BLASTX nr result
ID: Glycyrrhiza30_contig00031439
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza30_contig00031439
(284 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_006022641.1 MULTISPECIES: hypothetical protein [Bradyrhizobia... 152 6e-41
WP_028745427.1 UvrD/REP helicase [Rhizobium mesoamericanum] 141 5e-37
OJV02363.1 hypothetical protein BGO16_02125 [Nitrobacter sp. 62-23] 127 3e-34
WP_036046175.1 UvrD/REP helicase [Bradyrhizobium yuanmingense] 126 7e-32
WP_062313513.1 DNA helicase UvrD [Bradyrhizobium sp. CCH10-C7] 108 2e-25
OJW21335.1 DNA helicase UvrD [Rhodospirillales bacterium 69-11] 105 2e-24
SDD08953.1 CRISPR-associated exonuclease Cas4 [Bradyrhizobium sp... 103 6e-24
WP_047557283.1 UvrD/REP helicase [Mesorhizobium sp. F7] 101 4e-23
WP_023801774.1 hypothetical protein [Mesorhizobium sp. L48C026A0... 98 7e-23
WP_012112800.1 UvrD/REP helicase [Xanthobacter autotrophicus] AB... 100 8e-23
WP_015669949.1 UvrD/REP helicase [Bradyrhizobium oligotrophicum]... 98 9e-22
WP_023806267.1 DNA helicase [Mesorhizobium sp. L2C089B000] ESZ03... 78 7e-15
WP_040980044.1 hypothetical protein [Mesorhizobium plurifarium] ... 77 3e-14
WP_041000699.1 hypothetical protein [Mesorhizobium sp. SOD10] CD... 77 3e-14
WP_024574494.1 MULTISPECIES: hypothetical protein [Afipia] 75 9e-14
WP_068881380.1 hypothetical protein [Paramesorhizobium deserti] ... 73 4e-13
WP_023731491.1 hypothetical protein [Mesorhizobium sp. LNJC405B0... 72 8e-13
WP_074070588.1 hypothetical protein [Rhizobium gallicum] APO6988... 72 8e-13
WP_064994709.1 hypothetical protein [Mesorhizobium sp. WSM1497] ... 71 3e-12
ESX79378.1 DNA helicase [Mesorhizobium sp. LSHC414A00] 71 3e-12
>WP_006022641.1 MULTISPECIES: hypothetical protein [Bradyrhizobiaceae] EKS34029.1
hypothetical protein HMPREF9695_03939 [Afipia broomeae
ATCC 49717] KQW19590.1 DNA helicase UvrD [Afipia sp.
Root123D2]
Length = 1104
Score = 152 bits (384), Expect = 6e-41
Identities = 74/76 (97%), Positives = 76/76 (100%)
Frame = +2
Query: 35 MPLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 214
MPLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE
Sbjct: 905 MPLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 964
Query: 215 EMPVVAARARVLMTRI 262
EMPVVAARARVLMT++
Sbjct: 965 EMPVVAARARVLMTQL 980
>WP_028745427.1 UvrD/REP helicase [Rhizobium mesoamericanum]
Length = 1107
Score = 141 bits (355), Expect = 5e-37
Identities = 67/75 (89%), Positives = 73/75 (97%)
Frame = +2
Query: 38 PLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEE 217
PLQWLRPSDHDPDR P GEAIA+EPG+APETELPVGAGRVRGLILHKL+EEMLTGELAEE
Sbjct: 906 PLQWLRPSDHDPDRVPIGEAIAIEPGDAPETELPVGAGRVRGLILHKLIEEMLTGELAEE 965
Query: 218 MPVVAARARVLMTRI 262
MP+VAARARVLMT++
Sbjct: 966 MPIVAARARVLMTQL 980
>OJV02363.1 hypothetical protein BGO16_02125 [Nitrobacter sp. 62-23]
Length = 262
