BLASTX nr result

ID: Glycyrrhiza30_contig00032054 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00032054
         (218 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_056910274.1 methyl-accepting chemotaxis protein [Pseudolabrys...    75   3e-14
SFK95672.1 Methyl-accepting chemotaxis protein [Roseomonas stagn...    60   9e-09
WP_052401510.1 methyl-accepting chemotaxis protein [Roseomonas a...    56   2e-07
SFK58813.1 Methyl-accepting chemotaxis protein [Roseomonas stagn...    51   9e-06

>WP_056910274.1 methyl-accepting chemotaxis protein [Pseudolabrys sp. Root1462]
           KQZ00076.1 hypothetical protein ASD45_03835
           [Pseudolabrys sp. Root1462]
          Length = 672

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 36/65 (55%), Positives = 47/65 (72%)
 Frame = -3

Query: 216 EGYFIGYRNLADQMRKASGEGGKYSLTTPQWVETTTPQLGTLLQVMYAAGHASEARTEGL 37
           E YF  +R+L+D+M+K S  GGKY +TT QWV+TTTP L TLL VM  AG ASEA T  L
Sbjct: 245 ESYFGKFRSLSDEMQKISAAGGKYPITTDQWVDTTTPLLATLLDVMNGAGAASEAYTANL 304

Query: 36  RQAAM 22
           + +++
Sbjct: 305 KSSSL 309


>SFK95672.1 Methyl-accepting chemotaxis protein [Roseomonas stagni DSM 19981]
          Length = 716

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 32/58 (55%), Positives = 40/58 (68%)
 Frame = -3

Query: 210 YFIGYRNLADQMRKASGEGGKYSLTTPQWVETTTPQLGTLLQVMYAAGHASEARTEGL 37
           YF G+R+LAD+M +  G  G+YS+    +VETTTPQLGTLL V+  A  ASEAR   L
Sbjct: 278 YFEGFRSLADRMVR-EGAAGRYSMEAGAFVETTTPQLGTLLGVLAGASRASEARAATL 334


>WP_052401510.1 methyl-accepting chemotaxis protein [Roseomonas aerilata]
          Length = 711

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -3

Query: 210 YFIGYRNLADQMRKASG-EGGKYSLTTPQWVETTTPQLGTLLQVMYAAGHASEAR 49
           YF  +R L+D++ +A   E G+Y +T   +VET+T Q+GTLL VM+A G AS+AR
Sbjct: 271 YFENFRKLSDELVRAGATEAGRYPMTAANYVETSTRQIGTLLAVMHAGGQASQAR 325


>SFK58813.1 Methyl-accepting chemotaxis protein [Roseomonas stagni DSM 19981]
          Length = 707

 Score = 51.2 bits (121), Expect = 9e-06
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
 Frame = -3

Query: 210 YFIGYRNLADQM--RKASGEGGKYSLTTPQWVETTTPQLGTLLQVMYAAGHASEARTEGL 37
           YF G+R   D+   R A   GG+Y +T  +W+E   P +GTLLQV  AAG ASE   E +
Sbjct: 268 YFEGFRRRVDEAVRRGAEAPGGRYGMTGREWIEGGNPLVGTLLQVRDAAGTASEDHMEAV 327


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