E++
Sbjct: 478 QTFSKAIVKCYKCHQLGHFQYECPKWEKEANNVELEEKEEMLL---MSYVELNQSRREDV 534

Query: 184 WFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
           WFLDS CSN+ C N++WFS +DE FR SVK
Sbjct: 535 WFLDSRCSNHTCANKEWFSGLDEEFRQSVK 564



 Score = 40.8 bits (94), Expect(2) = 2e-27
 Identities = 17/33 (51%), Positives = 27/33 (81%)
 Frame = +3

Query: 270 KTLKLDNDSKMEVMGKGNIQLEINGAIQVVTDI 368
           +++KL N+SKM ++GKGNI+ +I G  QV+TD+
Sbjct: 561 QSVKLGNNSKMTMLGKGNIRWKIAGVTQVITDV 593


>KYP57479.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 294

 Score =  111 bits (277), Expect = 2e-27
 Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEV--NNSKQ 174
           RQ+ N+ TVEC+KCHKLGH++ ECP W + ANY              MS+V++  N+S+Q
Sbjct: 160 RQNINRVTVECYKCHKLGHYQNECPLWDKEANYAEFDEEEEILL---MSYVDLPQNHSEQ 216

Query: 175 EEMWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLT 288
           EE WFLDSGCSN+MCG+R  FS +DE FRHSVK  N T
Sbjct: 217 EEAWFLDSGCSNHMCGDRSKFSEMDEIFRHSVKLGNNT 254


>CAB75932.1 putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  107 bits (266), Expect(2) = 3e-27
 Identities = 44/91 (48%), Positives = 64/91 (70%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           R  +N+A VEC+KCH LGHF+YECP W+++ANY              M++VE N + ++E
Sbjct: 242 RSGTNRAIVECYKCHNLGHFQYECPEWEKNANYAELEEEEELLL---MAYVEQNQANRDE 298

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
           +WFLDSGCSN+M G+++WFS ++E F  +VK
Sbjct: 299 VWFLDSGCSNHMTGSKEWFSELEEGFNRTVK 329



 Score = 42.0 bits (97), Expect(2) = 3e-27
 Identities = 14/37 (37%), Positives = 29/37 (78%)
 Frame = +3

Query: 258 QALGKTLKLDNDSKMEVMGKGNIQLEINGAIQVVTDI 368
           +   +T+KL ND++M V+GKG++++++NG  QV+ ++
Sbjct: 322 EGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEV 358


>GAU26746.1 hypothetical protein TSUD_317440 [Trifolium subterraneum]
          Length = 1608

 Score =  113 bits (283), Expect = 9e-27
 Identities = 52/98 (53%), Positives = 66/98 (67%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS N+AT+ECFKCHKLGHF+YECP W+  ANY              M++ E+    QEE
Sbjct: 241 RQSLNRATIECFKCHKLGHFQYECPDWENKANYA---ELEEEEELLLMAYEELRQPSQEE 297

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVKH*NLTTI 294
            WFLDSGCSN+M GN++WFS ++E F  +VK  N TT+
Sbjct: 298 AWFLDSGCSNHMTGNKKWFSEMEEGFCRTVKLGNDTTM 335


>JAU28342.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Noccaea caerulescens]
          Length = 408

 Score =  102 bits (255), Expect(2) = 1e-25
 Identities = 44/91 (48%), Positives = 61/91 (67%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           R   N+AT+ECF+CHKLGHF+YECPT ++ ANYV             M+  E+   + + 
Sbjct: 245 RPPLNRATIECFRCHKLGHFQYECPTTEKRANYV---EFDEGEPLLLMAHTEITEKEVKG 301

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
           +WFLDSGCSN+M GN++WF  +D+ FRH V+
Sbjct: 302 LWFLDSGCSNHMTGNKEWFMELDDNFRHGVR 332



 Score = 40.8 bits (94), Expect(2) = 1e-25
 Identities = 15/31 (48%), Positives = 25/31 (80%)
 Frame = +3

Query: 276 LKLDNDSKMEVMGKGNIQLEINGAIQVVTDI 368
           ++L N S+MEVMGKG+++ E+ G  Q+V+D+
Sbjct: 331 VRLGNSSRMEVMGKGDVKFEVEGVTQIVSDV 361


>CAN76379.1 hypothetical protein VITISV_017862 [Vitis vinifera]
          Length = 639

 Score =  109 bits (273), Expect = 2e-25
 Identities = 48/91 (52%), Positives = 64/91 (70%)
 Frame = +1

Query: 1   RQSSNKATVECFKCHKLGHFKYECPTWKESANYVXXXXXXXXXXXXXMSFVEVNNSKQEE 180
           RQS NK TV+C+KCHKLGHF+YECP+W + AN+              MS+VE+N +K+E+
Sbjct: 299 RQSFNKDTVKCYKCHKLGHFQYECPSWDKEANF---SELGEEEVMLLMSYVEINEAKKED 355

Query: 181 MWFLDSGCSNYMCGNRQWFSCIDEAFRHSVK 273
           +WFLDSGCSN+MCG++  F   +E FR  VK
Sbjct: 356 VWFLDSGCSNHMCGDKTLFCDFNECFRQMVK 386