BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00029994
         (248 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFK38916.1 putative mRNA 3-end processing factor [Methylobacteri...   162   2e-47
WP_056237928.1 DNA ligase-associated DEXH box helicase [Methylob...   161   7e-47
WP_012455299.1 DNA ligase-associated DEXH box helicase [Methylob...   154   2e-44
BAU92164.1 mRNA 3-end processing factor [Methylobacterium populi]     153   2e-43
WP_060770604.1 DNA ligase-associated DEXH box helicase [Methylob...   152   3e-43
WP_003603161.1 DNA ligase-associated DEXH box helicase [Methylob...   151   4e-43
WP_056151996.1 DNA ligase-associated DEXH box helicase [Methylob...   149   3e-42
WP_015951642.1 DNA ligase-associated DEXH box helicase [Methylob...   149   3e-42
WP_012254512.1 MULTISPECIES: DNA ligase-associated DEXH box heli...   149   3e-42
WP_076729905.1 DNA ligase-associated DEXH box helicase [Methylob...   147   1e-41
WP_012320627.1 MULTISPECIES: DNA ligase-associated DEXH box heli...   147   1e-41
KTS11255.1 beta-lactamase [Methylobacterium radiotolerans] KTS45...   147   1e-41
GAN50367.1 mRNA 3-end processing factor [Methylobacterium sp. ME...   147   1e-41
WP_053610109.1 DNA ligase-associated DEXH box helicase [Streptom...   147   1e-41
WP_043358063.1 MULTISPECIES: DNA ligase-associated DEXH box heli...   147   1e-41
AIQ91972.1 Putative mRNA 3-end processing factor [Methylobacteri...   147   1e-41
OHV15934.1 DNA ligase-associated DEXH box helicase [Methylobacte...   147   2e-41
WP_056202775.1 DNA ligase-associated DEXH box helicase [Methylob...   147   3e-41
WP_066924664.1 DNA ligase-associated DEXH box helicase, partial ...   145   4e-41
SDA16471.1 putative mRNA 3-end processing factor [Methylobacteri...   145   9e-41

>SFK38916.1 putative mRNA 3-end processing factor [Methylobacterium salsuginis]
          Length = 352

 Score =  162 bits (411), Expect = 2e-47
 Identities = 77/81 (95%), Positives = 79/81 (97%)
 Frame = -3

Query: 243 KREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFEV 64
           +REEAPLGKR+RIGDVTVFFAPAGHVLGSAQI IEGEGGRIVVSGDYKRA DPTCLPFEV
Sbjct: 72  RREEAPLGKRMRIGDVTVFFAPAGHVLGSAQIAIEGEGGRIVVSGDYKRASDPTCLPFEV 131

Query: 63  VPCDVFITEATFGLPVFRHPD 1
           VPCDVFITEATFGLPVFRHPD
Sbjct: 132 VPCDVFITEATFGLPVFRHPD 152


>WP_056237928.1 DNA ligase-associated DEXH box helicase [Methylobacterium sp.
           Leaf456] KQT61556.1 DNA ligase-associated DEXH box
           helicase [Methylobacterium sp. Leaf456]
          Length = 352

 Score =  161 bits (407), Expect = 7e-47
 Identities = 76/81 (93%), Positives = 79/81 (97%)
 Frame = -3

Query: 243 KREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFEV 64
           +REEA LG+R+RIGDVTVFFAPAGHVLGSAQI IEGEGGRIVVSGDYKRAPDPTCLPFEV
Sbjct: 72  RREEAKLGERMRIGDVTVFFAPAGHVLGSAQIAIEGEGGRIVVSGDYKRAPDPTCLPFEV 131

Query: 63  VPCDVFITEATFGLPVFRHPD 1
           VPCDVFITEATFGLPVFRHPD
Sbjct: 132 VPCDVFITEATFGLPVFRHPD 152


>WP_012455299.1 DNA ligase-associated DEXH box helicase [Methylobacterium populi]
           ACB81582.1 putative mRNA 3-end processing factor
           [Methylobacterium populi BJ001] OAH34794.1 DNA
           ligase-associated DEXH box helicase [Methylobacterium
           populi]
          Length = 352

 Score =  154 bits (390), Expect = 2e-44
 Identities = 74/82 (90%), Positives = 77/82 (93%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R R+EA LG+R+RIGDVTVFFAPAGHVLGSAQI IE EG RIVVSGDYKRAPDPTCLPFE
Sbjct: 71  RSRQEARLGERMRIGDVTVFFAPAGHVLGSAQIAIEREGQRIVVSGDYKRAPDPTCLPFE 130

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVFRHPD
Sbjct: 131 VVPCDVFITEATFGLPVFRHPD 152


>BAU92164.1 mRNA 3-end processing factor [Methylobacterium populi]
          Length = 373

