BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00028704
         (922 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP67096.1 Retrovirus-related Pol polyprotein from transposon TN...   317   1e-98
GAU37804.1 hypothetical protein TSUD_276210, partial [Trifolium ...   303   3e-95
GAU43572.1 hypothetical protein TSUD_368960 [Trifolium subterran...   300   6e-91
KYP37906.1 Retrovirus-related Pol polyprotein from transposon TN...   301   1e-90
KYP34298.1 Retrovirus-related Pol polyprotein from transposon TN...   299   1e-90
GAU28547.1 hypothetical protein TSUD_268860 [Trifolium subterran...   299   3e-90
KYP68426.1 Retrovirus-related Pol polyprotein from transposon TN...   301   1e-89
KYP43110.1 Retrovirus-related Pol polyprotein from transposon TN...   299   4e-89
GAU28022.1 hypothetical protein TSUD_264800 [Trifolium subterran...   299   8e-89
KYP74065.1 Retrovirus-related Pol polyprotein from transposon TN...   273   8e-89
KYP42321.1 Copia protein [Cajanus cajan]                              298   1e-88
KYP51292.1 Retrovirus-related Pol polyprotein from transposon TN...   278   1e-88
GAU20491.1 hypothetical protein TSUD_130490 [Trifolium subterran...   294   4e-88
GAU29493.1 hypothetical protein TSUD_360380 [Trifolium subterran...   293   2e-87
GAU47119.1 hypothetical protein TSUD_98960 [Trifolium subterraneum]   288   4e-87
OMO88814.1 Reverse transcriptase, RNA-dependent DNA polymerase [...   284   4e-87
OMP02866.1 Reverse transcriptase, RNA-dependent DNA polymerase [...   282   9e-87
GAU16205.1 hypothetical protein TSUD_298370 [Trifolium subterran...   287   5e-86
GAU20755.1 hypothetical protein TSUD_239490 [Trifolium subterran...   286   8e-86
GAU37009.1 hypothetical protein TSUD_150450 [Trifolium subterran...   288   2e-85

>KYP67096.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 850

 Score =  317 bits (813), Expect = 1e-98
 Identities = 148/244 (60%), Positives = 188/244 (77%), Gaps = 5/244 (2%)
 Frame = +3

Query: 204  ATRVSLRNRKPPTHLQDYHCFLTTNDRPSKHPLSKY-----LSYDKLSPTHRDFSFALSS 368
            A R S R R+PP++L+DYHC L T    S HP  +Y     LSY+ LS +H+ + F++SS
Sbjct: 370  AVRHSQRERRPPSYLKDYHCTLATTGSSSNHPTVRYPISSCLSYNNLSSSHKQYIFSISS 429

Query: 369  LTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFKANGE 548
            ++EP +++EA+Q  CW++AI  EL+ALD N+TW LT L PGK  + C+WVFKVK  ++G 
Sbjct: 430  ISEPKTFEEAVQHSCWRNAINDELQALDKNQTWILTSLPPGKKLIKCKWVFKVKHYSDGS 489

Query: 549  VERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTSFLHG 728
            +ERHKARLVAKG+TQT GIDF ETFSPVVK+TT+R+LLSIA+  NWHLHQLDVNT+FLHG
Sbjct: 490  IERHKARLVAKGFTQTEGIDFMETFSPVVKMTTIRLLLSIASASNWHLHQLDVNTAFLHG 549

Query: 729  DLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQSKSDYS 908
             L+EEVYM+ PPGL      LVCKL KS+YGL+QASRQWNA+LT  L +  Y +SK+DYS
Sbjct: 550  HLNEEVYMEPPPGLELQDEKLVCKLTKSIYGLRQASRQWNARLTEVLISLDYSKSKADYS 609

Query: 909  LFTK 920
            LFTK
Sbjct: 610  LFTK 613


>GAU37804.1 hypothetical protein TSUD_276210, partial [Trifolium subterraneum]
          Length = 633

 Score =  303 bits (776), Expect = 3e-95
 Identities = 146/248 (58%), Positives = 192/248 (77%), Gaps = 11/248 (4%)
 Frame = +3

Query: 210 RVSLRNRKPPTHLQDYHCFLTTND--------RPS---KHPLSKYLSYDKLSPTHRDFSF 356
           R S RN  PPT+LQDY+C   +N          PS   K+P+S ++SY  +S  H+ +  
Sbjct: 107 RQSTRNCHPPTYLQDYYCNHLSNTIHDSSGNMEPSSSCKYPISSFISYQNISSAHKHYLL 166

Query: 357 ALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFK 536
            +S+++EP+ Y++AI ++ W+ AIQAEL AL+ N TW L  L P K ++GC+WVFK+K  
Sbjct: 167 NISTISEPTCYEKAICDENWRTAIQAELTALEKNNTWKLVSLPPHKHSIGCKWVFKLKLH 226

