BLASTX nr result

ID: Glycyrrhiza30_contig00031076 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00031076
         (644 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004510641.1 PREDICTED: serine/arginine-rich splicing factor R...    83   9e-16
XP_006598891.1 PREDICTED: serine/arginine-rich splicing factor R...    77   2e-13
XP_019456901.1 PREDICTED: serine/arginine-rich splicing factor R...    75   1e-12
GAU47186.1 hypothetical protein TSUD_350510 [Trifolium subterran...    43   8e-08
XP_003627533.2 RNA-binding (RRM/RBD/RNP motif) family protein [M...    61   1e-07
XP_006583212.1 PREDICTED: serine/arginine-rich splicing factor R...    59   5e-07

>XP_004510641.1 PREDICTED: serine/arginine-rich splicing factor RS31 isoform X2
           [Cicer arietinum]
          Length = 236

 Score = 82.8 bits (203), Expect = 9e-16
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -2

Query: 118 LNFGFKPLNAIMICFLIQRLFSFMCISPHLYSGFAFVYY 2
           +NFGFKPLNAIMICFLIQRL+SFMCISPHLYSGFAFVY+
Sbjct: 1   MNFGFKPLNAIMICFLIQRLYSFMCISPHLYSGFAFVYF 39


>XP_006598891.1 PREDICTED: serine/arginine-rich splicing factor RS31 isoform X2
           [Glycine max] KRH06427.1 hypothetical protein
           GLYMA_16G022300 [Glycine max] KRH06428.1 hypothetical
           protein GLYMA_16G022300 [Glycine max] KRH06429.1
           hypothetical protein GLYMA_16G022300 [Glycine max]
          Length = 261

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 35/39 (89%), Positives = 37/39 (94%)
 Frame = -2

Query: 118 LNFGFKPLNAIMICFLIQRLFSFMCISPHLYSGFAFVYY 2
           +NFGFKPL AIMI FLIQRL+SFMCISPHLYSGFAFVYY
Sbjct: 1   MNFGFKPLIAIMILFLIQRLYSFMCISPHLYSGFAFVYY 39


>XP_019456901.1 PREDICTED: serine/arginine-rich splicing factor RS31-like isoform
           X1 [Lupinus angustifolius] OIW04600.1 hypothetical
           protein TanjilG_18077 [Lupinus angustifolius]
          Length = 255

 Score = 74.7 bits (182), Expect = 1e-12
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = -2

Query: 130 TISDLNFGFKPLNAIMICFLIQRLFSFMCISPHLYSGFAFVYY 2
           T+SDLNFGFKPL AIMI FLIQ L SFMCIS H+YSGFAFVYY
Sbjct: 2   TMSDLNFGFKPLIAIMILFLIQCLHSFMCISLHIYSGFAFVYY 44


>GAU47186.1 hypothetical protein TSUD_350510 [Trifolium subterraneum]
          Length = 291

 Score = 42.7 bits (99), Expect(2) = 8e-08
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = -1

Query: 485 VSFDAGTSTKGKYAELLSWLANLFSAIFF 399
           V   +GT+TKGKYAELLSWLANL SA FF
Sbjct: 31  VDMKSGTTTKGKYAELLSWLANL-SANFF 58



 Score = 41.6 bits (96), Expect(2) = 8e-08
 Identities = 20/26 (76%), Positives = 21/26 (80%), Gaps = 3/26 (11%)
 Frame = -3

Query: 417 LLCNFFLD---PACLLSFYPQICIFS 349
           L  NFFL+   PACLLSFYPQICIFS
Sbjct: 53  LSANFFLEGNLPACLLSFYPQICIFS 78


>XP_003627533.2 RNA-binding (RRM/RBD/RNP motif) family protein [Medicago
          truncatula] AET02009.2 RNA-binding (RRM/RBD/RNP motif)
          family protein [Medicago truncatula]
          Length = 235

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -2

Query: 85 MICFLIQRLFSFMCISPHLYSGFAFVYY 2
          MICFLIQ L+SFMCISPHLYSGFAFVYY
Sbjct: 1  MICFLIQHLYSFMCISPHLYSGFAFVYY 28


>XP_006583212.1 PREDICTED: serine/arginine-rich splicing factor RS31-like isoform
          X2 [Glycine max] KRH47862.1 hypothetical protein
          GLYMA_07G053200 [Glycine max] KRH47863.1 hypothetical
          protein GLYMA_07G053200 [Glycine max] KRH47864.1
          hypothetical protein GLYMA_07G053200 [Glycine max]
          Length = 245

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -2

Query: 85 MICFLIQRLFSFMCISPHLYSGFAFVYY 2
          MI FLIQRL+SFMCISPHLYSGFAFVYY
Sbjct: 1  MILFLIQRLYSFMCISPHLYSGFAFVYY 28


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