BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00027616
         (821 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP40438.1 Putative ribonuclease H protein At1g65750 family, par...    69   3e-23
KYP76185.1 Putative ribonuclease H protein At1g65750 [Cajanus ca...    70   2e-21
KYP77074.1 Putative ribonuclease H protein At1g65750 [Cajanus ca...    70   2e-21
KYP44518.1 Putative ribonuclease H protein At1g65750 family, par...    68   3e-21
KYP57789.1 Putative ribonuclease H protein At1g65750 family [Caj...    66   2e-20
XP_016164673.1 PREDICTED: uncharacterized protein LOC107607211 [...    66   7e-20
KYP42324.1 Putative ribonuclease H protein At1g65750 family [Caj...    68   9e-20
KYP52893.1 Putative ribonuclease H protein At1g65750 family [Caj...    70   4e-19
GAU20014.1 hypothetical protein TSUD_273490 [Trifolium subterran...    90   5e-19
OMO81305.1 reverse transcriptase [Corchorus capsularis]                64   2e-18
KYP65493.1 Putative ribonuclease H protein At1g65750 family [Caj...    66   2e-18
GAU10638.1 hypothetical protein TSUD_421140, partial [Trifolium ...    76   2e-17
GAU36844.1 hypothetical protein TSUD_213680 [Trifolium subterran...    71   3e-17
GAU33152.1 hypothetical protein TSUD_206110 [Trifolium subterran...    74   9e-17
KYP70931.1 Putative ribonuclease H protein At1g65750 family [Caj...    62   1e-16
KYP33975.1 Putative ribonuclease H protein At1g65750 family [Caj...    59   1e-16
GAU44820.1 hypothetical protein TSUD_400390 [Trifolium subterran...    72   3e-16
KYP33915.1 Putative ribonuclease H protein At1g65750 family, par...    80   8e-16
KYP35215.1 Putative ribonuclease H protein At1g65750 family, par...    69   2e-15
KYP39537.1 Putative ribonuclease H protein At1g65750 family [Caj...    74   2e-15

>KYP40438.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
            cajan]
          Length = 1356

 Score = 68.9 bits (167), Expect(2) = 3e-23
 Identities = 40/92 (43%), Positives = 52/92 (56%)
 Frame = +2

Query: 377  FSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPCY 556
            F+ RLGTCSV+ AELW I   L       +A    +I+ESDS +AV+ +   C + +PCY
Sbjct: 1229 FAGRLGTCSVVQAELWAIFHELRIFIERGLA--DPIIIESDSALAVKFLNEGCSRENPCY 1286

Query: 557  RLVSQIHQFLGRQWRVAFHHIFRESNQVTDWL 652
             LV+ I    G    V   HI RE+NQV D L
Sbjct: 1287 SLVNLIVNMTGDNLEVKCVHILREANQVADCL 1318



 Score = 68.6 bits (166), Expect(2) = 3e-23
 Identities = 51/162 (31%), Positives = 66/162 (40%), Gaps = 32/162 (19%)
 Frame = +1

Query: 10   HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAIW 189
            H+LR+C  +K+IW            F LPL  WL  NL  +   DP W   F II+ ++W
Sbjct: 1083 HILRDCIEAKEIWRAMGTEGLLNEFFNLPLLTWLQENLTHV---DPRWCLSFVIIMDSLW 1139

Query: 190  HHRNKHVFAGETFN--------------------------------VAG*HNCPCS*A*F 273
              RN  VF    F+                                V+   N       F
Sbjct: 1140 RARNTIVFQQGNFHKTRIVGEIKGRVDEMTKVFLKEVVSDRRQDALVSVGWN-------F 1192

Query: 274  PPDG*WTKCNSDGSLAGNGVATCGGVLRDSYGRWLLPAVGHL 399
            PP+G   K N DG + GN +A CGGVLRDS G ++    G L
Sbjct: 1193 PPEG-ILKLNCDGVVDGNSIAACGGVLRDSSGNFIFAFAGRL 1233


>KYP76185.1 Putative ribonuclease H protein At1g65750 [Cajanus cajan]
          Length = 1354

 Score = 70.5 bits (171), Expect(2) = 2e-21
 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
 Frame = +2

