BLASTX nr result
ID: Glycyrrhiza30_contig00028948
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza30_contig00028948
(281 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU31120.1 hypothetical protein TSUD_212270 [Trifolium subterran... 50 1e-08
GAU46467.1 hypothetical protein TSUD_402340 [Trifolium subterran... 46 1e-08
GAU31729.1 hypothetical protein TSUD_215300 [Trifolium subterran... 50 3e-08
GAU10071.1 hypothetical protein TSUD_422240 [Trifolium subterran... 47 5e-08
GAU13938.1 hypothetical protein TSUD_262650 [Trifolium subterran... 42 8e-08
GAU12636.1 hypothetical protein TSUD_121270 [Trifolium subterran... 45 8e-08
GAU12635.1 hypothetical protein TSUD_121260 [Trifolium subterran... 45 9e-08
GAU38338.1 hypothetical protein TSUD_61990 [Trifolium subterraneum] 43 2e-07
GAU12817.1 hypothetical protein TSUD_73040 [Trifolium subterraneum] 41 3e-07
GAU47272.1 hypothetical protein TSUD_280950 [Trifolium subterran... 41 5e-07
ABD28505.2 RNA-directed DNA polymerase (Reverse transcriptase); ... 51 5e-07
GAU43243.1 hypothetical protein TSUD_241340 [Trifolium subterran... 45 5e-07
GAU31911.1 hypothetical protein TSUD_270960 [Trifolium subterran... 48 8e-07
GAU51253.1 hypothetical protein TSUD_412460, partial [Trifolium ... 47 1e-06
GAU10179.1 hypothetical protein TSUD_416550 [Trifolium subterran... 44 5e-06
>GAU31120.1 hypothetical protein TSUD_212270 [Trifolium subterraneum]
Length = 347
Score = 49.7 bits (117), Expect(2) = 1e-08
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -1
Query: 254 KESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLAN-LNWKGGSNAPQWK 90
+ES IHV+RDC +A WNHL+P R+ F+ + WF N LN++ +W+
Sbjct: 98 EESIIHVLRDCPLAHDVWNHLLPMQTRLGFFTCHYHSWFQHNMLNYEKLEGGNEWR 153
Score = 37.0 bits (84), Expect(2) = 1e-08
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 85 IWAITCYFLWFGRNKGVHDEEFRCPTH 5
+WA+TCY LW RNK D EF P +
Sbjct: 155 VWAVTCYHLWLWRNKETFDYEFVRPRY 181
>GAU46467.1 hypothetical protein TSUD_402340 [Trifolium subterraneum]
Length = 299
Score = 46.2 bits (108), Expect(2) = 1e-08
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = -1
Query: 254 KESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANLN 123
+E+++HV+RDC VA W +VP S+R F+ GD WF NL+
Sbjct: 15 EETSLHVLRDCDVAKEIWMVVVPRSVRSAFFGGDLSHWFSINLD 58
Score = 40.4 bits (93), Expect(2) = 1e-08
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 100 LNGKDIWAITCYFLWFGRNKGVHDEEFRCPTHP 2
+N + WA CYFLW RN+ HD F P P
Sbjct: 67 INWPEFWATVCYFLWNWRNREYHDNSFTRPVQP 99
>GAU31729.1 hypothetical protein TSUD_215300 [Trifolium subterraneum]
Length = 126
Score = 49.7 bits (117), Expect(2) = 3e-08
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -1
Query: 254 KESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLAN-LNWKGGSNAPQWK 90
+ES IHV+RDC +A WNHL+P R+ F+ + WF N LN++ +W+
Sbjct: 42 EESIIHVLRDCPLAHDVWNHLLPMQTRLGFFTCHYHSWFQHNMLNYEKLEGGNEWR 97
Score = 35.4 bits (80), Expect(2) = 3e-08
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2
Query: 85 IWAITCYFLWFGRNKGVHDEEFRCP 11
+WA+TCY LW RNK D EF P
Sbjct: 99 VWAVTCYHLWLWRNKENFDYEFVRP 123
>GAU10071.1 hypothetical protein TSUD_422240 [Trifolium subterraneum]
Length = 306
Score = 46.6 bits (109), Expect(2) = 5e-08
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = -1
Query: 251 ESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANLN-WKGGSNAPQW 93
