BLASTX nr result
ID: Glycyrrhiza30_contig00026875
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza30_contig00026875
(634 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran... 48 9e-10
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum] 49 4e-09
GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterran... 49 5e-09
GAU35447.1 hypothetical protein TSUD_364030 [Trifolium subterran... 47 7e-08
ABN09044.1 Ribonuclease H [Medicago truncatula] 52 1e-06
GAU30135.1 hypothetical protein TSUD_360280 [Trifolium subterran... 59 1e-06
GAU42016.1 hypothetical protein TSUD_236830 [Trifolium subterran... 55 2e-06
GAU48831.1 hypothetical protein TSUD_190610 [Trifolium subterran... 53 5e-06
GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum] 54 6e-06
GAU49781.1 hypothetical protein TSUD_188300 [Trifolium subterran... 55 9e-06
>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
Length = 545
Score = 47.8 bits (112), Expect(3) = 9e-10
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +1
Query: 430 LWLHWCLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHTL 609
L L W L + +L CYSDS ++L+ V H+ AA+I I + ++R W + L H L
Sbjct: 442 LVLAWELDI--KDLCCYSDSKTALKLIYDHVNEWHQYAAIIYNIKDFLSRNWRVRLVHML 499
Query: 610 RQGN 621
R+GN
Sbjct: 500 REGN 503
Score = 38.5 bits (88), Expect(3) = 9e-10
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 105 RSSGWGENASLFLAGIWTAWCARNAKCLGDEDVPLHKIIREVKTLAE 245
R+S G ++ LF+A +W WCARN C+ +E + + + LA+
Sbjct: 315 RNSIDGPSSFLFMAAVWWIWCARNQLCMDNEAISYFTLRTNTENLAQ 361
Score = 23.9 bits (50), Expect(3) = 9e-10
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 332 MVLNVDGSPQGNHG 373
M+LNVDGS GN G
Sbjct: 389 MILNVDGSSIGNPG 402
>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
Length = 724
Score = 48.5 bits (114), Expect(3) = 4e-09
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +1
Query: 430 LWLHWCLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHTL 609
L L W L + +L+CYSDS I+L+ + V H AA++ I +++ R W++ + HT
Sbjct: 621 LLLAWELNI--KDLLCYSDSATAIKLITEPVDVWHHYAAILNNIKDILNRDWQVSIFHTF 678
Query: 610 RQGN 621
R+GN
Sbjct: 679 REGN 682
Score = 34.7 bits (78), Expect(3) = 4e-09
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +3
Query: 99 EARSSGWGENAS------LFLAGIWTAWCARNAKCLGDEDVP 206
E SS W N LF+A IW W RNA CL +E +P
Sbjct: 486 EVDSSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELIP 527
Score = 24.6 bits (52), Expect(3) = 4e-09
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 296 RWIT*HLIQDSQMVLNVDGSPQGNHG 373
RW + + + M+LNVDGS GN G
Sbjct: 559 RW---NALGGTSMILNVDGSTIGNPG 581
>GAU12283.1 hypothetical protein TSUD_141910 [Trifolium subterraneum]
Length = 1049
Score = 49.3 bits (116), Expect(3) = 5e-09
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +1
Query: 430 LWLHWCLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHTL 609
L L W L + +L CYSDS + I+L+ + V H AA++ I +++ R W++ + HT
Sbjct: 946 LLLAWDLNI--KDLWCYSDSEMAIKLISESVDQWHHYAAILNNIQDILRRDWQVLILHTF 1003
Query: 610 RQGN 621
R+GN
Sbjct: 1004 REGN 1007
Score = 33.9 bits (76), Expect(3) = 5e-09
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 135 LFLAGIWTAWCARNAKCLGDEDVPLHKIIREVKTLAERSLRDVLKCSNNHN 287
LF+A IW W ARNA CL E + + + + A + C +NH+
Sbjct: 829 LFMATIWWIWRARNALCLNSESILFYSLKLRIMDYALL----IENCHSNHH 875
Score = 24.3 bits (51), Expect(3) = 5e-09
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 332 MVLNVDGSPQGNHG 373
M+LNVDGS GN G
Sbjct: 893 MILNVDGSSLGNPG 906
>GAU35447.1 hypothetical protein TSUD_364030 [Trifolium subterraneum]
Length = 526
Score = 47.4 bits (111), Expect(3) = 7e-08
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +1
Query: 430 LWLHWCLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHTL 609
L L W L + +L CYSDS I+L+ + V H AA++ I +++ R W++ + HT
Sbjct: 423 LLLAWELNI--KDLSCYSDSATTIKLITEPVDVWHHYAAILNNIKDILNRDWQVSIFHTF 480