Query: 377  FSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSL-----LIMESDSLVAVQLITGSCPQ 541
            FS  +G CSVL AELW I       +HG   +        +I+ESDS++A + +   CP+
Sbjct: 1246 FSGLIGNCSVLQAELWAI-------FHGFRLIKDKFLSYHIIIESDSVLANEFLNKGCPR 1298

Query: 542  THPCYRLVSQIHQFLGRQWRVAFHHIFRESNQVTD 646
             HP Y L++QI +  G  + V   HIFRE+NQV D
Sbjct: 1299 FHPRYSLINQIVRMAGGFYEVECVHIFREANQVAD 1333



 Score = 60.8 bits (146), Expect(2) = 2e-21
 Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 25/153 (16%)
 Frame = +1

Query: 10   HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAIW 189
            H+LR+C+ ++++W    G   +Q  F   L  WL  NL   A   P+W   F + + ++W
Sbjct: 1099 HVLRDCTFAREVWRGIMGEDVDQNFFNSQLTIWLESNLDTSA---PNWIHEFALTLDSLW 1155

Query: 190  HHRNK---------------------HVFAGETF----NVAG*HNCPCS*A*FPPDG*WT 294
             +RN                      HV +  TF     +    N        PP     
Sbjct: 1156 KNRNNFTFCQIVTNPLQVVCKIKGRMHVLSSTTFCKPRTLYQKDNRKSHIRWTPPPSNSL 1215

Query: 295  KCNSDGSLAGNGVATCGGVLRDSYGRWLLPAVG 393
            K N DG++A N  A+CGG+LRD+ G ++L   G
Sbjct: 1216 KLNCDGAVADNARASCGGILRDNNGDFILAFSG 1248


>KYP77074.1 Putative ribonuclease H protein At1g65750 [Cajanus cajan]
          Length = 277

 Score = 70.5 bits (171), Expect(2) = 2e-21
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = +2

Query: 377 FSQRLGTCSVLMAELWG-ILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPC 553
           FS  +G CSVL  E+ G ++     S+H        +I+ESDS++A + +   CP+ HPC
Sbjct: 155 FSGLIGNCSVLQVEIMGHLIKDKFLSYH--------IIIESDSVLATEFLNKGCPRFHPC 206

Query: 554 YRLVSQIHQFLGRQWRVAFHHIFRESNQVTD 646
           Y L++QI +  G  + V   HIFRE+NQV D
Sbjct: 207 YSLINQIVRMAGGFYEVECVHIFREANQVAD 237



 Score = 60.5 bits (145), Expect(2) = 2e-21
 Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 25/153 (16%)
 Frame = +1

Query: 10  HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAIW 189
           H+LR+C+ ++++W    G   +Q  F   L  WL  NL   A   P+W   F + + ++W
Sbjct: 8   HVLRDCTFAREVWRGIMGQDVDQNFFNSQLTIWLKSNLDTSA---PNWIHEFALTLDSLW 64

Query: 190 HHRNK---------------------HVFAGETF----NVAG*HNCPCS*A*FPPDG*WT 294
            +RN                      HV +  TF     +    N        PP     
Sbjct: 65  KNRNNFTFCQIVTNPLQVVCEIKGRMHVLSSTTFCKPRTLYEKDNPKSHIRWTPPPSNSL 124

Query: 295 KCNSDGSLAGNGVATCGGVLRDSYGRWLLPAVG 393
           K N DG++A N  A+CGG+LRD+ G ++L   G
Sbjct: 125 KLNCDGAVADNVRASCGGILRDNNGDFILAFSG 157


>KYP44518.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 584

 Score = 68.2 bits (165), Expect(2) = 3e-21
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
 Frame = +1

Query: 10  HLLRECSLSKQIWD-CFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAI 186
           H+LR+C  ++++W+    G    QAS G  L  WLL NLV      P W   FG+ + ++
Sbjct: 311 HVLRDCPYAQEVWNKTCRGTALMQASKG-NLETWLLKNLVRSQHLRPDWSLRFGLTLDSL 369

Query: 187 WHHRNKHVFAGETF-----------------------NVAG*HNCPCS*A*FPPDG*WTK 297
           WH RN+ VF   +                        N+        +   +PP G   K
Sbjct: 370 WHRRNRAVFQNLSISSDQLVAEIQARIAPSFSRDFNQNLGSGPLDRNTQWTYPPTG-ALK 428