E+++HV+RDC++ T W +VP R F+ D QW + N+N + G+N W
Sbjct: 50 ETSMHVMRDCSLVTPFWLQVVPMRERSTFFTEDLQQWIITNINTGRRGNNGSAW 103
Score = 37.7 bits (86), Expect(2) = 5e-08
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -2
Query: 88 DIWAITCYFLWFGRNKGVHDEEFRCPTH 5
DIWA C+ LW RNK +HD + P+H
Sbjct: 105 DIWATACHCLWTWRNKEMHDNNYVRPSH 132
>GAU13938.1 hypothetical protein TSUD_262650 [Trifolium subterraneum]
Length = 875
Score = 42.4 bits (98), Expect(2) = 8e-08
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -2
Query: 88 DIWAITCYFLWFGRNKGVHDEEFRCPTHP 2
D WA TC+ LW RNK HDEEF P P
Sbjct: 647 DFWATTCHSLWMWRNKEAHDEEFVRPMQP 675
Score = 41.2 bits (95), Expect(2) = 8e-08
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1
Query: 254 KESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANL 126
+E+T+H +RDCA+ W +VP R +F+M D W NL
Sbjct: 591 EETTLHAIRDCALIIPFWLQVVPMEDRSSFFMEDTQDWISRNL 633
>GAU12636.1 hypothetical protein TSUD_121270 [Trifolium subterraneum]
Length = 240
Score = 45.1 bits (105), Expect(2) = 8e-08
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -1
Query: 251 ESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANL-NWKGGSNAPQWKGY 84
E+ +HV+RDC + W ++V +SMR F+ GD QW NL + K WK Y
Sbjct: 16 ENELHVIRDCPLVMSLWLNVVEDSMRRMFFTGDWQQWINFNLHSSKKWREEIAWKDY 72
Score = 38.5 bits (88), Expect(2) = 8e-08
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 91 KDIWAITCYFLWFGRNKGVHDEEFRCPTH 5
KD W + C+ LW RNK H+E+F P H
Sbjct: 70 KDYWDVACHCLWSWRNKEEHEEQFHRPQH 98
>GAU12635.1 hypothetical protein TSUD_121260 [Trifolium subterraneum]
Length = 138
Score = 45.1 bits (105), Expect(2) = 9e-08
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -1
Query: 251 ESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANL-NWKGGSNAPQWKGY 84
E+ +HV+RDC + W ++V +SMR F+ GD QW NL + K WK Y
Sbjct: 16 ENELHVIRDCPLVMSLWLNVVEDSMRRMFFTGDWQQWINFNLHSSKKWREEIAWKDY 72
Score = 38.5 bits (88), Expect(2) = 9e-08
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 91 KDIWAITCYFLWFGRNKGVHDEEFRCPTH 5
KD W + C+ LW RNK H+E+F P H
Sbjct: 70 KDYWDVACHCLWSWRNKEEHEEQFHRPQH 98
>GAU38338.1 hypothetical protein TSUD_61990 [Trifolium subterraneum]
Length = 813
Score = 42.7 bits (99), Expect(2) = 2e-07
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -1
Query: 233 VRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANLN 123
+RDC AT WN+++P + FYMGD QW N+N
Sbjct: 536 MRDCPRATDIWNYVIPSKDKAIFYMGDLKQWISFNIN 572
Score = 39.3 bits (90), Expect(2) = 2e-07
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 88 DIWAITCYFLWFGRNKGVHDEEFRCPTHP 2
D WA CY LW RNK +H+E+F P P
Sbjct: 585 DFWAYCCYCLWQWRNKEIHEEQFVRPIRP 613
>GAU12817.1 hypothetical protein TSUD_73040 [Trifolium subterraneum]
Length = 375
Score = 41.2 bits (95), Expect(2) = 3e-07
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1
Query: 254 KESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANL 126
+E+T+H +RDCA+ W +VP R +F+M D W NL
Sbjct: 165 EETTLHAIRDCALIIPFWLQVVPMEDRSSFFMEDTQAWISTNL 207
Score = 40.4 bits (93), Expect(2) = 3e-07
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -2
Query: 88 DIWAITCYFLWFGRNKGVHDEEFRCPTHP 2
D WA C+ LW RNK HDEEF P P
Sbjct: 221 DFWATACHSLWMWRNKEAHDEEFVRPMQP 249
>GAU47272.1 hypothetical protein TSUD_280950 [Trifolium subterraneum]
Length = 999
Score = 40.8 bits (94), Expect(2) = 5e-07