Query: 537 ANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTS 716
           A+G +ER+KARLVAKGYTQT GID+ +TFSPVVK+TT+R+LL+IAA++NW L+QLDVNT+
Sbjct: 227 ASGTIERYKARLVAKGYTQTEGIDYLDTFSPVVKMTTIRMLLAIAASENWPLYQLDVNTA 286

Query: 717 FLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQSK 896
           FLHGDL+EEVYM  PPGL+ S+P+LVCKL +SLYGLKQAS+QWN KLT  LT+ GY+QSK
Sbjct: 287 FLHGDLNEEVYMQPPPGLALSNPNLVCKLQRSLYGLKQASKQWNTKLTETLTSSGYVQSK 346

Query: 897 SDYSLFTK 920
           SDYSLFTK
Sbjct: 347 SDYSLFTK 354


>GAU43572.1 hypothetical protein TSUD_368960 [Trifolium subterraneum]
          Length = 998

 Score =  300 bits (768), Expect = 6e-91
 Identities = 152/255 (59%), Positives = 184/255 (72%), Gaps = 12/255 (4%)
 Frame = +3

Query: 192  PDRQATRVSLRNRKPPTHLQDYHCFLTT------NDRPS------KHPLSKYLSYDKLSP 335
            P R++ RVS     PP +LQDYHC L T      N  PS      K+PLS +LSY  LS 
Sbjct: 444  PVRKSNRVS----HPPGYLQDYHCNLITTASHDLNQSPSNSSTQCKYPLSSFLSYKDLSA 499

Query: 336  THRDFSFALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRW 515
            TH  F   +S+LTEP+SY+EA+ ++ W++AI AEL AL  N TW++T L   K  +GC+W
Sbjct: 500  THTHFVCNISTLTEPTSYEEAMHDEQWKNAISAELSALMKNNTWSMTTLPSHKKAIGCKW 559

Query: 516  VFKVKFKANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLH 695
            VFK+K   +G +ERHKARLV KG+TQT GID+ +TFSPVVK+TTVR  ++IAA + W L 
Sbjct: 560  VFKLKLHVDGSIERHKARLVVKGFTQTEGIDYIDTFSPVVKMTTVRTFMAIAAVQQWPLF 619

Query: 696  QLDVNTSFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTT 875
            QLDVNT+FLHGDLHEEVYM  PPGL    PDLVCKL +SLYGLKQASRQWNAKLT  L +
Sbjct: 620  QLDVNTAFLHGDLHEEVYMQPPPGLVLEHPDLVCKLQRSLYGLKQASRQWNAKLTETLIS 679

Query: 876  FGYLQSKSDYSLFTK 920
             GY QSK+DYSLFTK
Sbjct: 680  SGYKQSKADYSLFTK 694


>KYP37906.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1097

 Score =  301 bits (770), Expect = 1e-90
 Identities = 148/242 (61%), Positives = 184/242 (76%), Gaps = 7/242 (2%)
 Frame = +3

Query: 216  SLRNRKPPTHLQDYH-CFLTTNDRPS----KHPLSKYLSYDKLSPTHRDFSFALSSLTEP 380
            S R RK P++L DYH   LTT++ P+     + +  ++SY  LSP+ + FS ++SS+ EP
Sbjct: 583  STRPRKLPSYLHDYHHTLLTTHNSPTISQPLYSIHNHISYSNLSPSQKAFSLSISSIKEP 642

Query: 381  SSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFKANGEVERH 560
            +SY EAIQ++ W+ AIQ EL AL+ N TW LT L P K  VGC+WVFK+KF ++G +ERH
Sbjct: 643  NSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDGTIERH 702

Query: 561  KARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTSFLHGDLHE 740
            KARLVAKGYTQT G+D+ +TFSPVVK+TTVR LL++A  KNWH+HQLDVNT+FLHGDLHE
Sbjct: 703  KARLVAKGYTQTEGLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVNTTFLHGDLHE 762

Query: 741  EVYMDLPPGLSTS--SPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQSKSDYSLF 914
            EVYM  PPGL+ S    + VCKL KSLYGLKQASRQWNAKLT  L   G+ QS +DYSLF
Sbjct: 763  EVYMTPPPGLTVSPHQSNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSGFKQSMADYSLF 822

Query: 915  TK 920
            TK
Sbjct: 823  TK 824


>KYP34298.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1002

 Score =  299 bits (766), Expect = 1e-90
 Identities = 149/250 (59%), Positives = 185/250 (74%), Gaps = 7/250 (2%)
 Frame = +3