Query: 298 CNSDGSLAGNGVATCGGVLRDSYGRWLLPAVGHL 399
            N DG++A NG A+CGGV+R+S G++++   G L
Sbjct: 429 LNCDGAVARNGEASCGGVVRNSNGKFVVAFSGRL 462



 Score = 62.4 bits (150), Expect(2) = 3e-21
 Identities = 37/93 (39%), Positives = 53/93 (56%)
 Frame = +2

Query: 377 FSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPCY 556
           FS RLG CS+L AEL  IL            V  ++++ESDSL A+++I   C + HPC 
Sbjct: 458 FSGRLGRCSILEAELRAILQGTRIILE--RNVGQVILVESDSLEAIRIINEGCSRVHPCC 515

Query: 557 RLVSQIHQFLGRQWRVAFHHIFRESNQVTDWLT 655
            LV +I     +  RV++ +I RE+N V D L+
Sbjct: 516 HLVREIKDLSTQLSRVSWSYINREANLVADTLS 548


>KYP57789.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 299

 Score = 66.2 bits (160), Expect(2) = 2e-20
 Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
 Frame = +1

Query: 10  HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAIW 189
           H+LR+C  +K++W    G  +   S     + W++ NL   +   P+W   F   + +IW
Sbjct: 29  HVLRDCKFAKEVWSKIPGGAAVSRSINGEFQSWIISNLTRKSQVTPNWSITFAFTLDSIW 88

Query: 190 HHRNKHVF----------AGE------TFNVAG*HNCPCS*A*F--------PPDG*WTK 297
           + RNK +F           GE      +F  A      C             PP+  + K
Sbjct: 89  YRRNKLIFQNSILSVDQVVGEIRARVNSFVAATLTGAACMRTPLFSSDHWKRPPER-FIK 147

Query: 298 CNSDGSLAGNGVATCGGVLRDSYGRWLL 381
            N DG++  +G  +CGGV+RDS GR+++
Sbjct: 148 LNGDGAVTKDGYGSCGGVVRDSEGRFII 175



 Score = 61.6 bits (148), Expect(2) = 2e-20
 Identities = 36/92 (39%), Positives = 50/92 (54%)
 Frame = +2

Query: 377 FSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPCY 556
           FS+ LG CS++ +ELW +L  L    +  +     + +ESDS  AV+LI   C + HPCY
Sbjct: 177 FSKSLGRCSIIQSELWALLLGLRLIQNHHLG--GQISIESDSKEAVKLIEEGCNRGHPCY 234

Query: 557 RLVSQIHQFLGRQWRVAFHHIFRESNQVTDWL 652
            LV  I+         +F HI RE+N V D L
Sbjct: 235 DLVKSINDLTLHFSFFSFSHIAREANLVVDKL 266


>XP_016164673.1 PREDICTED: uncharacterized protein LOC107607211 [Arachis ipaensis]
          Length = 1901

 Score = 65.9 bits (159), Expect(2) = 7e-20
 Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
 Frame = +2

Query: 374  GFSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDS----LLIMESDSLVAVQLITGSCPQ 541
            GFS  LG CS++ AELW ++       HGL    +     L +ESDS  A+  I   C  
Sbjct: 1774 GFSCNLGNCSIMHAELWAVI-------HGLSIATTKGYQCLFVESDSAEAINFINRGCSP 1826

Query: 542  THPCYRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWL 652
            THPC  LV  I     R  ++ + H  RE+N V D L
Sbjct: 1827 THPCAPLVQDIRGLAARIQKITWLHSLREANSVADLL 1863



 Score = 60.1 bits (144), Expect(2) = 7e-20
 Identities = 48/153 (31%), Positives = 68/153 (44%), Gaps = 30/153 (19%)
 Frame = +1

Query: 10   HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAIW 189
            H+LR+C  +  IW+     +   + F   L +WL  NL      + +W+ LFG+ +S+IW
Sbjct: 1628 HVLRDCPYAMSIWNRLIPPNGRSSFFNTELNEWLYQNLT----TNKNWNCLFGVALSSIW 1683

Query: 190  HHRNKHVFAGETFNV-----------------------------AG*HNCPCS*A*FPPD 282
            + RNK VF GE+ +V                             AG      S    P +
Sbjct: 1684 YLRNKLVFNGESAHVNTAVNQIKARSEEFLSLTRSSLKPQKSQAAGESLIRWS---CPEE 1740