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = -2
Query: 91 KDIWAITCYFLWFGRNKGVHDEEFRCPTHP 2
K I+ +TC+++W RNK + DE+FR P++P
Sbjct: 795 KSIFMVTCWYMWQRRNKSIFDEDFRRPSNP 824
Score = 40.0 bits (92), Expect(2) = 5e-07
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 257 EKESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANL-NWKGGSNAPQWK 90
E E+ IH +RDC AT W LV + NF+ + WF NL N + G+ WK
Sbjct: 739 EDETIIHTLRDCIYATQIWIKLVAFNHITNFFAFNCKDWFFKNLSNNEYGAQKEGWK 795
>ABD28505.2 RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 50.8 bits (120), Expect(2) = 5e-07
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -1
Query: 257 EKESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANLNWKG-GSNAPQWK 90
E E+ IHV+RDC +T W L+P + NF+ D +W NLN KG G N W+
Sbjct: 511 EDETVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDCREWVFNNLNKKGIGDNPATWQ 567
Score = 30.0 bits (66), Expect(2) = 5e-07
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 103 PLNGKDIWAITCYFLWFGRNKGVHDEEFRCPTHP 2
P + + TC++LW RNK + + F+ P++P
Sbjct: 563 PATWQTTFMTTCWYLWNWRNKSIFEIGFQRPSNP 596
>GAU43243.1 hypothetical protein TSUD_241340 [Trifolium subterraneum]
Length = 371
Score = 44.7 bits (104), Expect(2) = 5e-07
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 251 ESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANL-NWKGGSNAPQWK 90
E T+H +RDC W +LV E R NF+ GD W N+ N+ G N +WK
Sbjct: 188 EDTLHALRDCPQTMPIWLNLVNEHARANFFNGDLFYWINYNMSNYMGKYNGVEWK 242
Score = 36.2 bits (82), Expect(2) = 5e-07
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 91 KDIWAITCYFLWFGRNKGVHDEEFRCPTH 5
K +W + C+ LWF RNK H+E F P++
Sbjct: 242 KIMWVVACHQLWFWRNKEKHEESFSRPSN 270
>GAU31911.1 hypothetical protein TSUD_270960 [Trifolium subterraneum]
Length = 853
Score = 47.8 bits (112), Expect(2) = 8e-07
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = -1
Query: 254 KESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANLN 123
+E+ IHV+RDC +A WN ++P R FYMG+ QW NLN
Sbjct: 584 EETIIHVMRDCPIAVNFWNQVIPVVDRGVFYMGEINQWMNFNLN 627
Score = 32.3 bits (72), Expect(2) = 8e-07
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 97 NGKDIWAITCYFLWFGRNKGVHDEEFRCPTHP 2
N WA+ C+ LW RN+ +H++ F P+ P
Sbjct: 637 NWCSFWALGCFCLWKWRNQELHEDSFVRPSMP 668
>GAU51253.1 hypothetical protein TSUD_412460, partial [Trifolium subterraneum]
Length = 609
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = -1
Query: 254 KESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANLN 123
+E+T+HV+RDC +A W HL+ E R F++G QW NL+
Sbjct: 334 EETTLHVLRDCPLAVEVWQHLLEEEHRGRFFIGQLHQWIDLNLS 377
Score = 32.7 bits (73), Expect(2) = 1e-06
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 115 GVVMPLNGKDIWAITCYFLWFGRNKGVHD 29
G+ L+ +W TC++LW RNK VH+
Sbjct: 381 GIRRDLDWDAVWVTTCFWLWKWRNKRVHE 409
>GAU10179.1 hypothetical protein TSUD_416550 [Trifolium subterraneum]
Length = 557
Score = 44.3 bits (103), Expect(2) = 5e-06
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -1
Query: 257 EKESTIHVVRDCAVATFAWNHLVPESMRMNFYMGDHPQWFLANLN 123
+KE+TIHV+RDC A W ++P R F+MG+ W NLN
Sbjct: 411 KKETTIHVLRDCPKAVEVWTQVIPAQSRGPFFMGELHHW--CNLN 453
Score = 33.1 bits (74), Expect(2) = 5e-06
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 85 IWAITCYFLWFGRNKGVHDEEFRCPTHP 2
+W TC+ LW RNK + D++F P P
Sbjct: 469 LWVTTCHSLWSWRNKELFDDDFTRPYSP 496