Query: 192  PDRQATRVSLRNRKPPTHLQDYH-CFLTTNDRPS----KHPLSKYLSYDKLSPTHRDFSF 356
            P     R S R RK P++L DYH   LTT++ P+     + +  ++SY  LSP+ + FS 
Sbjct: 419  PPPPFVRKSTRPRKLPSYLHDYHHTLLTTHNSPTISQPLYSIHNHISYSNLSPSQKAFSL 478

Query: 357  ALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFK 536
            ++SS+ EP+SY EAIQ++ W+ AIQ EL AL+ N TW LT L P K  VGC+WVFK+KF 
Sbjct: 479  SISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFN 538

Query: 537  ANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTS 716
            ++G +ERHKARLVAKGYTQT  +D+ +TFSPVVK+TTVR LL++A  KNWH+HQLDVNT+
Sbjct: 539  SDGTIERHKARLVAKGYTQTETLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVNTT 598

Query: 717  FLHGDLHEEVYMDLPPGLSTS--SPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQ 890
            FLHGDLHEEVYM  PPGL+ S    + VCKL KSLYGLKQASRQWNAKLT  L   G+ Q
Sbjct: 599  FLHGDLHEEVYMTPPPGLTVSPHQSNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSGFKQ 658

Query: 891  SKSDYSLFTK 920
            S +DYSLFTK
Sbjct: 659  SMADYSLFTK 668


>GAU28547.1 hypothetical protein TSUD_268860 [Trifolium subterraneum]
          Length = 1059

 Score =  299 bits (766), Expect = 3e-90
 Identities = 151/268 (56%), Positives = 192/268 (71%), Gaps = 25/268 (9%)
 Frame = +3

Query: 192  PDRQATRVSLRNRKPPTHLQDYHCFL-----------TTNDRPSKHPLSKYLSYDKLSPT 338
            P R++TR++     PP +LQD+HC L           T+N   SK+PLS ++SY  LSPT
Sbjct: 694  PLRKSTRIT----HPPGYLQDFHCNLLANTIQSSSADTSNSSTSKYPLSSFISYQHLSPT 749

Query: 339  HRDFSFALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWV 518
            H+ ++  LSSL+EP+SY++AI ++ W+ AI+ EL AL  N TW L  L   K  +GC+WV
Sbjct: 750  HQHYTLNLSSLSEPTSYEKAISDENWKGAIKTELNALMKNNTWNLVPLPSHKKAIGCKWV 809

Query: 519  FKVKFKANGEVERH--------------KARLVAKGYTQTAGIDFNETFSPVVKLTTVRV 656
            FK+K  A+G VERH              KARLVAKG+TQT G+D+ +TFSPVVK+TTVRV
Sbjct: 810  FKLKLHADGTVERHEARLLHADGTIERHKARLVAKGFTQTEGLDYMDTFSPVVKMTTVRV 869

Query: 657  LLSIAATKNWHLHQLDVNTSFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQAS 836
            L++IAA++NW L QLDVNT+FLHGDL+EEVYM  PPGL    P+LVCKL +SLYGLKQAS
Sbjct: 870  LMAIAASQNWSLFQLDVNTAFLHGDLNEEVYMQPPPGLELPQPNLVCKLQRSLYGLKQAS 929

Query: 837  RQWNAKLTHALTTFGYLQSKSDYSLFTK 920
            RQWN KLT  LT+ GY+QSK+DYSLFTK
Sbjct: 930  RQWNTKLTETLTSSGYIQSKADYSLFTK 957


>KYP68426.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1423

 Score =  301 bits (770), Expect = 1e-89
 Identities = 146/242 (60%), Positives = 178/242 (73%), Gaps = 5/242 (2%)
 Frame = +3

Query: 210  RVSLRNRKPPTHLQDYHCFLTTN-----DRPSKHPLSKYLSYDKLSPTHRDFSFALSSLT 374
            R S R +  P +LQDYHC L  +        +++P+S YL Y   S   + F   +SS+ 
Sbjct: 845  RTSQRVKNRPGYLQDYHCTLAASKVDQSSSTARYPISDYLPYTSYSAVQQSFVSTISSII 904

Query: 375  EPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFKANGEVE 554
            EP SY++AI   CW++AI+AEL ALD  KTW LT L P K  VGCRWVFKVK+ A+G VE
Sbjct: 905  EPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVE 964

Query: 555  RHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTSFLHGDL 734
            R+KARLVAKG+TQ  G+D+ +TFSPVV++TT+RV L+IAA  NW +HQLD+NT+FLHGDL
Sbjct: 965  RYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDL 1024