Score = 127 bits (318), Expect = 3e-34
Identities = 59/75 (78%), Positives = 67/75 (89%)
Frame = +2
Query: 38 PLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEE 217
PLQWLRPSDHDPDR P GE IA+EPG+APETELPVGAGRVRGL+LHKLMEE+ TGEL EE
Sbjct: 61 PLQWLRPSDHDPDRMPIGEVIAIEPGDAPETELPVGAGRVRGLVLHKLMEELFTGELVEE 120
Query: 218 MPVVAARARVLMTRI 262
+AARAR+LMT++
Sbjct: 121 RSDIAARARLLMTQL 135
>WP_036046175.1 UvrD/REP helicase [Bradyrhizobium yuanmingense]
Length = 1107
Score = 126 bits (317), Expect = 7e-32
Identities = 59/75 (78%), Positives = 68/75 (90%)
Frame = +2
Query: 38 PLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEE 217
PLQWLRPSDHDPDR P GE IA+EPG+ P ELPVGAGRVRGL+LHKLMEE+LTGELAEE
Sbjct: 906 PLQWLRPSDHDPDRMPIGEVIAIEPGDNPAIELPVGAGRVRGLVLHKLMEELLTGELAEE 965
Query: 218 MPVVAARARVLMTRI 262
+ V+AARAR+LMT++
Sbjct: 966 ISVIAARARLLMTQL 980
>WP_062313513.1 DNA helicase UvrD [Bradyrhizobium sp. CCH10-C7]
Length = 1103
Score = 108 bits (269), Expect = 2e-25
Identities = 52/76 (68%), Positives = 61/76 (80%)
Frame = +2
Query: 35 MPLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 214
+PL W+RPSDHDPDR P EAIA+E G+A E E PVGAGRVRGL+LHKLMEE+LTGELAE
Sbjct: 906 VPLAWIRPSDHDPDRLPMIEAIALESGDATEAEAPVGAGRVRGLLLHKLMEEVLTGELAE 965
Query: 215 EMPVVAARARVLMTRI 262
+ AARA L+T +
Sbjct: 966 DAAGFAARAEELLTEL 981
>OJW21335.1 DNA helicase UvrD [Rhodospirillales bacterium 69-11]
Length = 1105
Score = 105 bits (262), Expect = 2e-24
Identities = 49/76 (64%), Positives = 61/76 (80%)
Frame = +2
Query: 35 MPLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 214
+PL W+RPSDHDPDR EAI ++ G+APE +LPVGAGRVRGL+LHKLMEE+LTGEL E
Sbjct: 906 VPLTWVRPSDHDPDRLQATEAITLDAGDAPEVDLPVGAGRVRGLLLHKLMEEVLTGELVE 965
Query: 215 EMPVVAARARVLMTRI 262
E+ A+RAR L+ +
Sbjct: 966 EVGHFASRARELLAEL 981
>SDD08953.1 CRISPR-associated exonuclease Cas4 [Bradyrhizobium sp. R5]
Length = 1105
Score = 103 bits (258), Expect = 6e-24
Identities = 49/76 (64%), Positives = 60/76 (78%)
Frame = +2
Query: 35 MPLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 214
+PL W+RPSDHDPDR EAI ++ G+APE LPVGAGRVRGL+LHKLMEE+LTGEL E
Sbjct: 906 VPLTWVRPSDHDPDRLQAIEAITLDAGDAPEVNLPVGAGRVRGLLLHKLMEEVLTGELVE 965
Query: 215 EMPVVAARARVLMTRI 262
E+ A+RAR L+ +
Sbjct: 966 EVERFASRARELVAEL 981
>WP_047557283.1 UvrD/REP helicase [Mesorhizobium sp. F7]
Length = 1106
Score = 101 bits (252), Expect = 4e-23
Identities = 48/76 (63%), Positives = 58/76 (76%)
Frame = +2
Query: 35 MPLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 214
+PL W+RPSDHDPDR EAI ++ G+APE LPVGAGRVRGL+LHKLMEE+LTGEL E
Sbjct: 906 VPLTWVRPSDHDPDRLETFEAITLDAGDAPEVNLPVGAGRVRGLLLHKLMEEVLTGELIE 965
Query: 215 EMPVVAARARVLMTRI 262
E+ A R R L+ +
Sbjct: 966 EVGRFARRTRELLAEL 981
>WP_023801774.1 hypothetical protein [Mesorhizobium sp. L48C026A00] ESZ13074.1
hypothetical protein X737_26720 [Mesorhizobium sp.