Query: 283  G*WTKCNSDGSLAGN-GVATCGGVLRDSYGRWL 378
            G   K N DGS  G+   A CGGV R+S GR+L
Sbjct: 1741 G-CVKVNVDGSWFGHTRNAACGGVFRNSDGRFL 1772


>KYP42324.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1443

 Score = 67.8 bits (164), Expect(2) = 9e-20
 Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
 Frame = +2

Query: 374  GFSQRLGTCSVLMAELWGILTSLAWSWHGLM-----AVDSLLIMESDSLVAVQLITGSCP 538
            GF+ ++G CSVL A+LW I       +HGL      ++D  +I+ESDS VAV+ +   C 
Sbjct: 1318 GFAGKVGVCSVLQAKLWAI-------FHGLRLLKEKSIDMDIIIESDSTVAVKFLNEGCL 1370

Query: 539  QTHPCYRLVSQIHQFLGRQWRVAFHHIFRESNQVTD 646
            + HPCY LV+ I +  G    +   H+ RE+N+V +
Sbjct: 1371 REHPCYALVNLITRMAGDINYIECRHVAREANRVAN 1406



 Score = 57.8 bits (138), Expect(2) = 9e-20
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
 Frame = +1

Query: 7    SHLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAI 186
            +H+LR+C  +  +W       ++   F LPL +WL  NL    +    W ++F I + +I
Sbjct: 1171 THILRDCRFATTVWKILLQGKNDHNFFTLPLHEWLATNL---GETSGYWSKIFAIGLDSI 1227

Query: 187  WHHRNKHVF--------------------------AGETFNVAG*HNCPCS*A*FPPDG* 288
            W  RN +VF                          + +T       N   +    P  G 
Sbjct: 1228 WKTRNNYVFNHVLNQPIQVACEVTGRVTELNKSTGSLQTTEFRTTQNTNMTGWTRPSPG- 1286

Query: 289  WTKCNSDGSLAGNGVATCGGVLRDSYGRWLLPAVG 393
              K N DG++A + +A CGGV+RD+ G ++L   G
Sbjct: 1287 SIKINCDGTVASSKLAACGGVIRDNNGSFILGFAG 1321


>KYP52893.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 452

 Score = 69.7 bits (169), Expect(2) = 4e-19
 Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
 Frame = +2

Query: 374 GFSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSL-----LIMESDSLVAVQLITGSCP 538
           G+S ++  CSVL AELW I       +HGL  +        L++ESDS V V+ +   CP
Sbjct: 324 GYSGKIEICSVLQAELWAI-------YHGLRLIKEKGIGLDLLIESDSEVVVKFLNERCP 376

Query: 539 QTHPCYRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWLTGFAHSVS 676
           + H CY LV+ I +  G    ++  HIFRE+NQV D    +  S++
Sbjct: 377 REHNCYSLVNLIVKMAGGFRDLSCVHIFREANQVADSFAKYGFSIA 422



 Score = 53.5 bits (127), Expect(2) = 4e-19
 Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 26/146 (17%)
 Frame = +1

Query: 10  HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAIW 189
           HLLR+C  +  IW         +  + L L++WL  NL   +  + +W   F I + AIW
Sbjct: 178 HLLRDCDFTHVIWQRLHATSHIEEFYDLTLQEWLKFNL---SCTNKAWVCTFAIGLDAIW 234

Query: 190 HHRNKHVFAGETFN-------------------VAG*HN-------CPCS*A*FPPDG*W 291
             RN  VF+  +                     ++   N       C       PP G +
Sbjct: 235 KARNSLVFSQSSTTPNQAVCEVTGRVRELSKNLISSSFNSHIQREMCHTISWSCPPHG-F 293

Query: 292 TKCNSDGSLAGNGVATCGGVLRDSYG 369
            K NSDG +A + +A CGGV+RD  G
Sbjct: 294 LKLNSDGVVAESRIAACGGVIRDENG 319


>GAU20014.1 hypothetical protein TSUD_273490 [Trifolium subterraneum]
          Length = 159

 Score = 90.1 bits (222), Expect(2) = 5e-19
 Identities = 44/98 (44%), Positives = 61/98 (62%)
 Frame = +2

Query: 371 GGFSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHP 550
           G  ++ LG+C+VLMAELWGILT+L   W       SL   ESDS + V LI   CP +HP
Sbjct: 40  GEVARNLGSCTVLMAELWGILTTLQMVWDKGYRYVSL---ESDSAIVVSLINKGCPPSHP 96