Query: 735  HEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQSKSDYSLF 914
             EEVYM  PPGL  SSP+ VCKL KSLYGLKQASRQWN KLT  L  FG++QSKSDYSLF
Sbjct: 1025 VEEVYMKPPPGLILSSPNKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSDYSLF 1084

Query: 915  TK 920
            TK
Sbjct: 1085 TK 1086


>KYP43110.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1353

 Score =  299 bits (766), Expect = 4e-89
 Identities = 145/242 (59%), Positives = 177/242 (73%), Gaps = 5/242 (2%)
 Frame = +3

Query: 210  RVSLRNRKPPTHLQDYHCFLTTN-----DRPSKHPLSKYLSYDKLSPTHRDFSFALSSLT 374
            R S R +  P +LQDYHC L  +        +++P+S YL Y   S   + F   +SS+ 
Sbjct: 775  RTSQRVKNRPGYLQDYHCTLAASKVDQSSSTARYPISDYLPYTSYSAVQQSFVSTISSII 834

Query: 375  EPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFKANGEVE 554
            EP SY++AI   CW++AI+AEL ALD  KTW LT L P K  VGCRWVFKVK+ A+G VE
Sbjct: 835  EPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVE 894

Query: 555  RHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTSFLHGDL 734
            R+KARLVAKG+TQ  G+D+ +TFSPVV++TT+RV L+IAA  NW +HQLD+NT+FLHGDL
Sbjct: 895  RYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDL 954

Query: 735  HEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQSKSDYSLF 914
             EEVYM  PPGL  SSP+ VCKL KSLYGLKQ SRQWN KLT  L  FG++QSKSDYSLF
Sbjct: 955  VEEVYMKPPPGLILSSPNKVCKLQKSLYGLKQVSRQWNIKLTETLKLFGFVQSKSDYSLF 1014

Query: 915  TK 920
            TK
Sbjct: 1015 TK 1016


>GAU28022.1 hypothetical protein TSUD_264800 [Trifolium subterraneum]
          Length = 1614

 Score =  299 bits (766), Expect = 8e-89
 Identities = 150/253 (59%), Positives = 187/253 (73%), Gaps = 12/253 (4%)
 Frame = +3

Query: 198  RQATRVSLRNRKPPTHLQDYHCFLTTND--------RPS----KHPLSKYLSYDKLSPTH 341
            R++TR+S    +PP  L+DYHC+  +           PS    K+PLS ++SY  +S  H
Sbjct: 585  RKSTRIS----QPPQKLKDYHCYNVSTTISHSDHATHPSSSTCKYPLSSFMSYQNISSAH 640

Query: 342  RDFSFALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVF 521
              F   LS+  EP+SY+ AI ++ W+ AI +EL AL  N TWTL  L   K T+GC+WVF
Sbjct: 641  THFIHNLSNTIEPTSYETAICDENWKKAINSELTALVKNNTWTLVPLPSHKHTIGCKWVF 700

Query: 522  KVKFKANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQL 701
            K+K  A+G +ERHKARLVAKGYTQT GID+ +TFSPVVK+TT+RVLL+IAA+ NW L+QL
Sbjct: 701  KLKLHADGTIERHKARLVAKGYTQTEGIDYMDTFSPVVKMTTIRVLLAIAASHNWPLYQL 760

Query: 702  DVNTSFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFG 881
            DVNT+FLHGDL+EEVYM  PPGL   +P+LVCKL +SLYGLKQASRQWN KLT  LT+FG
Sbjct: 761  DVNTTFLHGDLNEEVYMSPPPGLPLPAPNLVCKLQRSLYGLKQASRQWNTKLTDTLTSFG 820

Query: 882  YLQSKSDYSLFTK 920
            Y+QSKSDYSLFTK
Sbjct: 821  YVQSKSDYSLFTK 833


>KYP74065.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 233

 Score =  273 bits (699), Expect = 8e-89
 Identities = 130/191 (68%), Positives = 153/191 (80%)
 Frame = +3

Query: 348 FSFALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKV 527
           FS A+SS+ +P +Y+EAI + CW+DAI+ EL AL  N  WTLT L  GK T+GC+WVFKV
Sbjct: 1   FSLAISSIVKPKTYQEAIIDDCWKDAIERELTALSKNHPWTLTSLPEGKKTIGCKWVFKV 60

Query: 528 KFKANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDV 707
           K  ++G +ER+KARLVAKG+TQT GID+ ETFSPVVK+TT+RVLLSIAA  NW LHQLDV
Sbjct: 61  KHNSDGSIERYKARLVAKGFTQTVGIDYLETFSPVVKMTTIRVLLSIAANCNWELHQLDV 120