 Score =  153 bits (386), Expect = 2e-43
 Identities = 72/82 (87%), Positives = 77/82 (93%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R R+EA LG+R+R+GDV+VFFAPAGHVLGSAQI IE EG RIVVSGDYKRAPDPTCLPFE
Sbjct: 92  RSRQEAQLGERMRVGDVSVFFAPAGHVLGSAQIAIEREGQRIVVSGDYKRAPDPTCLPFE 151

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVFRHPD
Sbjct: 152 VVPCDVFITEATFGLPVFRHPD 173


>WP_060770604.1 DNA ligase-associated DEXH box helicase [Methylobacterium sp. AMS5]
           AMB46388.1 beta-lactamase [Methylobacterium sp. AMS5]
          Length = 352

 Score =  152 bits (383), Expect = 3e-43
 Identities = 72/80 (90%), Positives = 76/80 (95%)
 Frame = -3

Query: 240 REEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFEVV 61
           R+EAPLG+R+RIGDVTVFFAPAGHVLGSAQI IE EG R+VVSGDYKRA DPTCLPFEVV
Sbjct: 73  RQEAPLGERMRIGDVTVFFAPAGHVLGSAQIAIEREGKRLVVSGDYKRAHDPTCLPFEVV 132

Query: 60  PCDVFITEATFGLPVFRHPD 1
           PCDVFITEATFGLPVFRHPD
Sbjct: 133 PCDVFITEATFGLPVFRHPD 152


>WP_003603161.1 DNA ligase-associated DEXH box helicase [Methylobacterium
           extorquens] ACS41184.1 conserved hypothetical protein
           [Methylobacterium extorquens AM1] EHP90871.1
           beta-lactamase domain protein [Methylobacterium
           extorquens DSM 13060]
          Length = 352

 Score =  151 bits (382), Expect = 4e-43
 Identities = 72/80 (90%), Positives = 76/80 (95%)
 Frame = -3

Query: 240 REEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFEVV 61
           R+EA LG+R+RIGDVTVFFAPAGHVLGSAQI IE +G RIVVSGDYKRAPDPTCLPFEVV
Sbjct: 73  RQEARLGERMRIGDVTVFFAPAGHVLGSAQIAIERDGKRIVVSGDYKRAPDPTCLPFEVV 132

Query: 60  PCDVFITEATFGLPVFRHPD 1
           PCDVFITEATFGLPVFRHPD
Sbjct: 133 PCDVFITEATFGLPVFRHPD 152


>WP_056151996.1 DNA ligase-associated DEXH box helicase [Methylobacterium sp.
           Leaf92] KQO96203.1 DNA ligase-associated DEXH box
           helicase [Methylobacterium sp. Leaf92]
          Length = 352

 Score =  149 bits (376), Expect = 3e-42
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = -3

Query: 240 REEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFEVV 61
           R+EA L +R+RIGDVTVFFAPAGHVLGSAQI IE +G RIVVSGDYKRAPDPTCLPFEVV
Sbjct: 73  RQEARLAERMRIGDVTVFFAPAGHVLGSAQIAIERDGKRIVVSGDYKRAPDPTCLPFEVV 132

Query: 60  PCDVFITEATFGLPVFRHPD 1
           PCDVFITEATFGLPVFRHPD
Sbjct: 133 PCDVFITEATFGLPVFRHPD 152


>WP_015951642.1 DNA ligase-associated DEXH box helicase [Methylobacterium
           extorquens] ACK84380.1 putative mRNA 3-end processing
           factor [Methylobacterium extorquens CM4]
          Length = 352

 Score =  149 bits (376), Expect = 3e-42
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = -3

Query: 240 REEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFEVV 61
           R+EA L +R+RIGDVTVFFAPAGHVLGSAQI IE +G RIVVSGDYKRAPDPTCLPFEVV
Sbjct: 73  RQEARLAERMRIGDVTVFFAPAGHVLGSAQIAIERDGKRIVVSGDYKRAPDPTCLPFEVV 132

Query: 60  PCDVFITEATFGLPVFRHPD 1
           PCDVFITEATFGLPVFRHPD
Sbjct: 133 PCDVFITEATFGLPVFRHPD 152


>WP_012254512.1 MULTISPECIES: DNA ligase-associated DEXH box helicase
           [Methylobacterium] ABY31623.1 putative mRNA 3-end
           processing factor [Methylobacterium extorquens PA1]
           CAX25660.1 conserved hypothetical protein
           [Methylobacterium extorquens DM4] KQO92819.1 DNA
           ligase-associated DEXH box helicase [Methylobacterium
           sp. Leaf90] KQP86907.1 DNA ligase-associated DEXH box
           helicase [Methylobacterium sp. Leaf119] KQQ06929.1 DNA
           ligase-associated DEXH box helicase [Methylobacterium
           sp. Leaf122]
          Length = 352

