BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00026164
         (244 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_006023182.1 MULTISPECIES: conjugal transfer protein TrbA [Rhi...   155   4e-42
WP_064033317.1 Ti-type conjugative transfer relaxase TraA, parti...   151   3e-41
WP_014891370.1 conjugal transfer protein TrbA [Methylocystis sp....   151   6e-41
WP_024880391.1 conjugal transfer protein TraA [Methylosinus sp. ...   151   6e-41
WP_024849971.1 conjugal transfer protein TraA [Aminobacter sp. J41]   150   2e-40
WP_004448214.1 MULTISPECIES: conjugal transfer protein TrbA [Met...   149   4e-40
WP_024880265.1 conjugal transfer protein TraA [Methylosinus sp. ...   148   1e-39
WP_072461971.1 Ti-type conjugative transfer relaxase TraA [Parac...   147   1e-39
BAR99450.1 Conjugal transfer protein TraA [Blastochloris viridis]     144   3e-39
ALK10594.1 ATP-dependent RecD-like DNA helicase [Blastochloris v...   144   3e-39
WP_037153586.1 conjugal transfer protein TraA [Rhizobium sp. YS-...   145   7e-39
WP_050743145.1 MULTISPECIES: conjugal transfer protein TraA [Shi...   145   9e-39
OJU44864.1 Ti-type conjugative transfer relaxase TraA [Alphaprot...   144   3e-38
WP_053553423.1 conjugal transfer protein TraA [Sphingopyxis sp. ...   144   3e-38
WP_011746450.1 conjugal transfer protein TrbA [Paracoccus denitr...   144   3e-38
WP_072819658.1 Ti-type conjugative transfer relaxase TraA [Brady...   143   4e-38
WP_046847110.1 conjugal transfer protein TraA [Hyphomicrobium sp...   143   4e-38
WP_026606167.1 conjugal transfer protein TraA [Methylocapsa acid...   143   6e-38
WP_018631405.1 conjugal transfer protein TrbA [Meganema peridero...   143   6e-38
WP_036750893.1 conjugal transfer protein TraA [Paracoccus versut...   142   1e-37

>WP_006023182.1 MULTISPECIES: conjugal transfer protein TrbA [Rhizobiales]
           ABS65530.1 Ti-type conjugative transfer relaxase TraA
           [Xanthobacter autotrophicus Py2] ABS67894.1 Ti-type
           conjugative transfer relaxase TraA [Xanthobacter
           autotrophicus Py2] EKS34571.1 Ti-type conjugative
           transfer relaxase TraA [Afipia broomeae ATCC 49717]
          Length = 976

 Score =  155 bits (391), Expect = 4e-42
 Identities = 79/80 (98%), Positives = 79/80 (98%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEVGDRDRETALARAE RGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE
Sbjct: 326 RHEVGDRDRETALARAEARGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 386 AWEAAGYEVRGVALSGIAAE 405


>WP_064033317.1 Ti-type conjugative transfer relaxase TraA, partial [Methylosinus
           sp. R-45379] OAI27106.1 conjugal transfer protein TraA,
           partial [Methylosinus sp. R-45379]
          Length = 649

 Score =  151 bits (382), Expect = 3e-41
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEVGDRDRE ALARAE RGLVLSGEQA+ALAH+TDGRDLGVVVGYAGTGKSAMLGVARE
Sbjct: 326 RHEVGDRDREAALARAEARGLVLSGEQADALAHVTDGRDLGVVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 386 AWEAAGYEVRGVALSGIAAE 405


>WP_014891370.1 conjugal transfer protein TrbA [Methylocystis sp. SC2] CCJ07341.1
           Ti-type conjugative transfer relaxase TraA
           [Methylocystis sp. SC2]
          Length = 974

 Score =  151 bits (382), Expect = 6e-41
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEVGDRDRE ALARAE RGLVLSGEQA+ALAH+TDGRDLGVVVGYAGTGKSAMLGVARE
Sbjct: 326 RHEVGDRDREAALARAEARGLVLSGEQADALAHVTDGRDLGVVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 386 AWEAAGYEVRGVALSGIAAE 405