Query: 708 NTSFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYL 887
           NT+FLHGDL EEVYM+ PPGL  S   LVCK++KSLYGLKQASRQWN KLT  L   G+ 
Sbjct: 121 NTTFLHGDLREEVYMEPPPGLQLSDSTLVCKIEKSLYGLKQASRQWNIKLTDTLIASGFK 180

Query: 888 QSKSDYSLFTK 920
           QSK DYSLFTK
Sbjct: 181 QSKVDYSLFTK 191


>KYP42321.1 Copia protein [Cajanus cajan]
          Length = 1456

 Score =  298 bits (763), Expect = 1e-88
 Identities = 144/241 (59%), Positives = 186/241 (77%), Gaps = 3/241 (1%)
 Frame = +3

Query: 207  TRVSLRNRKPPTHLQDYHCF-LTTNDRPSK--HPLSKYLSYDKLSPTHRDFSFALSSLTE 377
            TRVS R RKPP +LQ+Y+C  L ++   S   +PLS +++Y+  SP+H  F  ++S+  E
Sbjct: 887  TRVSTRIRKPPRYLQEYYCENLASSSAASNCLYPLSSFVTYNNCSPSHTSFCLSISAQHE 946

Query: 378  PSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFKANGEVER 557
            P+S+KEA  E+CW+ A++AEL+AL+ N+TW+L RL  GK  VGC+WV++VK+K +G VER
Sbjct: 947  PTSFKEANSEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKVDGSVER 1006

Query: 558  HKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTSFLHGDLH 737
            +KARLVAKG+TQT G+D+ ETFSPVVKL+TVR LLS+AA  NW LHQLDV+ +FLHGDL 
Sbjct: 1007 YKARLVAKGFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLDVDNAFLHGDLF 1066

Query: 738  EEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQSKSDYSLFT 917
            EEVYM  PPG   S P LVCKL KSLYGLKQASRQWN KLT AL +  ++QS +D+SLF 
Sbjct: 1067 EEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQASRQWNQKLTEALISLNFIQSSTDHSLFI 1126

Query: 918  K 920
            K
Sbjct: 1127 K 1127


>KYP51292.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 369

 Score =  278 bits (710), Expect = 1e-88
 Identities = 129/209 (61%), Positives = 166/209 (79%)
 Frame = +3

Query: 294 HPLSKYLSYDKLSPTHRDFSFALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTL 473
           +PLS +++Y+  SP+H  F  ++S+  EP+S+KEA  E+CW+ A++AEL+AL+ N+TW+L
Sbjct: 17  YPLSSFVTYNNCSPSHTSFCLSISAQHEPTSFKEANSEECWRRAMEAELQALEKNQTWSL 76

Query: 474 TRLSPGKSTVGCRWVFKVKFKANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVR 653
            RL  GK  VGC+WV++VK+K +G VER+KARLVAKG+TQT G+D+ ETFSPVVKL+TVR
Sbjct: 77  VRLPEGKRPVGCKWVYRVKYKVDGSVERYKARLVAKGFTQTEGVDYFETFSPVVKLSTVR 136

Query: 654 VLLSIAATKNWHLHQLDVNTSFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQA 833
            LLS+AA  NW LHQLDV+ +FLHGDL EEVYM  PPG   S P LVCKL KSLYGLKQA
Sbjct: 137 FLLSLAAAHNWFLHQLDVDNAFLHGDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQA 196

Query: 834 SRQWNAKLTHALTTFGYLQSKSDYSLFTK 920
           SRQWN KLT AL +  ++QS +D+SLF K
Sbjct: 197 SRQWNQKLTEALISLNFIQSSTDHSLFIK 225


>GAU20491.1 hypothetical protein TSUD_130490 [Trifolium subterraneum]
          Length = 1127

 Score =  294 bits (753), Expect = 4e-88
 Identities = 145/249 (58%), Positives = 181/249 (72%), Gaps = 12/249 (4%)
 Frame = +3

Query: 210  RVSLRNRKPPTHLQDYHCFL------------TTNDRPSKHPLSKYLSYDKLSPTHRDFS 353
            R S R   PP +LQDYHC L            +T+    K+PLS +LSY  LS TH  F 
Sbjct: 589  RKSNRASHPPGYLQDYHCNLLTTPSHDLVPPTSTSSSQCKYPLSSFLSYKDLSSTHTHFV 648

Query: 354  FALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKF 533
              LS+LTEP+SY+EA+ ++ W++AI +E+ AL  N TW++T L   K  +GC+WVFK+K 
Sbjct: 649  CNLSTLTEPTSYEEAMHDEQWKNAISSEMSALMKNNTWSMTTLPSHKKAIGCKWVFKLKL 708

