BLASTX nr result

ID: Glycyrrhiza30_contig00032308 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00032308
         (262 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU47630.1 hypothetical protein TSUD_137600 [Trifolium subterran...    60   2e-08
GAU46750.1 hypothetical protein TSUD_402760 [Trifolium subterran...    59   4e-08
XP_003593181.2 replication factor-A carboxy-terminal domain prot...    57   1e-07
XP_013446466.1 replication factor-A carboxy-terminal domain prot...    57   1e-07
GAU42709.1 hypothetical protein TSUD_382450 [Trifolium subterran...    55   6e-07
GAU20673.1 hypothetical protein TSUD_230870 [Trifolium subterran...    54   2e-06
GAU47399.1 hypothetical protein TSUD_372880 [Trifolium subterran...    54   2e-06
GAU46627.1 hypothetical protein TSUD_284750 [Trifolium subterran...    53   3e-06
KRH65871.1 hypothetical protein GLYMA_03G067500, partial [Glycin...    53   3e-06
GAU42088.1 hypothetical protein TSUD_134720 [Trifolium subterran...    53   4e-06
XP_003628568.2 replication factor-A carboxy-terminal domain prot...    52   8e-06

>GAU47630.1 hypothetical protein TSUD_137600 [Trifolium subterraneum]
          Length = 416

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +3

Query: 51  IPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKFKDEMNK 206
           +P EI  L G+T LFKVE K + N+ F QSFRV+KICAD ++I +FK + +K
Sbjct: 242 LPNEIAGLVGQTLLFKVETKAKFNTKFEQSFRVRKICADANVISQFKMKWDK 293


>GAU46750.1 hypothetical protein TSUD_402760 [Trifolium subterraneum]
          Length = 676

 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 26/58 (44%), Positives = 40/58 (68%)
 Frame = +3

Query: 33  ISGNHAIPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKFKDEMNK 206
           I G  ++P +I  L   T+LFKVE K  +N  F Q+FR++KIC D +II++FKD+ ++
Sbjct: 361 IGGVGSVPPQIARLVDNTWLFKVETKPSTNPRFEQTFRIRKICTDHAIIKQFKDKWDR 418


>XP_003593181.2 replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] AES63432.2 replication factor-A
           carboxy-terminal domain protein [Medicago truncatula]
          Length = 555

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
 Frame = +3

Query: 33  ISGNHAIPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKFKDE----- 197
           +S  H +P EI  + GKTFLFKVE K   N  F QSFRV+KICA   +I +FK +     
Sbjct: 382 VSEGH-LPPEIAGIIGKTFLFKVETKVDQNPRFEQSFRVRKICAMPDVINEFKKKWGEEE 440

Query: 198 ---MNKPLDLSPVSGFVSDGKEKM 260
                  ++ S +S  +  GK  M
Sbjct: 441 AAFFKNAMEASSLSVLLDKGKAPM 464


>XP_013446466.1 replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] KEH20493.1 replication factor-A
           carboxy-terminal domain protein [Medicago truncatula]
          Length = 555

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
 Frame = +3

Query: 33  ISGNHAIPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKFKDE----- 197
           +S  H +P EI  + GKTFLFKVE K   N  F QSFRV+KICA   +I +FK +     
Sbjct: 382 VSEGH-LPPEIAGIIGKTFLFKVETKVDQNPRFEQSFRVRKICAMPDVINEFKKKWGEEE 440

Query: 198 ---MNKPLDLSPVSGFVSDGKEKM 260
                  ++ S +S  +  GK  M
Sbjct: 441 AAFFKNAMEASSLSVLLDKGKAPM 464


>GAU42709.1 hypothetical protein TSUD_382450 [Trifolium subterraneum]
          Length = 234

 Score = 54.7 bits (130), Expect = 6e-07
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = +3

Query: 39  GNHAIPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKFKDE 197
           G   +P  + +L  KT+LFKVE K   N  F QSFRV+KIC D+ II++FKD+
Sbjct: 15  GVGVVPPLLEDLVEKTWLFKVEAKPSHNPKFEQSFRVRKICTDDQIIKQFKDK 67


>GAU20673.1 hypothetical protein TSUD_230870 [Trifolium subterraneum]
          Length = 531

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
 Frame = +3

Query: 33  ISGNHAIPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKFKDEMN--- 203
           + G   +P  +  L  KT+LFKVE K   N  F  S+RV+KIC D++II++FKD+ +   
Sbjct: 337 VVGVGVVPPLLEGLVEKTWLFKVEAKPSHNPKFEPSYRVRKICTDDAIIKQFKDKWDAED 396

Query: 204 -----KPLDLSPVSGFVSDGKE 254
                   DLS +SG    GK+
Sbjct: 397 AKFRKNRNDLSCLSGQCDKGKD 418


>GAU47399.1 hypothetical protein TSUD_372880 [Trifolium subterraneum]
          Length = 564

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 28/59 (47%), Positives = 38/59 (64%)
 Frame = +3

Query: 30  IISGNHAIPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKFKDEMNK 206
           I  G  A+P ++ +L   T+LFKVE K   N  F QSFRVKKIC D +II +F+ + +K
Sbjct: 279 ITGGVGAMPPQLHSLIDNTWLFKVEAKANQNQRFEQSFRVKKICTDAAIITQFQLKWDK 337


>GAU46627.1 hypothetical protein TSUD_284750 [Trifolium subterraneum]
          Length = 526

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = +3

Query: 51  IPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKFKDE 197
           +P  +  L  KT+ FKVE K   N  F QSFRV+KIC D++II++FKD+
Sbjct: 313 VPPLLEGLVDKTWFFKVEAKPSHNPKFEQSFRVRKICTDDAIIKQFKDK 361


>KRH65871.1 hypothetical protein GLYMA_03G067500, partial [Glycine max]
          Length = 256

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = +3

Query: 51  IPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQ 182
           +P++I +L  K+F+FKVE KKQ NS F +SF V++IC D SII+
Sbjct: 213 LPKQIVDLSNKSFVFKVEAKKQVNSRFEESFHVQRICYDASIIK 256


>GAU42088.1 hypothetical protein TSUD_134720 [Trifolium subterraneum]
          Length = 321

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = +3

Query: 39  GNHAIPEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKFKDEMNK 206
           G  A+P ++ +L   T+LFKVE K   N  F QSFRVKKIC D +II +F+ + +K
Sbjct: 19  GVGAMPPQLHSLIDNTWLFKVEAKANQNQRFEQSFRVKKICTDAAIITQFQLKWDK 74


>XP_003628568.2 replication factor-A carboxy-terminal domain protein [Medicago
           truncatula] AET03044.2 replication factor-A
           carboxy-terminal domain protein [Medicago truncatula]
          Length = 575

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = +3

Query: 54  PEEICNLKGKTFLFKVELKKQSNSLFGQSFRVKKICADESIIQKF 188
           P EI  LKGK FLFKV+    S   F  S+RVK++CAD SI+ KF
Sbjct: 384 PPEIVMLKGKRFLFKVDKPVISGGFFDGSYRVKRVCADSSIVAKF 428


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