Query: 551 CYRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWLTGFA 664
              +VS I++   + W+V   HI+R++NQV DW+  +A
Sbjct: 97  YVSIVSLINRLKMKDWQVQISHIYRQANQVADWIANYA 134



 Score = 33.1 bits (74), Expect(2) = 5e-19
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 289 WTKCNSDGSLAGN-GVATCGGVLRDSYGRWL 378
           + KCN+DG++      A CGGV+RD  G W+
Sbjct: 9   FVKCNTDGAVNQTIHKAACGGVIRDDTGAWI 39


>OMO81305.1 reverse transcriptase [Corchorus capsularis]
          Length = 1538

 Score = 63.5 bits (153), Expect(2) = 2e-18
 Identities = 36/97 (37%), Positives = 48/97 (49%)
 Frame = +2

Query: 374  GFSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPC 553
            GF   LG CS + AEL  I   L  +W+        +I E+D+L+A+ LI     + HP 
Sbjct: 1408 GFKLHLGVCSNVEAELQAIRQGLLVAWNCSYRD---IICETDALIAIDLIKNGDAKFHPL 1464

Query: 554  YRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWLTGFA 664
              L+  I Q L R+WR    H +RE N   DWL   A
Sbjct: 1465 GYLLIDIRQLLHREWRCKLQHTYREGNFCADWLANAA 1501



 Score = 57.8 bits (138), Expect(2) = 2e-18
 Identities = 51/155 (32%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
 Frame = +1

Query: 10   HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDP-SWHRLFGIIISAI 186
            H+LR+C  S+++WD F G   N  S    L QWL  NL     +D   W  +FG+ +  I
Sbjct: 1264 HILRDCPTSRKVWDYF-GKPLNSDS----LMQWLDDNLALRTLHDRVEWRIIFGVTLWRI 1318

Query: 187  WHHR-------------------NKHVFAGETFNVAG*HNCPCS*----A*FPPDG*WTK 297
            W  R                   N  V AGE       H    S        PP+    K
Sbjct: 1319 WTRRCGFVMNEGDVSLDESSLTANIMVTAGEVMKSLVNHKPLLSQDLQVRWVPPEDAVVK 1378

Query: 298  CNSDGSLAGN-GVATCGGVLRDSYGRWLLPAVGHL 399
             N+DG+  GN GVA  GGV+R + G WL+    HL
Sbjct: 1379 LNTDGAAKGNPGVAGAGGVIRSAVGSWLMGFKLHL 1413


>KYP65493.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 301

 Score = 65.9 bits (159), Expect(2) = 2e-18
 Identities = 38/92 (41%), Positives = 53/92 (57%)
 Frame = +2

Query: 377 FSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPCY 556
           +S++L  CSVL AELW IL  L      L ++ S +++ESDSL A+ L+   CP+   C 
Sbjct: 179 YSRKLDHCSVLKAELWAILQGLRLIH--LRSLGSHILIESDSLEAITLLKNGCPRQRDCS 236

Query: 557 RLVSQIHQFLGRQWRVAFHHIFRESNQVTDWL 652
            LV QI +       V++ HI RE+N V D L
Sbjct: 237 YLVQQISELAASCETVSYMHIGREANLVADLL 268



 Score = 55.1 bits (131), Expect(2) = 2e-18
 Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 30/154 (19%)
 Frame = +1

Query: 10  HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIA-DNDPSWHRLFGIIISAI 186
           H LR+   +KQ+W    G         + +++WLL +L   +     +W   F I I A+
Sbjct: 29  HALRDSISAKQVWTTMPGRIYIYHPLDINIQEWLLFHLTRRSLGGGMNWPLTFAITIDAL 88

Query: 187 WHHRNKHVF-----------------------------AGETFNVAG*HNCPCS*A*FPP 279
           W  RNK VF                             AG+   V          +  PP
Sbjct: 89  WQRRNKAVFQHSFSSTNQLISIVMNRANSIVNSNSPFDAGDQTGVTN----KLRNSNGPP 144

Query: 280 DG*WTKCNSDGSLAGNGVATCGGVLRDSYGRWLL 381
            G + K N DG+++  G ++CGG++RDS GR +L
Sbjct: 145 SG-YIKLNGDGAVSNAGTSSCGGLVRDSNGRCIL 177


