BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00026351
         (273 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU42583.1 hypothetical protein TSUD_302990 [Trifolium subterran...   132   7e-34
KHN21319.1 Putative ribonuclease H protein, partial [Glycine soja]    122   1e-33
KHN04091.1 Putative ribonuclease H protein, partial [Glycine soja]    122   1e-33
KHN47211.1 Putative ribonuclease H protein, partial [Glycine soja]    118   1e-32
KHN15902.1 hypothetical protein glysoja_013118, partial [Glycine...   115   9e-32
KHN24737.1 Putative ribonuclease H protein, partial [Glycine soja]    108   4e-28
KYP52498.1 hypothetical protein KK1_025618 [Cajanus cajan]            113   2e-27
KYP40885.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...   105   2e-25
KYP63983.1 Transposon TX1 uncharacterized, partial [Cajanus cajan]    105   7e-25
GAU37589.1 hypothetical protein TSUD_365100 [Trifolium subterran...   105   2e-24
KYP43520.1 Putative ribonuclease H protein At1g65750 family [Caj...   101   4e-24
KYP40938.1 hypothetical protein KK1_037706, partial [Cajanus cajan]    96   2e-23
GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterran...    99   3e-22
KYP46979.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]        97   1e-21
KYP62168.1 Putative ribonuclease H protein At1g65750 family [Caj...    93   2e-21
KYP58073.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    94   3e-21
GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterran...    96   5e-21
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ...    96   5e-21
KYP38983.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]        92   8e-21
KYP70479.1 Putative ribonuclease H protein At1g65750 family, par...    95   9e-21

>GAU42583.1 hypothetical protein TSUD_302990 [Trifolium subterraneum]
          Length = 716

 Score =  132 bits (331), Expect = 7e-34
 Identities = 60/89 (67%), Positives = 76/89 (85%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VL SFCHASGLKV++QKS+FMAS NI+R K+ KF S+  F H   +GKYLGFP+L+GR+ 
Sbjct: 574 VLHSFCHASGLKVNIQKSRFMASHNISRVKVAKFESIVHFNHNSHLGKYLGFPMLSGRIK 633

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRT 7
            SDFSF++DKINGRL+GWKSKLL++AGR+
Sbjct: 634 NSDFSFIMDKINGRLDGWKSKLLSRAGRS 662


>KHN21319.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 161

 Score =  122 bits (306), Expect = 1e-33
 Identities = 56/91 (61%), Positives = 73/91 (80%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VL +FC ASGLKV++QKS+F+AS+N+ R K++KF+S+ GF  T K+ +YLGFPLL+GRV 
Sbjct: 5   VLHNFCMASGLKVNLQKSRFLASRNVARTKVDKFSSICGFHSTMKLDRYLGFPLLSGRVK 64

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           K DF F+LD I GRL GWK  +L+ AGRTTL
Sbjct: 65  KCDFDFILDHIQGRLAGWKMNMLSCAGRTTL 95


>KHN04091.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 152

 Score =  122 bits (305), Expect = 1e-33
 Identities = 55/91 (60%), Positives = 74/91 (81%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VLE+FC ASGLKV++ K+  M SK+++  K+N+F ++S FQHT +IGKY+GFP+L GRV 
Sbjct: 51  VLEAFCGASGLKVNVHKTHIMTSKHVSTIKVNRFAAISQFQHTRQIGKYMGFPMLTGRVR 110

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
            SDF+++L+KIN RL GWK KLLN+AGR TL
Sbjct: 111 NSDFNYILEKINSRLAGWKMKLLNRAGRVTL 141


>KHN47211.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 106

 Score =  118 bits (295), Expect = 1e-32
 Identities = 54/91 (59%), Positives = 71/91 (78%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VL+SFC AS LK+++ KS+F+ S N+ RQKI K+TS+ GFQ+  KI KYLGFP+L  RV 
Sbjct: 5   VLDSFCKASNLKINLHKSRFIVSSNVPRQKILKYTSILGFQYRNKIDKYLGFPILTKRVK 64

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           K DF F++D+IN +L GWK+KLLN+ GR TL
Sbjct: 65  KFDFCFIVDRINNKLGGWKAKLLNRLGRVTL 95


>KHN15902.1 hypothetical protein glysoja_013118, partial [Glycine soja]
          Length = 108

 Score =  115 bits (289), Expect = 9e-32
 Identities = 54/91 (59%), Positives = 69/91 (75%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VL++FCHASGL V++ KSKFM S N++  K++KF  +S F HT +IGKYLGFP+  GR+ 
Sbjct: 7   VLDAFCHASGLCVNIHKSKFMTSNNVSNTKVDKFKMISHFHHTKQIGKYLGFPMPKGRIK 66

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
            S F+F+LDKIN RL  WK  LLN+AGR TL
Sbjct: 67  NSVFNFVLDKINSRLARWKMNLLNRAGRVTL 97


>KHN24737.1 Putative ribonuclease H protein, partial [Glycine soja]
          Length = 170