L48C026A00]
Length = 267
Score = 97.8 bits (242), Expect = 7e-23
Identities = 45/76 (59%), Positives = 58/76 (76%)
Frame = +2
Query: 35 MPLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 214
+PL WL+PS DPD P EAIA++ G+APETELP+GAGR RGL+LHKLMEE+LT EL +
Sbjct: 64 VPLTWLQPSKQDPDSVPMTEAIAIDSGDAPETELPIGAGRFRGLVLHKLMEEVLTAELDD 123
Query: 215 EMPVVAARARVLMTRI 262
++ A RAR L+ +
Sbjct: 124 DLASFAHRARALIAEL 139
>WP_012112800.1 UvrD/REP helicase [Xanthobacter autotrophicus] ABS66033.1 UvrD/REP
helicase [Xanthobacter autotrophicus Py2]
Length = 1107
Score = 100 bits (250), Expect = 8e-23
Identities = 47/74 (63%), Positives = 59/74 (79%)
Frame = +2
Query: 41 LQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEEM 220
L W+RPSDHDPDR EAI ++ G+APE +LPVGAGRVRGL+LHKLMEE+L+GEL EE+
Sbjct: 908 LTWVRPSDHDPDRLEAVEAITLDAGDAPEVDLPVGAGRVRGLLLHKLMEEVLSGELVEEV 967
Query: 221 PVVAARARVLMTRI 262
+RAR L+T +
Sbjct: 968 GRFVSRARELLTEL 981
>WP_015669949.1 UvrD/REP helicase [Bradyrhizobium oligotrophicum] BAM92875.1 UvrD/REP
helicase [Bradyrhizobium oligotrophicum S58]
Length = 1105
Score = 97.8 bits (242), Expect = 9e-22
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +2
Query: 35 MPLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 214
+PL W+RPSDHDPDR EAI ++ G+APE PVGAGRVRGL+LHKLMEE+LTGEL E
Sbjct: 906 VPLTWVRPSDHDPDRLQSIEAITLDAGDAPEVNQPVGAGRVRGLLLHKLMEEVLTGELVE 965
Query: 215 EMPVVAARA 241
E+ A+RA
Sbjct: 966 EVERFASRA 974
>WP_023806267.1 DNA helicase [Mesorhizobium sp. L2C089B000] ESZ03526.1 DNA helicase
[Mesorhizobium sp. L2C089B000]
Length = 1100
Score = 78.2 bits (191), Expect = 7e-15
Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Frame = +2
Query: 38 PLQWLRPSDHDPDRAP-RGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 214
PL+W+ PS HD DRA ++A+EP A E P+GAGR RGL+LHKLMEE+LTGEL+
Sbjct: 908 PLRWVNPSGHDADRAEILTPSVAVEPSGAFEYIEPIGAGRTRGLVLHKLMEELLTGELSP 967
Query: 215 EMPVVAARARVL--MTRISSASSPV 283
+ VVA R+L + I A P+
Sbjct: 968 QGDVVARAVRLLNELLAIDPAEGPL 992
>WP_040980044.1 hypothetical protein [Mesorhizobium plurifarium] CDX14165.1 UvrD/REP
helicase [Mesorhizobium plurifarium]
Length = 1100
Score = 76.6 bits (187), Expect = 3e-14
Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 41 LQWLRPSDHDPDRAP-RGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEE 217
L+W+ PS HDPDRA A+A+EPG E P+GAGR+RGLILHKLMEE+LTGEL+ +
Sbjct: 911 LRWVNPSVHDPDRAEILTPAMAIEPGSTFEYVEPIGAGRIRGLILHKLMEELLTGELSPQ 970
Query: 218 MPVVAARARV 247
V A R+
Sbjct: 971 DDVSARAERL 980
>WP_041000699.1 hypothetical protein [Mesorhizobium sp. SOD10] CDX38825.1 UvrD/REP
helicase [Mesorhizobium sp. SOD10]
Length = 1100
Score = 76.6 bits (187), Expect = 3e-14
Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 41 LQWLRPSDHDPDRAP-RGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEE 217
L+W+ PS HDPDRA A+A+EPG E P+GAGR+RGLILHKLMEE+LTGEL+ +
Sbjct: 911 LRWVNPSVHDPDRAEILTPAMAIEPGSTFEYVEPIGAGRIRGLILHKLMEELLTGELSPQ 970
Query: 218 MPVVAARARV 247
V A R+
Sbjct: 971 DDVSARAERL 980
>WP_024574494.1 MULTISPECIES: hypothetical protein [Afipia]
Length = 1099