>GAU10638.1 hypothetical protein TSUD_421140, partial [Trifolium subterraneum]
          Length = 236

 Score = 76.3 bits (186), Expect(2) = 2e-17
 Identities = 39/108 (36%), Positives = 59/108 (54%)
 Frame = +2

Query: 374 GFSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPC 553
           G++Q++G C  L AE+WG+ T +  +        + +I+ESDS + + ++TGSC      
Sbjct: 104 GYAQKIGACDALHAEMWGMYTGMQMARRQGF---THIIVESDSKLLIDMVTGSCKLNGKT 160

Query: 554 YRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWLTGFAHSVSMCFVRLL 697
             LV +I  F   QW + F H +RE N+  DWL  F+ S S   VR L
Sbjct: 161 PILVRRIRDFANLQWHITFKHTWREGNRCADWLANFSLSQSSFDVRNL 208



 Score = 41.6 bits (96), Expect(2) = 2e-17
 Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +1

Query: 277 PDG*WTKCNSDGSLAGN-GVATCGGVLRDSYGRWL 378
           P G W K N DG+   + G+A CGG+ RDS GRWL
Sbjct: 68  PQGEWIKLNCDGAYKESMGLAGCGGLFRDSNGRWL 102


>GAU36844.1 hypothetical protein TSUD_213680 [Trifolium subterraneum]
          Length = 1025

 Score = 71.2 bits (173), Expect(2) = 3e-17
 Identities = 38/108 (35%), Positives = 57/108 (52%)
 Frame = +2

Query: 374  GFSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPC 553
            G++ R+G C  L AE+WG+ T +  +        + LI+ESDS + + ++TG C      
Sbjct: 893  GYTLRIGDCDALHAEMWGMYTGMKMARRQGY---THLIVESDSKLLIDMVTGRCKLNGNS 949

Query: 554  YRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWLTGFAHSVSMCFVRLL 697
              LV +I      QW V F H +RE N+  DWL  F+ + S   VR+L
Sbjct: 950  PILVKRIQDLSNLQWHVIFQHTWREGNRCADWLASFSLNQSSYDVRIL 997



 Score = 45.8 bits (107), Expect(2) = 3e-17
 Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 40/163 (24%)
 Frame = +1

Query: 10   HLLRECSLSKQIWDCFSGLHSNQAS---FGLPLRQWLLHNLVP--IADNDPSWHRLFGII 174
            H LR+C  +  IW     + SNQ +        R+W+  NL      +   SW  +F ++
Sbjct: 741  HTLRDCIYATGIW--LRLVSSNQITNFFSSFDCREWIFLNLNTKNFGNQQESWKSIFMVV 798

Query: 175  ISAIWHHRNKHVFAG----------------------------------ETFNVAG*HNC 252
               IW  RNK +F                                    ET  +   +  
Sbjct: 799  CWHIWTWRNKAIFEEDFQRPNDPSQVILRMTKDIKHYKHTLMTGIRRQRETIYIGWKY-- 856

Query: 253  PCS*A*FPPDG*WTKCNSDGSLAGN-GVATCGGVLRDSYGRWL 378
                    P G W K N DG+   +  +A CGG+ RDS GRWL
Sbjct: 857  --------PHGDWIKLNCDGAYKDSMNIAGCGGLFRDSDGRWL 891


>GAU33152.1 hypothetical protein TSUD_206110 [Trifolium subterraneum]
          Length = 190

 Score = 73.9 bits (180), Expect(2) = 9e-17
 Identities = 35/99 (35%), Positives = 55/99 (55%)
 Frame = +2

Query: 374 GFSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPC 553
           G++Q++G C  L AE+WG+ T +  +        + +I+ESDS + + ++TGSC      
Sbjct: 66  GYAQKIGACDALHAEMWGMYTGMQMARRQGF---THIIVESDSKLLIDMVTGSCKLNGKT 122

Query: 554 YRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWLTGFAHS 670
             LV +I  F   QW + F H +RE N+  DWL  F+ S
Sbjct: 123 PILVRRIRDFANLQWHITFKHTWREGNRCADWLANFSLS 161



 Score = 41.6 bits (96), Expect(2) = 9e-17
 Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +1

Query: 277 PDG*WTKCNSDGSLAGN-GVATCGGVLRDSYGRWL 378
           P G W K N DG+   + G+A CGG+ RDS GRWL
Sbjct: 30  PQGEWIKLNCDGAYKESMGLAGCGGLFRDSNGRWL 64


