BLASTX nr result

ID: Glycyrrhiza30_contig00032919 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00032919
         (237 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_024583947.1 MULTISPECIES: LysR family transcriptional regulat...   124   4e-33
SFO51517.1 transcriptional regulator [Variovorax sp. PDC80]            54   8e-07
WP_057595690.1 LysR family transcriptional regulator [Variovorax...    54   8e-07

>WP_024583947.1 MULTISPECIES: LysR family transcriptional regulator
           [Bradyrhizobium] KIU44235.1 hypothetical protein
           QU41_32035 [Bradyrhizobium elkanii] OCX27974.1
           hypothetical protein QU42_29060 [Bradyrhizobium sp.
           UASWS1016]
          Length = 297

 Score =  124 bits (311), Expect = 4e-33
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = -3

Query: 235 REIDIGFVHARPARGEPLRSKLIHGEAFRLAVPRASKFGAAPSARELGKARFIALPGSSA 56
           REIDIGF HARP + EP+RSKLI+ EAF+LAVPRASK+GAAPSAREL KA+FIA PGS A
Sbjct: 141 REIDIGFAHARPGQDEPVRSKLIYQEAFKLAVPRASKYGAAPSARELSKAKFIAWPGSGA 200

Query: 55  A*GRGELVKACRSAGFEP 2
           A GR ELV+ACR+AGFEP
Sbjct: 201 AGGRSELVEACRAAGFEP 218


>SFO51517.1 transcriptional regulator [Variovorax sp. PDC80]
          Length = 295

 Score = 54.3 bits (129), Expect = 8e-07
 Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
 Frame = -3

Query: 229 IDIGFVH-ARPARGEPLRSKLIHGEAFRLAVP--RASKFGAAPSARELGKARFIALPGSS 59
           IDIGF H A PA  + L S+ +  E + LA+P   A   G    AR L  A F+ LP  +
Sbjct: 143 IDIGFTHRAPPASDDALASRRVAREPYLLALPADHALATGRRAGARALDGAPFVFLPRQA 202

Query: 58  AA*GRGELVKACRSAGFEP 2
              GR ++++ACR AGF P
Sbjct: 203 TPEGRAQMLEACRRAGFTP 221


>WP_057595690.1 LysR family transcriptional regulator [Variovorax paradoxus]
           KPU96554.1 hypothetical protein APR52_13520 [Variovorax
           paradoxus] KPU99358.1 hypothetical protein APR50_33440
           [Variovorax paradoxus] KPV00945.1 hypothetical protein
           APR49_32525 [Variovorax paradoxus] KPV16585.1
           hypothetical protein APR51_29975 [Variovorax paradoxus]
           KPV19457.1 hypothetical protein APR47_40600 [Variovorax
           paradoxus] KPV26175.1 hypothetical protein APR48_31980
           [Variovorax paradoxus]
          Length = 295

 Score = 54.3 bits (129), Expect = 8e-07
 Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
 Frame = -3

Query: 229 IDIGFVH-ARPARGEPLRSKLIHGEAFRLAVP--RASKFGAAPSARELGKARFIALPGSS 59
           IDIGF H A PA  + L S+ +  E + LA+P   A   G    AR L  A F+ LP  +
Sbjct: 143 IDIGFAHRAPPASDDALASRRVAREPYLLALPADHALATGRRAGARALDGAPFVFLPRQA 202

Query: 58  AA*GRGELVKACRSAGFEP 2
              GR ++++ACR AGF P
Sbjct: 203 TPEGRAQMLEACRRAGFTP 221


Top