 Score =  108 bits (270), Expect = 4e-28
 Identities = 50/91 (54%), Positives = 69/91 (75%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VL+SFC ASGLK+++ KS+F+   N+ R+KI+K+TS+ GFQ+  KI KYLGFP+L  R  
Sbjct: 39  VLDSFCKASGLKINLHKSRFIVFSNVPRRKISKYTSILGFQYMNKIDKYLGFPILTRRAK 98

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
             DF F++D+IN +L GWK+KLLN+  R TL
Sbjct: 99  IYDFCFVVDRINSKLVGWKAKLLNRPMRVTL 129


>KYP52498.1 hypothetical protein KK1_025618 [Cajanus cajan]
          Length = 538

 Score =  113 bits (282), Expect = 2e-27
 Identities = 54/91 (59%), Positives = 68/91 (74%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VL+ FC  S LKV++QKS+F  S NI+R++I+KFTS+  F HT  + KYLGFPL  GRV 
Sbjct: 432 VLDIFCEDSSLKVNIQKSRFFTSSNISRRQISKFTSIIHFHHTVDLDKYLGFPLHKGRVR 491

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
            SDFS ++D ING+L GWKSK LN+ GR TL
Sbjct: 492 NSDFSHIVDIINGKLTGWKSKTLNRDGRVTL 522


>KYP40885.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 338

 Score =  105 bits (262), Expect = 2e-25
 Identities = 48/91 (52%), Positives = 66/91 (72%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VLESFCH SGLK+ +QKS+ +ASK +T Q+    T+V+  + T +I  YLGFP+  GR+ 
Sbjct: 213 VLESFCHMSGLKISIQKSRALASKGVTSQRKEAITTVTQIRITSRIENYLGFPMFQGRIH 272

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           + DF  L++++N +L GWKS LLNKAGR TL
Sbjct: 273 RRDFMALIERVNSKLTGWKSALLNKAGRVTL 303


>KYP63983.1 Transposon TX1 uncharacterized, partial [Cajanus cajan]
          Length = 443

 Score =  105 bits (262), Expect = 7e-25
 Identities = 48/91 (52%), Positives = 66/91 (72%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VLESFCH SGLK+ +QKS+ +ASK +T Q+    T+V+  + T +I  YLGFP+  GR+ 
Sbjct: 296 VLESFCHMSGLKISIQKSRALASKGVTSQRKEAITTVTQIRITSRIENYLGFPMFQGRIH 355

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           + DF  L++++N +L GWKS LLNKAGR TL
Sbjct: 356 RRDFMALIERVNSKLTGWKSALLNKAGRVTL 386


>GAU37589.1 hypothetical protein TSUD_365100 [Trifolium subterraneum]
          Length = 648

 Score =  105 bits (261), Expect = 2e-24
 Identities = 46/91 (50%), Positives = 67/91 (73%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           +  +F  ASGL+++  KS+ + SK +TR+K++K T++S  + T  +GKYLGFP+++GR  
Sbjct: 262 LFNNFSKASGLRINCAKSRALFSKGVTRRKVDKMTTLSNIRSTTSLGKYLGFPMISGRAK 321

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           K DF+F+LDKIN RL  WK+K LNK GR TL
Sbjct: 322 KEDFNFILDKINSRLASWKNKFLNKLGRVTL 352


>KYP43520.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 282

 Score =  101 bits (251), Expect = 4e-24
 Identities = 47/91 (51%), Positives = 64/91 (70%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           +L  F HA GL+V++QK+KF  S+NI   KINKF ++  F  T  I KYLGFP+L G++ 
Sbjct: 55  ILNDFGHALGLQVNLQKTKFYTSRNIHCTKINKFRNIYIFSPTIDIDKYLGFPILIGKIK 114

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           K+DF F+ DK++ RL GWK  L++KAGR  L
Sbjct: 115 KADFKFIFDKLHSRLAGWKMSLISKAGRVVL 145


>KYP40938.1 hypothetical protein KK1_037706, partial [Cajanus cajan]
          Length = 152

 Score = 96.3 bits (238), Expect = 2e-23
 Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = -1

Query: 261 FCHASGLKVDMQKSKFMA-SKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVTKSD 85
           FC  SGLKV++ KS+ +A S N+  +K+ KFTS+  FQHT  + KY GFPLL  RV    
Sbjct: 1   FCKDSGLKVNIYKSRTLAFSNNVPGRKLMKFTSIIEFQHTMNLDKYFGFPLLKCRVCNRH 60

Query: 84  FSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           F+ ++D+ING+L GWK+K LN+AG+ TL
Sbjct: 61  FAHIVDRINGKLEGWKNKTLNRAGKVTL 88


>GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterraneum]
          Length = 902

 Score = 99.0 bits (245), Expect = 3e-22
 Identities = 46/91 (50%), Positives = 61/91 (67%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           + + F  ASGLK+++ KS+   S  I   KINK TS+SG + T  + KYLGFP+L GR  
Sbjct: 430 LFDHFSRASGLKINLSKSRAFYSAGIPHTKINKLTSISGIRSTVSLDKYLGFPILKGRAK 489