Query: 610 RQGN 621
R+GN
Sbjct: 481 REGN 484
Score = 35.0 bits (79), Expect(3) = 7e-08
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Frame = +3
Query: 99 EARSSGWGENAS------LFLAGIWTAWCARNAKCLGDEDVP 206
E SS W N LF+A IW W RNA CL +E VP
Sbjct: 316 EVDSSSWLRNGLSCSSMFLFMAAIWWIWRTRNALCLDNELVP 357
Score = 21.2 bits (43), Expect(3) = 7e-08
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 296 RWIT*HLIQDSQMVLNVDGS 355
RW + ++ + M+LNVDGS
Sbjct: 389 RW---NALRGTSMILNVDGS 405
>ABN09044.1 Ribonuclease H [Medicago truncatula]
Length = 235
Score = 52.4 bits (124), Expect(2) = 1e-06
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = +1
Query: 436 LHWCLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHTLRQ 615
L C +G ++VC+SDS V++LV+K + H+ LI+ I +L+ R W + L HTL +
Sbjct: 131 LKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLIMAIKKLLRRDWVVSLRHTLCE 190
Query: 616 GNGS 627
GN +
Sbjct: 191 GNAA 194
Score = 27.7 bits (60), Expect(2) = 1e-06
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = +3
Query: 150 IWTAWCARNAKCLGDEDVPLHKIIREVKTLAERSLRDVLKCSNNHNSRGDGLPDT*YRTL 329
IW WC+RN KC+ ++ + I+E+ SL +LK + S P R +
Sbjct: 16 IWKIWCSRN-KCIFED---IKHSIQEIGAQVLSSLHHILKAFAHPTSHSVQQP---ARIV 68
Query: 330 RWSSTLMGALR-----EIMGQQDLGAYFVLLKE 413
W M ++ + +LG++ L+++
Sbjct: 69 SWQRPSMNSVALNVDGNVFLDSNLGSFGGLIRD 101
>GAU30135.1 hypothetical protein TSUD_360280 [Trifolium subterraneum]
Length = 479
Score = 58.5 bits (140), Expect = 1e-06
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +1
Query: 436 LHWCLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHTLRQ 615
L C G ++CYSDSLL + L+K+ V HR A I I +L+AR WE+ ++HTLR+
Sbjct: 321 LELCWERGFRKVLCYSDSLLSVNLIKEGVTPHHRFANEIHRIKKLLARDWEVTISHTLRE 380
Query: 616 GN 621
GN
Sbjct: 381 GN 382
>GAU42016.1 hypothetical protein TSUD_236830 [Trifolium subterraneum]
Length = 111
Score = 55.1 bits (131), Expect = 2e-06
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +1
Query: 436 LHWCLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHTLRQ 615
L C G +VC+SDSL + L+++ V + HR A I I +L+ R W++ + HTLR+
Sbjct: 7 LQICWEKGFRRIVCFSDSLQAVSLIREGVSAHHRSANEICSIRQLVGRDWDVIVEHTLRE 66
Query: 616 GN 621
GN
Sbjct: 67 GN 68
>GAU48831.1 hypothetical protein TSUD_190610 [Trifolium subterraneum]
Length = 259
Score = 53.1 bits (126), Expect(2) = 5e-06
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +1
Query: 427 LLWLHWCLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHT 606
+ W H G N++C SDS ++L+++ V STH A L+ I LI + W+L L HT
Sbjct: 157 IAWNH-----GFRNVICESDSQTALKLIQEGVPSTHPYAPLVNYIQSLIHKEWKLFLVHT 211
Query: 607 LRQGNGS 627
LR+GN S
Sbjct: 212 LREGNAS 218
Score = 25.0 bits (53), Expect(2) = 5e-06
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 296 RWIT*HLIQDSQMVLNVDGSPQGNHGPA 379
R ++ H ++ + +NVDGS GN GP+
Sbjct: 90 RLVSWHPPPENVIKVNVDGSSIGNQGPS 117
>GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum]
Length = 521
Score = 53.9 bits (128), Expect(2) = 6e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +1
Query: 430 LWLHWCLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHTL 609
L L W L + L CYSDS I+L+ + V H AA++L I +++AR W + +AHT
Sbjct: 418 LLLAWQLNI--KELWCYSDSETAIKLITEPVDEWHHYAAILLNIKDILAREWRVNIAHTF 475
Query: 610 RQGN 621
R+GN
Sbjct: 476 REGN 479
Score = 23.9 bits (50), Expect(2) = 6e-06
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 332 MVLNVDGSPQGNHG 373
M+LNVDGS GN G
Sbjct: 365 MILNVDGSSIGNPG 378
>GAU49781.1 hypothetical protein TSUD_188300 [Trifolium subterraneum]
Length = 221
Score = 55.1 bits (131), Expect = 9e-06
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1
Query: 445 CLRVGATNLVCYSDSLLVIELVKKMVVSTHRDAALILGIHELIARYWELELAHTLRQGN 621
C G + C SDSL V+ L++ V HR A IL I +LI R WE+ L+HTLR+GN
Sbjct: 120 CWENGYRKINCLSDSLQVVNLIRSGVSPHHRFANEILSIRQLITRDWEVVLSHTLREGN 178