 Score =  149 bits (376), Expect = 3e-42
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = -3

Query: 240 REEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFEVV 61
           R+EA L +R+RIGDVTVFFAPAGHVLGSAQI IE +G RIVVSGDYKRAPDPTCLPFEVV
Sbjct: 73  RQEARLAERMRIGDVTVFFAPAGHVLGSAQIAIERDGKRIVVSGDYKRAPDPTCLPFEVV 132

Query: 60  PCDVFITEATFGLPVFRHPD 1
           PCDVFITEATFGLPVFRHPD
Sbjct: 133 PCDVFITEATFGLPVFRHPD 152


>WP_076729905.1 DNA ligase-associated DEXH box helicase [Methylobacterium
           radiotolerans] ONF46825.1 beta-lactamase
           [Methylobacterium radiotolerans]
          Length = 351

 Score =  147 bits (372), Expect = 1e-41
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R+R+EAPLG  +R+GDVTV FAPAGHVLGSAQI IE +G R+VVSGDYKRAPDPTCLPFE
Sbjct: 71  RQRQEAPLGAALRVGDVTVRFAPAGHVLGSAQIAIERDGVRVVVSGDYKRAPDPTCLPFE 130

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVF HPD
Sbjct: 131 VVPCDVFITEATFGLPVFTHPD 152


>WP_012320627.1 MULTISPECIES: DNA ligase-associated DEXH box helicase [Bacteria]
           ACB25668.1 putative mRNA 3-end processing factor
           [Methylobacterium radiotolerans JCM 2831] KIU30844.1
           beta-lactamase [Methylobacterium radiotolerans]
           KOX57475.1 beta-lactamase [Asanoa ferruginea]
          Length = 351

 Score =  147 bits (372), Expect = 1e-41
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R+R+EAPLG  +R+GDVTV FAPAGHVLGSAQI IE +G R+VVSGDYKRAPDPTCLPFE
Sbjct: 71  RQRQEAPLGAALRVGDVTVRFAPAGHVLGSAQIAIERDGVRVVVSGDYKRAPDPTCLPFE 130

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVF HPD
Sbjct: 131 VVPCDVFITEATFGLPVFTHPD 152


>KTS11255.1 beta-lactamase [Methylobacterium radiotolerans] KTS45925.1
           beta-lactamase [Methylobacterium radiotolerans]
           KZC01198.1 hypothetical protein AU375_02556
           [Methylobacterium radiotolerans]
          Length = 351

 Score =  147 bits (372), Expect = 1e-41
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R+R+EAPLG  +R+GDVTV FAPAGHVLGSAQI IE +G R+VVSGDYKRAPDPTCLPFE
Sbjct: 71  RQRQEAPLGAALRVGDVTVRFAPAGHVLGSAQIAIERDGVRVVVSGDYKRAPDPTCLPFE 130

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVF HPD
Sbjct: 131 VVPCDVFITEATFGLPVFTHPD 152


>GAN50367.1 mRNA 3-end processing factor [Methylobacterium sp. ME121]
          Length = 351

 Score =  147 bits (372), Expect = 1e-41
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R+R+EAPLG  +R+GDVTV FAPAGHVLGSAQI IE +G R+VVSGDYKRAPDPTCLPFE
Sbjct: 71  RQRQEAPLGAALRVGDVTVRFAPAGHVLGSAQIAIERDGVRVVVSGDYKRAPDPTCLPFE 130

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVF HPD
Sbjct: 131 VVPCDVFITEATFGLPVFTHPD 152


>WP_053610109.1 DNA ligase-associated DEXH box helicase [Streptomyces
           purpurogeneiscleroticus] KOX50619.1 beta-lactamase
           [Streptomyces purpurogeneiscleroticus]
          Length = 352

 Score =  147 bits (372), Expect = 1e-41
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R+R+EAPLG  +R+GDVTV FAPAGHVLGSAQI IE +G R+VVSGDYKRAPDPTCLPFE
Sbjct: 71  RQRQEAPLGAALRVGDVTVRFAPAGHVLGSAQIAIERDGVRVVVSGDYKRAPDPTCLPFE 130

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVF HPD
Sbjct: 131 VVPCDVFITEATFGLPVFTHPD 152


>WP_043358063.1 MULTISPECIES: DNA ligase-associated DEXH box helicase
           [Methylobacterium] SFG43309.1 putative mRNA 3-end
           processing factor [Methylobacterium phyllosphaerae]
           SFU63612.1 putative mRNA 3-end processing factor
           [Methylobacterium sp. UNCCL125] APT32465.1 DNA
           Metabolism [Methylobacterium phyllosphaerae]
          Length = 352