Query: 534  KANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNT 713
              +G +ERHKARLVAKG+TQT G+D+ +TFS VVK+TTVR  ++IAA + W L QLDVNT
Sbjct: 709  HVDGSIERHKARLVAKGFTQTEGLDYTDTFSLVVKMTTVRTFMAIAAAQQWPLFQLDVNT 768

Query: 714  SFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQS 893
            +FLHGDL+EEVYM  PPGL    PDLVCKL +SLYGLKQASRQWNAKLT  LT+ GY+QS
Sbjct: 769  AFLHGDLNEEVYMKPPPGLVLDHPDLVCKLQRSLYGLKQASRQWNAKLTETLTSSGYVQS 828

Query: 894  KSDYSLFTK 920
            K+DYSLFTK
Sbjct: 829  KADYSLFTK 837


>GAU29493.1 hypothetical protein TSUD_360380 [Trifolium subterraneum]
          Length = 1200

 Score =  293 bits (751), Expect = 2e-87
 Identities = 147/249 (59%), Positives = 180/249 (72%), Gaps = 12/249 (4%)
 Frame = +3

Query: 210  RVSLRNRKPPTHLQDYHCFLTTN---DRPS---------KHPLSKYLSYDKLSPTHRDFS 353
            R S R   PP +LQDYHC L T+   D PS         K+PLS +L+Y  LS  H  F 
Sbjct: 634  RKSTRLTNPPPYLQDYHCNLLTSTIHDSPSSADITSSSSKYPLSAFLTYQHLSLAHTHFI 693

Query: 354  FALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKF 533
              LS+++EP+SY+EA++ + W  AI+AEL AL N  TW L  L   K  +GC+WVFK+K 
Sbjct: 694  MNLSTISEPTSYEEALKNENWTSAIKAELSALMNTNTWILAPLPAHKKAIGCKWVFKLKL 753

Query: 534  KANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNT 713
             A+G VER+KARLVAKG+TQT G+D+ +TFSPVVK+TT+RVL+ +AA++NW L+QLDVNT
Sbjct: 754  HADGSVERYKARLVAKGFTQTEGLDYLDTFSPVVKMTTIRVLMVVAASQNWPLYQLDVNT 813

Query: 714  SFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQS 893
            +FLHGDL+EEVYM  PPGL    PDLVCKL +SLYGLKQASRQWN KLT  L   GY Q 
Sbjct: 814  AFLHGDLNEEVYMKPPPGLDLPQPDLVCKLQRSLYGLKQASRQWNTKLTETLIASGYTQC 873

Query: 894  KSDYSLFTK 920
            KSDYSLFTK
Sbjct: 874  KSDYSLFTK 882


>GAU47119.1 hypothetical protein TSUD_98960 [Trifolium subterraneum]
          Length = 917

 Score =  288 bits (738), Expect = 4e-87
 Identities = 142/255 (55%), Positives = 187/255 (73%), Gaps = 12/255 (4%)
 Frame = +3

Query: 192  PDRQATRVSLRNRKPPTHLQDYHC----------FLTTNDRPS--KHPLSKYLSYDKLSP 335
            P R++TR+S    KPP +LQ+YHC            TT+   S  K+PLS ++SY+ LS 
Sbjct: 427  PTRKSTRIS----KPPPYLQNYHCNHITSIVHDSSETTHQSSSNCKYPLSSFVSYNNLSS 482

Query: 336  THRDFSFALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRW 515
             H+ ++  +S++ EP++Y+EA+ +  W++ I AEL AL  N TW L +L   K  +GC+W
Sbjct: 483  AHKHYALNISTINEPNTYEEAMCDVNWRNTINAELSALMKNNTWNLVQLPTHKRAIGCKW 542

Query: 516  VFKVKFKANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLH 695
            VF +K  A+G +ERHKARLVAKG+TQT GID+ ETFSPVVK+TTVRV +++AA++NW + 
Sbjct: 543  VFNLKLHADGFIERHKARLVAKGFTQTEGIDYMETFSPVVKMTTVRVFMALAASQNWPVF 602

Query: 696  QLDVNTSFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTT 875
            QLDVNT+FLHGDL+EEVYM  PPGL+   P+LVCKL +SLYGLKQASRQWNAKLT  L  
Sbjct: 603  QLDVNTAFLHGDLNEEVYMQAPPGLALPHPNLVCKLQRSLYGLKQASRQWNAKLTETLIA 662

Query: 876  FGYLQSKSDYSLFTK 920
             G+ QSK+DYSLFTK
Sbjct: 663  SGFTQSKADYSLFTK 677


>OMO88814.1 Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
           capsularis]
          Length = 724

 Score =  284 bits (727), Expect = 4e-87
 Identities = 140/245 (57%), Positives = 181/245 (73%), Gaps = 10/245 (4%)
 Frame = +3