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           +SDF F++DK+  RL  WK+KLLNK GR  L
Sbjct: 490 RSDFHFIIDKMQSRLASWKNKLLNKLGRLAL 520


>KYP46979.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]
          Length = 887

 Score = 97.4 bits (241), Expect = 1e-21
 Identities = 43/90 (47%), Positives = 61/90 (67%)
 Frame = -1

Query: 270 LESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVTK 91
           LE FC ASGLK++ QKSKF+ SKNI+  ++ +   + G +    +GKYLG  L++GR T 
Sbjct: 583 LEEFCRASGLKINQQKSKFVCSKNISNSRLEELEKLLGIKKANSLGKYLGHNLISGRATN 642

Query: 90  SDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
            DF  +++K+  R+  WK KLLN+AGRT L
Sbjct: 643 KDFEHVINKVRSRIASWKGKLLNRAGRTCL 672


>KYP62168.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 229

 Score = 93.2 bits (230), Expect = 2e-21
 Identities = 42/91 (46%), Positives = 61/91 (67%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           VLE+FC ASGLK++++KSKF+ SK +   +I +     G +HT +  +YLG P+  G+  
Sbjct: 4   VLENFCTASGLKINLEKSKFVVSKGVPSARIEQLEQTLGIEHTPRFKRYLGIPMFHGKAK 63

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
            +DF  ++D+IN RL  WK +LLNKAGR  L
Sbjct: 64  IADFHHVIDRINDRLATWKGRLLNKAGRLCL 94


>KYP58073.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 291

 Score = 94.0 bits (232), Expect = 3e-21
 Identities = 41/90 (45%), Positives = 61/90 (67%)
 Frame = -1

Query: 270 LESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVTK 91
           LE FC ASGLK++ QKSKF+ SK I   ++ +  ++ G + +  +GKYLG  L++G+ T 
Sbjct: 183 LEDFCRASGLKINQQKSKFVCSKKIINSRLEELENLLGIKKSNSVGKYLGHILISGKATN 242

Query: 90  SDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
            DF  +++K+  R+  WK KLLN+AGRT L
Sbjct: 243 KDFEHVINKVRSRIASWKGKLLNRAGRTCL 272


>GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterraneum]
          Length = 1075

 Score = 95.5 bits (236), Expect = 5e-21
 Identities = 44/91 (48%), Positives = 63/91 (69%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           + + F  ASGLK+++ KS+   S  I + KINK TS+SG + T  + KYLGFP+L GR  
Sbjct: 503 LFDRFGLASGLKINLSKSRAFYSSGIPQAKINKLTSLSGIRSTVSLDKYLGFPILKGRAK 562

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           ++DF+F++DK+  RL  WK++LLNK GR  L
Sbjct: 563 RNDFNFIIDKMQSRLASWKNRLLNKPGRLAL 593


>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 95.5 bits (236), Expect = 5e-21
 Identities = 44/91 (48%), Positives = 62/91 (68%)
 Frame = -1

Query: 273 VLESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVT 94
           + + F  ASGLK+++ KS+   S      KIN  T++SG Q T  +GKYLGFP+L GR  
Sbjct: 704 LFDRFSRASGLKINISKSRAYYSSGTPNGKINNLTAISGIQSTTTLGKYLGFPMLQGRPK 763

Query: 93  KSDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           +SDF+F+L+K+  RL  WK++LLN+ GR TL
Sbjct: 764 RSDFNFILEKMQTRLASWKNRLLNRTGRLTL 794


>KYP38983.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]
          Length = 254

 Score = 92.0 bits (227), Expect = 8e-21
 Identities = 43/90 (47%), Positives = 63/90 (70%)
 Frame = -1

Query: 270 LESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVTK 91
           LE F  +SGL+V++ KSKF++S+ +++++I     + G  HT +IGKYLG P+  G+   
Sbjct: 136 LEEFSRSSGLRVNLTKSKFVSSRRVSQRRIEAMEGLLGIGHTAQIGKYLGVPMTHGQPRC 195

Query: 90  SDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           +DF  ++DKI GRL  WKSKLLNKAG+  L
Sbjct: 196 ADFYDVMDKIQGRLAAWKSKLLNKAGKLCL 225


>KYP70479.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 585

 Score = 94.7 bits (234), Expect = 9e-21
 Identities = 45/90 (50%), Positives = 63/90 (70%)
 Frame = -1

Query: 270 LESFCHASGLKVDMQKSKFMASKNITRQKINKFTSVSGFQHTCKIGKYLGFPLLAGRVTK 91
           LE F  ASGL+V++ KSKF++S+ ++R++I+    + G  HT +IGKYLG P+  G+   
Sbjct: 254 LEEFSRASGLRVNLAKSKFVSSRKVSRRRIDTLEGLLGIDHTARIGKYLGVPMTHGQPRC 313

Query: 90  SDFSFLLDKINGRLNGWKSKLLNKAGRTTL 1
           +DF  +LDKI  RL  WKSKLLNKAG+  L
Sbjct: 314 ADFYDVLDKIQSRLAAWKSKLLNKAGKLCL 343