>KYP70931.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 374

 Score = 61.6 bits (148), Expect(2) = 1e-16
 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 29/153 (18%)
 Frame = +1

Query: 10  HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAIW 189
           H+LR+   +K++W    G  +   S     + W++ NL       P+W   F   + +IW
Sbjct: 104 HVLRDYKFAKEVWSKIPGGATVSMSINGDFQSWIISNLTRNNQLTPNWSITFAFTLDSIW 163

Query: 190 HHRNKHVF--------------------------AGETF---NVAG*HNCPCS*A*FPPD 282
           H RNK +F                           GE F    +    +  C     PP+
Sbjct: 164 HRRNKLIFLNSILSVDQVVEEIRMRVDSFFAATSTGEAFMRTPLFSSDHWKC-----PPE 218

Query: 283 G*WTKCNSDGSLAGNGVATCGGVLRDSYGRWLL 381
             + K N DG++  +G  +CGGV+RDS GR+++
Sbjct: 219 R-FIKLNGDGAVTKDGYGSCGGVVRDSEGRFII 250



 Score = 53.1 bits (126), Expect(2) = 1e-16
 Identities = 33/92 (35%), Positives = 49/92 (53%)
 Frame = +2

Query: 377 FSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPCY 556
           FS+ LG  S++ +ELW +L  L    +  +     + +ESDS  AV+LI   C + HPCY
Sbjct: 252 FSKSLGRYSIIQSELWALLLGLRLIQNHHLG--GQISIESDSKEAVKLIEEGCNRGHPCY 309

Query: 557 RLVSQIHQFLGRQWRVAFHHIFRESNQVTDWL 652
            LV  I+         ++ +I RE+N V D L
Sbjct: 310 DLVKAINDLTLYLSVFSYSYIAREANLVADKL 341


>KYP33975.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 300

 Score = 58.9 bits (141), Expect(2) = 1e-16
 Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
 Frame = +2

Query: 377 FSQRLGTCSVLMAELWGILTSLAWSWHGLMAVD-----SLLIMESDSLVAVQLITGSCPQ 541
           FS++LG  S+L AELW I       + GL+ +      SL+I ESDS  AV+LI   C +
Sbjct: 178 FSKKLGCISILKAELWAI-------YQGLLIIKDRYSRSLIICESDSAEAVKLIEEGCAR 230

Query: 542 THPCYRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWL 652
            HPC+ L  QI +           HI RE+N V D L
Sbjct: 231 HHPCFGLTQQIQELSLYFSSFLCIHIPREANIVADRL 267



 Score = 55.8 bits (133), Expect(2) = 1e-16
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
 Frame = +1

Query: 10  HLLRECSLSKQIWDCFSGLHSNQASFGLPLRQWLLHNLVPIADNDPSWHRLFGIIISAIW 189
           H LR+C  + +IW   SG    ++     +  W+  NL     +  +W  LF + + ++W
Sbjct: 29  HALRDCKFAAEIWSRTSGGSLPRSFAEDNIHDWVHANLKERRPSHVNWPILFAVTLDSLW 88

Query: 190 HHRNKHVFAGE--------------TFNVAG*HNCPCS*A*-----------FPPDG*WT 294
             RNK VF                    +   H      +            FPP G   
Sbjct: 89  IRRNKMVFDNSFSSSEQVVKEINARVTTIVSIHTNNSFLSDPLCGHQDTHWRFPPIG-HI 147

Query: 295 KCNSDGSLAGNGVATCGGVLRDSYGRWLL 381
           K N DG+++ +G+  CGGV+RDS G +LL
Sbjct: 148 KLNGDGAVSNDGIGACGGVVRDSSGNFLL 176


>GAU44820.1 hypothetical protein TSUD_400390 [Trifolium subterraneum]
          Length = 198

 Score = 72.0 bits (175), Expect(2) = 3e-16
 Identities = 37/108 (34%), Positives = 58/108 (53%)
 Frame = +2

Query: 374 GFSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSLLIMESDSLVAVQLITGSCPQTHPC 553
           G++Q++G C  L AE+WG+ T +  +        + +I++SDS + + ++T SC      
Sbjct: 66  GYAQKIGACDALHAEMWGMYTGMQMARRQGF---THIIVQSDSKLLIDMVTESCKLNGKT 122