Query: 216 SLRNRKPPTHLQDYHCFL----------TTNDRPSKHPLSKYLSYDKLSPTHRDFSFALS 365
           S RNR+PP +LQ Y C            TT+   +++P+S +LS  +LS T+  F   ++
Sbjct: 213 SQRNRRPPPYLQYYECSKVRRQPSQSSSTTSGSGTRYPISNFLSTHRLSSTYSTFVSNIT 272

Query: 366 SLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFKANG 545
           S+ EP SY EAI++  W+ AI AEL AL+ NKTW++  L P KS VGC+WVFKVK+K++G
Sbjct: 273 SIAEPKSYSEAIKDPNWKAAIDAELHALEANKTWSIVDLPPHKSPVGCKWVFKVKYKSDG 332

Query: 546 EVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTSFLH 725
            +ER+KARLVAKGYTQ  GIDF+ETF+PV K+TTVR LL+IA+TKNW L+QLDV  + LH
Sbjct: 333 SIERYKARLVAKGYTQQEGIDFHETFAPVAKMTTVRCLLAIASTKNWPLYQLDVQNALLH 392

Query: 726 GDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQSKSDY 905
           GDL EEVYM LPPG+++   + VCKL KSLYGLKQAS QW AK + AL T+G++QS+SDY
Sbjct: 393 GDLDEEVYMSLPPGVTSKGENSVCKLHKSLYGLKQASLQWFAKFSTALLTYGFVQSRSDY 452

Query: 906 SLFTK 920
           SLF K
Sbjct: 453 SLFIK 457


>OMP02866.1 Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
           capsularis]
          Length = 666

 Score =  282 bits (721), Expect = 9e-87
 Identities = 139/245 (56%), Positives = 180/245 (73%), Gaps = 10/245 (4%)
 Frame = +3

Query: 216 SLRNRKPPTHLQDYHCFL----------TTNDRPSKHPLSKYLSYDKLSPTHRDFSFALS 365
           S RNR+PP +LQ Y C            TT+   +++P+S +LS  +LS T+  F   ++
Sbjct: 93  SQRNRRPPPYLQYYECSKVRRQPSQSSSTTSGSGTRYPISNFLSTHRLSSTYSTFVSNIT 152

Query: 366 SLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFKANG 545
           S+ EP SY EAI++  W+ AI AEL AL+ NKTW++  L P KS VGC+WVFKVK+K+ G
Sbjct: 153 SIAEPQSYSEAIKDPNWKAAIDAELHALEANKTWSIVDLPPHKSPVGCKWVFKVKYKSYG 212

Query: 546 EVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTSFLH 725
            +ER+KARLVAKGYTQ  GIDF+ETF+PV K+TTVR LL+IA+TKNW L+QLDV  + LH
Sbjct: 213 SIERYKARLVAKGYTQQEGIDFHETFAPVAKMTTVRCLLAIASTKNWPLYQLDVQNALLH 272

Query: 726 GDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQSKSDY 905
           GDL EEVYM LPPG+++   + VCKL KSLYGL+QAS QW AK + AL T+G++QS+SDY
Sbjct: 273 GDLDEEVYMSLPPGVTSKGENSVCKLHKSLYGLRQASLQWFAKFSTALLTYGFVQSRSDY 332

Query: 906 SLFTK 920
           SLF K
Sbjct: 333 SLFIK 337


>GAU16205.1 hypothetical protein TSUD_298370 [Trifolium subterraneum]
          Length = 1029

 Score =  287 bits (735), Expect = 5e-86
 Identities = 143/248 (57%), Positives = 181/248 (72%), Gaps = 11/248 (4%)
 Frame = +3

Query: 210  RVSLRNRKPPTHLQDYHCF-LTTNDRPS----------KHPLSKYLSYDKLSPTHRDFSF 356
            R   RN  PP +LQDY+C  L+T    S          K+PLS  +SY  +S  H+ + F
Sbjct: 496  RKPTRNCDPPPYLQDYYCNQLSTTIHDSSADIQSSSSCKYPLSSVISYHNISSAHKHYLF 555

Query: 357  ALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWVFKVKFK 536
             LS+++EP+ Y++AI ++ W+  I AEL AL+ N TWTL  L   K  +GC+WVFK+K  
Sbjct: 556  NLSTISEPTCYEKAICDENWKSTINAELTALEKNNTWTLVPLPSHKHAIGCKWVFKLKLH 615

Query: 537  ANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQLDVNTS 716
            ANG +ER+KARLVAKGYTQT GI++ +TFSPVVK+TT+R+ L+IAA++NW L+QLDVNT+
Sbjct: 616  ANGSIERYKARLVAKGYTQTEGINYMDTFSPVVKMTTIRMFLAIAASENWPLYQLDVNTT 675