>WP_024880391.1 conjugal transfer protein TraA [Methylosinus sp. LW3]
          Length = 978

 Score =  151 bits (382), Expect = 6e-41
 Identities = 76/80 (95%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEVGDRDRE ALARAE RGLVLSGEQA+ALAH+TDGRDLGVVVGYAGTGKSAMLGVARE
Sbjct: 326 RHEVGDRDREAALARAEARGLVLSGEQADALAHVTDGRDLGVVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 386 AWEAAGYEVRGVALSGIAAE 405


>WP_024849971.1 conjugal transfer protein TraA [Aminobacter sp. J41]
          Length = 996

 Score =  150 bits (378), Expect = 2e-40
 Identities = 75/80 (93%), Positives = 77/80 (96%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEV DRDRE ALARAE RGLVLSGEQAEALAH+TDGRDLG+VVGYAGTGKSAMLGVARE
Sbjct: 331 RHEVSDRDREAALARAEQRGLVLSGEQAEALAHVTDGRDLGIVVGYAGTGKSAMLGVARE 390

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 391 AWEAAGYEVRGVALSGIAAE 410


>WP_004448214.1 MULTISPECIES: conjugal transfer protein TrbA [Methylosinus]
           OBS53723.1 Ti-type conjugative transfer relaxase TraA
           [Methylosinus sp. 3S-1]
          Length = 971

 Score =  149 bits (376), Expect = 4e-40
 Identities = 75/80 (93%), Positives = 77/80 (96%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEVGDRDRE ALARAE RGLVLSGEQA+ALAH+TDGRDLGVVVGYAGTGKSAML VARE
Sbjct: 326 RHEVGDRDREAALARAEARGLVLSGEQADALAHVTDGRDLGVVVGYAGTGKSAMLAVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 386 AWEAAGYEVRGVALSGIAAE 405


>WP_024880265.1 conjugal transfer protein TraA [Methylosinus sp. LW3]
          Length = 977

 Score =  148 bits (373), Expect = 1e-39
 Identities = 74/80 (92%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEVGDRDRE ALARAE RGL LSGEQA+ALAH+TDGRDLGVVVGYAGTGKSAMLGVARE
Sbjct: 326 RHEVGDRDREAALARAEARGLFLSGEQADALAHVTDGRDLGVVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRG ALSGIAAE
Sbjct: 386 AWEAAGYEVRGAALSGIAAE 405


>WP_072461971.1 Ti-type conjugative transfer relaxase TraA [Paracoccus
           pantotrophus] SFX77798.1 plasmid mobilization system
           relaxase [Paracoccus pantotrophus]
          Length = 992

 Score =  147 bits (372), Expect = 1e-39
 Identities = 74/80 (92%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEV DRDRE AL RAE RGLVLSGEQA+ALAHITDGRDLG+VVGYAGTGKSAMLGVARE
Sbjct: 326 RHEVSDRDREAALTRAEQRGLVLSGEQADALAHITDGRDLGIVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 386 AWEAAGYEVRGVALSGIAAE 405


>BAR99450.1 Conjugal transfer protein TraA [Blastochloris viridis]
          Length = 531

 Score =  144 bits (364), Expect = 3e-39
 Identities = 73/80 (91%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEV D DR+ ALARAE RGLVLSGEQA+ALAH+TDGRDLGVVVGYAGTGKSAMLGVARE
Sbjct: 63  RHEVNDADRKAALARAELRGLVLSGEQADALAHVTDGRDLGVVVGYAGTGKSAMLGVARE 122

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 123 AWEAAGYEVRGVALSGIAAE 142


>ALK10594.1 ATP-dependent RecD-like DNA helicase [Blastochloris viridis]
           CUU43257.1 conjugal transfer relaxase TraA
           [Blastochloris viridis]
          Length = 533

 Score =  144 bits (364), Expect = 3e-39
 Identities = 73/80 (91%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEV D DR+ ALARAE RGLVLSGEQA+ALAH+TDGRDLGVVVGYAGTGKSAMLGVARE
Sbjct: 65  RHEVNDADRKAALARAELRGLVLSGEQADALAHVTDGRDLGVVVGYAGTGKSAMLGVARE 124

