BLASTX nr result

ID: Glycyrrhiza30_contig00026766 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00026766
         (260 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004507153.1 PREDICTED: pentatricopeptide repeat-containing pr...    78   2e-15
XP_013456164.1 PPR containing plant-like protein [Medicago trunc...    64   4e-10
XP_003537970.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   1e-08
XP_019454098.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   7e-08
KYP37127.1 Pentatricopeptide repeat-containing protein At3g46870...    54   1e-06
XP_006591821.1 PREDICTED: uncharacterized protein LOC100306428 i...    52   7e-06

>XP_004507153.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           [Cicer arietinum]
          Length = 261

 Score = 77.8 bits (190), Expect = 2e-15
 Identities = 41/68 (60%), Positives = 47/68 (69%), Gaps = 5/68 (7%)
 Frame = +1

Query: 70  MASRCFMKKWEIRRLASVYLGEFV--STRSSKPIRDASTPLMPSRP---FQCRRLWGFRE 234
           MASRCFM+KWE  RLASV+L E    STR S  IRD ST L  +     F+ + +WGFRE
Sbjct: 1   MASRCFMRKWETCRLASVFLTELTSNSTRCSNLIRDVSTALSSTHSIAMFEPKSVWGFRE 60

Query: 235 YHDGRPRG 258
           YHDGRPRG
Sbjct: 61  YHDGRPRG 68


>XP_013456164.1 PPR containing plant-like protein [Medicago truncatula] KEH30195.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 261

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
 Frame = +1

Query: 70  MASRCFMKKWEIRRLASVYLGEFVS--TRSSKPIRDASTPLMPSR---PFQCRRLWGFRE 234
           MA RC ++KW+  RL S +L +F S  T++  PIRD S+ L  +     F+ + + GFRE
Sbjct: 1   MALRCILRKWKTHRLTSSFLTQFTSNPTKTINPIRDISSALSSTHFITSFEHKNVTGFRE 60

Query: 235 YHDGRPRG 258
           YHDGRPRG
Sbjct: 61  YHDGRPRG 68


>XP_003537970.1 PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Glycine max] KRH29734.1 hypothetical
           protein GLYMA_11G135100 [Glycine max]
          Length = 255

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = +1

Query: 70  MASRCFMKKWEIRRLASVYLGEFVSTRSSKPIRDASTPLMPSRPFQC-RRLWGFREYHDG 246
           MASR F+K W+I   AS+ LGEF  TRS KPI+D S+  +    F   +    FR+YHDG
Sbjct: 1   MASRSFLKNWKILDFASLLLGEF--TRSIKPIKDVSSTSLTFVEFNSFKTALCFRQYHDG 58

Query: 247 RPRG 258
           RPRG
Sbjct: 59  RPRG 62


>XP_019454098.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           [Lupinus angustifolius] XP_019454099.1 PREDICTED:
           pentatricopeptide repeat-containing protein At3g46870
           [Lupinus angustifolius] OIW05740.1 hypothetical protein
           TanjilG_23526 [Lupinus angustifolius]
          Length = 254

 Score = 57.4 bits (137), Expect = 7e-08
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = +1

Query: 70  MASRCFMKKWEIRRLASVYLGEFVSTRSSKPIRDASTPLMPSRPFQCRRL-WGFREYHDG 246
           MA+R F KKW    L S +L +   TR+  PI+ +S+       FQC+ + WG REYHDG
Sbjct: 1   MATRSFFKKWRFPHLVSPFLNQL--TRTPNPIKQSSST-SDVAVFQCKTVSWGLREYHDG 57

Query: 247 RPRG 258
           RPRG
Sbjct: 58  RPRG 61


>KYP37127.1 Pentatricopeptide repeat-containing protein At3g46870 family
           [Cajanus cajan]
          Length = 257

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 35/66 (53%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +1

Query: 70  MASRCFMKKWEIRRLASVYLGEFVSTRSSKPIRDAST--PLMP-SRPFQCRRLWGFREYH 240
           MA R F  K++IR L SV +GEF  TRS KPI+DAST  PL+  S     +     R YH
Sbjct: 1   MAFRSFSNKFKIRDLGSVIVGEF--TRSRKPIKDASTSMPLVAVSESNWFKTASWLRHYH 58

Query: 241 DGRPRG 258
           DGRPRG
Sbjct: 59  DGRPRG 64


>XP_006591821.1 PREDICTED: uncharacterized protein LOC100306428 isoform X1 [Glycine
           max] KHN25233.1 Pentatricopeptide repeat-containing
           protein [Glycine soja] KRH24725.1 hypothetical protein
           GLYMA_12G058700 [Glycine max] KRH24726.1 hypothetical
           protein GLYMA_12G058700 [Glycine max] KRH24727.1
           hypothetical protein GLYMA_12G058700 [Glycine max]
          Length = 255

 Score = 52.0 bits (123), Expect = 7e-06
 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
 Frame = +1

Query: 70  MASRCFMKKWEIRRLASVYLGEFVSTRSSKPIR---DASTPLMPSRPFQCRRLWGFREYH 240
           MASR F K  + R LAS+ L EF  TRSSKPI+     S+P +    F+      FR+YH
Sbjct: 1   MASRSFFKNLKNRDLASLLLVEF--TRSSKPIKHISSTSSPFVECNSFKTASC--FRQYH 56

Query: 241 DGRPRG 258
           DGRPRG
Sbjct: 57  DGRPRG 62


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