Query: 717  FLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTFGYLQSK 896
            FLHGDL EEVYM  PPGL     +LVCKL +SLYGLKQASRQWN KLT  LT+ GY+QSK
Sbjct: 676  FLHGDLKEEVYMQPPPGLLLPHSNLVCKLQRSLYGLKQASRQWNTKLTDTLTSSGYVQSK 735

Query: 897  SDYSLFTK 920
            SDYSLFTK
Sbjct: 736  SDYSLFTK 743


>GAU20755.1 hypothetical protein TSUD_239490 [Trifolium subterraneum]
          Length = 993

 Score =  286 bits (732), Expect = 8e-86
 Identities = 146/254 (57%), Positives = 181/254 (71%), Gaps = 11/254 (4%)
 Frame = +3

Query: 192  PDRQATRVSLRNRKPPTHLQDYHCFLT-------TNDRPS----KHPLSKYLSYDKLSPT 338
            P     R S R   PPT+LQDYH  L        T   PS    K PLS  +SY+ LSP 
Sbjct: 550  PITNPLRKSNRVTHPPTYLQDYHTTLASTSHSALTATHPSSSQYKFPLSSSISYNHLSPA 609

Query: 339  HRDFSFALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRWV 518
            H+ +   LS+LTEP +Y+EA+ ++ W++ +  EL AL  NKTW L +L   K  +GC+WV
Sbjct: 610  HKHYICNLSTLTEPPTYEEAMCDEHWKNTVNVELSALLKNKTWDLVKLPLHKKAIGCKWV 669

Query: 519  FKVKFKANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLHQ 698
            FK+K  A+G +ERHKARLVAKG+TQT GID+ +TFSPVVK+TTVR+ ++IAA+++W L Q
Sbjct: 670  FKLKLHADGTIERHKARLVAKGFTQTEGIDYTDTFSPVVKMTTVRMFMAIAASQHWPLFQ 729

Query: 699  LDVNTSFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTTF 878
            LDVNT+FLHGDL+EEVYM   PGL    PDLVCKL +SLYGLKQASRQWNAKLT  L + 
Sbjct: 730  LDVNTAFLHGDLNEEVYMKPLPGLPLPHPDLVCKLQRSLYGLKQASRQWNAKLTETLISS 789

Query: 879  GYLQSKSDYSLFTK 920
            GY QSK+DYSLFTK
Sbjct: 790  GYSQSKADYSLFTK 803


>GAU37009.1 hypothetical protein TSUD_150450 [Trifolium subterraneum]
          Length = 1184

 Score =  288 bits (736), Expect = 2e-85
 Identities = 140/255 (54%), Positives = 185/255 (72%), Gaps = 12/255 (4%)
 Frame = +3

Query: 192  PDRQATRVSLRNRKPPTHLQDYHCFLTTN------------DRPSKHPLSKYLSYDKLSP 335
            P R++TR+S    KPP +L++YHC   TN                K+ LS ++SY+ LS 
Sbjct: 596  PTRKSTRIS----KPPPYLKNYHCNHLTNIVHDSSEIIHQSSSNCKYSLSSFVSYNNLSS 651

Query: 336  THRDFSFALSSLTEPSSYKEAIQEKCWQDAIQAELRALDNNKTWTLTRLSPGKSTVGCRW 515
             H+ ++  +S++ EP++Y+EA+ +  W++AI  EL AL  N TW L +L P K  +GC+W
Sbjct: 652  VHKHYALNISTINEPNTYEEAMCDVNWRNAINVELSALMKNNTWNLVQLPPHKKAIGCKW 711

Query: 516  VFKVKFKANGEVERHKARLVAKGYTQTAGIDFNETFSPVVKLTTVRVLLSIAATKNWHLH 695
            VFK+K  A+G +ERHKARLVAKG+TQT GID+ +TFSPVVK+TTVRV +++AA++NW L 
Sbjct: 712  VFKLKLHADGSIERHKARLVAKGFTQTEGIDYMDTFSPVVKMTTVRVFMALAASQNWPLF 771

Query: 696  QLDVNTSFLHGDLHEEVYMDLPPGLSTSSPDLVCKLDKSLYGLKQASRQWNAKLTHALTT 875
            QLDVNT+FLHGDL+EEVYM  PPGL+    +LVCKL +SLYGLKQASRQWNAKLT  L  
Sbjct: 772  QLDVNTAFLHGDLNEEVYMQAPPGLALPHSNLVCKLQRSLYGLKQASRQWNAKLTETLIA 831

Query: 876  FGYLQSKSDYSLFTK 920
             G+ QSK+DYSLFTK
Sbjct: 832  SGFPQSKADYSLFTK 846