Query: 554 YRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWLTGFAHSVSMCFVRLL 697
             LV +I  F   QW + F H +RE N+  DWL  F+ S S   VR L
Sbjct: 123 PILVRRIRDFANLQWHITFKHAWREGNRCADWLANFSLSQSSFDVRNL 170



 Score = 41.6 bits (96), Expect(2) = 3e-16
 Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +1

Query: 277 PDG*WTKCNSDGSLAGN-GVATCGGVLRDSYGRWL 378
           P G W K N DG+   + G+A CGG+ RDS GRWL
Sbjct: 30  PQGEWIKLNCDGAYKESMGLAGCGGLFRDSNGRWL 64


>KYP33915.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 148

 Score = 79.7 bits (195), Expect(2) = 8e-16
 Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = +2

Query: 377 FSQRLGTCSVLMAELWGILTSLAWSWHGLMAV-----DSLLIMESDSLVAVQLITGSCPQ 541
           F+  LGTC+V+ AELW I       +HGL  +      S +I+ESDS +AV+ +   CPQ
Sbjct: 40  FAGLLGTCTVVQAELWAI-------YHGLRLIKDKFISSHIIIESDSAIAVKFLNEGCPQ 92

Query: 542 THPCYRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWLTGFA 664
            HPCY LV+ I + LG  +++   H  RE+NQV D   GFA
Sbjct: 93  AHPCYALVNHIVRMLGDFYKIECIHTLREANQVAD---GFA 130



 Score = 32.7 bits (73), Expect(2) = 8e-16
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 274 PPDG*WTKCNSDGSLAGNGVATCGGVLRDSYGRWLLPAVGHL 399
           PP     K N D +++    A+CGGVLRDS G +++   G L
Sbjct: 3   PPPPNILKLNCDRAVSNLSKASCGGVLRDSDGTFIVAFAGLL 44


>KYP35215.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan] KYP35220.1 Putative ribonuclease H protein
           At1g65750 family, partial [Cajanus cajan]
          Length = 170

 Score = 68.9 bits (167), Expect(2) = 2e-15
 Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
 Frame = +2

Query: 377 FSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSL-----LIMESDSLVAVQLITGSCPQ 541
           F   LGTCSV+ AELW I       +HGL  ++       +I+ESDS +AV+ +   C +
Sbjct: 43  FVGMLGTCSVVQAELWAI-------FHGLQIINEKGIFDPIIIESDSALAVKFLNEGCSR 95

Query: 542 THPCYRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWL 652
            +PCY LV+ I    G    V  +HIF E+NQV D L
Sbjct: 96  ENPCYSLVNLIVNMTGDNLAVDCNHIFCEANQVADCL 132



 Score = 42.4 bits (98), Expect(2) = 2e-15
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +1

Query: 271 FPPDG*WTKCNSDGSLAGNGVATCGGVLRDSYGRWLLPAVGHL 399
           FPP+G   K N DG++  N +A CGGVL+DS G ++   VG L
Sbjct: 6   FPPEG-ILKLNCDGAVNVNSIAACGGVLQDSSGNFVFAFVGML 47


>KYP39537.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 189

 Score = 74.3 bits (181), Expect(2) = 2e-15
 Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
 Frame = +2

Query: 377 FSQRLGTCSVLMAELWGILTSLAWSWHGLMAVDSL-----LIMESDSLVAVQLITGSCPQ 541
           F+  LGTCSV+ AELW I       +HGL  ++       +I+ESDS +AV+ +   C +
Sbjct: 62  FTSMLGTCSVVQAELWAI-------FHGLRIINERGISDPIIIESDSALAVKFLNEGCSR 114

Query: 542 THPCYRLVSQIHQFLGRQWRVAFHHIFRESNQVTDWL 652
            +PCY LV+ I    G    V  +HIFRE+NQV D L
Sbjct: 115 ENPCYSLVNLIVNMTGNNLDVKCNHIFREANQVADCL 151



 Score = 36.6 bits (83), Expect(2) = 2e-15
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +1

Query: 271 FPPDG*WTKCNSDGSLAGNGVATCGGVLRDSYG 369
           FPP+G   K N DG++  N +A C GVLRDS G
Sbjct: 25  FPPEG-ILKLNCDGAVDVNSIAACRGVLRDSSG 56