 Score =  147 bits (372), Expect = 1e-41
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R+R+EAPLG  +R+GDVTV FAPAGHVLGSAQI IE +G R+VVSGDYKRAPDPTCLPFE
Sbjct: 71  RQRQEAPLGAALRVGDVTVRFAPAGHVLGSAQIAIERDGVRVVVSGDYKRAPDPTCLPFE 130

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVF HPD
Sbjct: 131 VVPCDVFITEATFGLPVFTHPD 152


>AIQ91972.1 Putative mRNA 3-end processing factor [Methylobacterium oryzae
           CBMB20]
          Length = 352

 Score =  147 bits (372), Expect = 1e-41
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R+R+EAPLG  +R+GDVTV FAPAGHVLGSAQI IE +G R+VVSGDYKRAPDPTCLPFE
Sbjct: 71  RQRQEAPLGAALRVGDVTVRFAPAGHVLGSAQIAIERDGVRVVVSGDYKRAPDPTCLPFE 130

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVF HPD
Sbjct: 131 VVPCDVFITEATFGLPVFTHPD 152


>OHV15934.1 DNA ligase-associated DEXH box helicase [Methylobacterium
           extorquens]
          Length = 352

 Score =  147 bits (371), Expect = 2e-41
 Identities = 70/79 (88%), Positives = 74/79 (93%)
 Frame = -3

Query: 237 EEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFEVVP 58
           +EA L +R+RIGDVTVFFAPAGHVLGSAQI IE +G RIVVSGDYKRAPDPTCLPFEVVP
Sbjct: 74  QEARLAERMRIGDVTVFFAPAGHVLGSAQIAIERDGKRIVVSGDYKRAPDPTCLPFEVVP 133

Query: 57  CDVFITEATFGLPVFRHPD 1
           CDVFITEATFGLPVFRHPD
Sbjct: 134 CDVFITEATFGLPVFRHPD 152


>WP_056202775.1 DNA ligase-associated DEXH box helicase [Methylobacterium sp.
           Leaf123] KQQ12981.1 DNA ligase-associated DEXH box
           helicase [Methylobacterium sp. Leaf123]
          Length = 356

 Score =  147 bits (370), Expect = 3e-41
 Identities = 73/84 (86%), Positives = 76/84 (90%), Gaps = 4/84 (4%)
 Frame = -3

Query: 240 REEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGG----RIVVSGDYKRAPDPTCLP 73
           R+EA LG+R+RIGDVTVFFAPAGHVLGSAQI IE EG     RIVVSGDYKRAPDPTCLP
Sbjct: 73  RQEARLGERMRIGDVTVFFAPAGHVLGSAQIAIEREGKGPRQRIVVSGDYKRAPDPTCLP 132

Query: 72  FEVVPCDVFITEATFGLPVFRHPD 1
           FEVVPCDVFITEATFGLPVFRHPD
Sbjct: 133 FEVVPCDVFITEATFGLPVFRHPD 156


>WP_066924664.1 DNA ligase-associated DEXH box helicase, partial [Methylobacterium
           sp. CCH5-D2]
          Length = 298

 Score =  145 bits (365), Expect = 4e-41
 Identities = 70/80 (87%), Positives = 73/80 (91%)
 Frame = -3

Query: 240 REEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFEVV 61
           R+EA LG  IRIG+VTV FAPAGHVLGSAQI IE EG R+VVSGDYKRAPDPTCLPFEVV
Sbjct: 13  RQEAALGDPIRIGEVTVRFAPAGHVLGSAQIAIEREGVRVVVSGDYKRAPDPTCLPFEVV 72

Query: 60  PCDVFITEATFGLPVFRHPD 1
           PCDVFITEATFGLPVFRHPD
Sbjct: 73  PCDVFITEATFGLPVFRHPD 92


>SDA16471.1 putative mRNA 3-end processing factor [Methylobacterium sp.
           UNC378MF]
          Length = 351

 Score =  145 bits (366), Expect = 9e-41
 Identities = 69/82 (84%), Positives = 75/82 (91%)
 Frame = -3

Query: 246 RKREEAPLGKRIRIGDVTVFFAPAGHVLGSAQIVIEGEGGRIVVSGDYKRAPDPTCLPFE 67
           R+R+EA LG+ IR+GDVTV FAPAGHVLGSAQI IE +G R+VVSGDYKRAPDPTCLPFE
Sbjct: 71  RQRQEARLGEPIRVGDVTVRFAPAGHVLGSAQIAIERDGVRVVVSGDYKRAPDPTCLPFE 130

Query: 66  VVPCDVFITEATFGLPVFRHPD 1
           VVPCDVFITEATFGLPVF HPD
Sbjct: 131 VVPCDVFITEATFGLPVFTHPD 152