Score = 75.1 bits (183), Expect = 9e-14
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +2
Query: 41 LQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEEM 220
L W+RPSDHD DRA + +A EA + P+G GRVRG++LHKLMEE LTGEL +
Sbjct: 907 LTWIRPSDHDHDRAEALDPVAKTVDEAFDFVQPIGPGRVRGVLLHKLMEEFLTGELLDTD 966
Query: 221 PVVA-ARARVLMTRISSASSP 280
PVV RA L+ + +P
Sbjct: 967 PVVVEQRAAQLLEELLGDEAP 987
>WP_068881380.1 hypothetical protein [Paramesorhizobium deserti] KXF77192.1
hypothetical protein ATN84_07180 [Paramesorhizobium
deserti]
Length = 1095
Score = 73.2 bits (178), Expect = 4e-13
Identities = 39/75 (52%), Positives = 48/75 (64%)
Frame = +2
Query: 38 PLQWLRPSDHDPDRAPRGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEE 217
P+ WLRPSDHD DRA R E ++ E E + G GR+RGL+LHKLMEE+L LAEE
Sbjct: 899 PITWLRPSDHDADRAQRVEMVSDSLDEEAEAWIATG-GRLRGLVLHKLMEEILEEGLAEE 957
Query: 218 MPVVAARARVLMTRI 262
+ RAR L +I
Sbjct: 958 TSALTGRARELSAQI 972
>WP_023731491.1 hypothetical protein [Mesorhizobium sp. LNJC405B00] ESX87098.1
hypothetical protein X755_29370 [Mesorhizobium sp.
LNJC405B00]
Length = 1100
Score = 72.4 bits (176), Expect = 8e-13
Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +2
Query: 41 LQWLRPSDHDPDRAP-RGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEE 217
L+W+ PS HD DRA A+A EP A E P GAGR RGL+LHKLMEE+LTGEL+ +
Sbjct: 909 LRWVNPSAHDADRAEILAPAMAPEPSGAFEYVEPTGAGRTRGLVLHKLMEELLTGELSPQ 968
Query: 218 MPVVAARARVL--MTRISSASSPV 283
V A R+L + I A P+
Sbjct: 969 DDVAARAERLLNELLAIDPAEGPL 992
>WP_074070588.1 hypothetical protein [Rhizobium gallicum] APO69880.1 DNA helicase
UvrD-like protein (plasmid) [Rhizobium gallicum]
Length = 1106
Score = 72.4 bits (176), Expect = 8e-13
Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +2
Query: 38 PLQWLRPSDHDPDRAPRG-EAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAE 214
PL W RPS+HD DR + + +A E+ GAG RG+ILHKLMEE+LTGELA+
Sbjct: 903 PLTWRRPSEHDADRLGDSLDGVITLESQAERLEI-AGAGARRGVILHKLMEELLTGELAD 961
Query: 215 EMPVVAARARVLMTRISSAS 274
E+ ARAR L+ +++S++
Sbjct: 962 ELAATVARARFLLDQLTSST 981
>WP_064994709.1 hypothetical protein [Mesorhizobium sp. WSM1497] OBQ85445.1
hypothetical protein A9K65_12825 [Mesorhizobium sp.
WSM1497]
Length = 1100
Score = 70.9 bits (172), Expect = 3e-12
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = +2
Query: 41 LQWLRPSDHDPDRAP-RGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEE 217
L+W+ PS HD DRA A A P A E P+GAGR RGL+LHKLMEE+LTGEL+ +
Sbjct: 909 LRWVNPSAHDADRAEILAPATAAGPSGAFEYVEPIGAGRTRGLVLHKLMEELLTGELSPQ 968
Query: 218 MPVVAARARVL--MTRISSASSPV 283
V A R+L + I A P+
Sbjct: 969 DDVAARAGRLLNELLAIDPAEGPL 992
>ESX79378.1 DNA helicase [Mesorhizobium sp. LSHC414A00]
Length = 1100
Score = 70.9 bits (172), Expect = 3e-12
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = +2
Query: 41 LQWLRPSDHDPDRAP-RGEAIAMEPGEAPETELPVGAGRVRGLILHKLMEEMLTGELAEE 217
L+W+ PS HD DRA A A P A E P+GAGR RGL+LHKLMEE+LTGEL+ +
Sbjct: 909 LRWVNPSAHDADRAEILAPATAAGPSGAFEYVEPIGAGRTRGLVLHKLMEELLTGELSPQ 968
Query: 218 MPVVAARARVL--MTRISSASSPV 283
V A R+L + I A P+
Sbjct: 969 DDVAARAGRLLNELLAIDPAEGPL 992