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 125 AWEAAGYEVRGVALSGIAAE 144


>WP_037153586.1 conjugal transfer protein TraA [Rhizobium sp. YS-1r] KGD96677.1
           conjugal transfer protein TraA [Rhizobium sp. YS-1r]
          Length = 1012

 Score =  145 bits (367), Expect = 7e-39
 Identities = 73/80 (91%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEV DRDR  ALARAE RGLVLSGEQA+ALAH+TDGRDLG+VVGYAGTGKSAMLGVARE
Sbjct: 338 RHEVNDRDRIAALARAEQRGLVLSGEQADALAHVTDGRDLGIVVGYAGTGKSAMLGVARE 397

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 398 AWEAAGYEVRGVALSGIAAE 417


>WP_050743145.1 MULTISPECIES: conjugal transfer protein TraA [Shinella] KNY18507.1
           conjugal transfer protein TraA [Shinella sp. SUS2]
           KOC77677.1 conjugal transfer protein TraA [Shinella sp.
           GWS1]
          Length = 984

 Score =  145 bits (366), Expect = 9e-39
 Identities = 72/79 (91%), Positives = 75/79 (94%)
 Frame = +3

Query: 6   HEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVAREA 185
           HEV DRDRE AL RAE RGLVLSGEQA+ALAH+TDGRDLG+VVGYAGTGKSAMLGVAREA
Sbjct: 327 HEVSDRDREAALVRAEQRGLVLSGEQADALAHVTDGRDLGIVVGYAGTGKSAMLGVAREA 386

Query: 186 WEAAGYEVRGVALSGIAAE 242
           WEAAGYEVRGVALSGIAAE
Sbjct: 387 WEAAGYEVRGVALSGIAAE 405


>OJU44864.1 Ti-type conjugative transfer relaxase TraA [Alphaproteobacteria
           bacterium 65-37]
          Length = 979

 Score =  144 bits (362), Expect = 3e-38
 Identities = 73/80 (91%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RH V D DRE+ALARAE RGLVLSGEQAEALAH+TDGRDLGVVVGYAGTGKSAMLGVARE
Sbjct: 326 RHGVRDADRESALARAEARGLVLSGEQAEALAHVTDGRDLGVVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGY+VRGVALSGIAAE
Sbjct: 386 AWEAAGYDVRGVALSGIAAE 405


>WP_053553423.1 conjugal transfer protein TraA [Sphingopyxis sp. 113P3] ALC11514.1
           conjugal transfer protein TraA [Sphingopyxis sp. 113P3]
          Length = 991

 Score =  144 bits (362), Expect = 3e-38
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = +3

Query: 6   HEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVAREA 185
           HEV DRDRE ALARAE RGL+LSGEQA+ALAH+TDGRDLG+VVGYAGTGKSAMLGVAREA
Sbjct: 327 HEVSDRDREAALARAEERGLILSGEQADALAHVTDGRDLGIVVGYAGTGKSAMLGVAREA 386

Query: 186 WEAAGYEVRGVALSGIAAE 242
           WE+AGYEVRG ALSGIAAE
Sbjct: 387 WESAGYEVRGAALSGIAAE 405


>WP_011746450.1 conjugal transfer protein TrbA [Paracoccus denitrificans]
           ABL68217.1 plasmid mobilization system relaxase
           [Paracoccus denitrificans PD1222] SDJ60165.1 plasmid
           mobilization system relaxase [Paracoccus denitrificans]
           SFR20112.1 plasmid mobilization system relaxase
           [Paracoccus denitrificans]
          Length = 998

 Score =  144 bits (362), Expect = 3e-38
 Identities = 72/80 (90%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEV D +RE ALARAE RGLVLSGEQA+ALAH+TDGRDLG+VVGYAGTGKSAMLGVARE
Sbjct: 326 RHEVSDWNREAALARAEQRGLVLSGEQADALAHVTDGRDLGIVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 386 AWEAAGYEVRGVALSGIAAE 405


>WP_072819658.1 Ti-type conjugative transfer relaxase TraA [Bradyrhizobium
           erythrophlei] SHN78252.1 plasmid mobilization system
           relaxase [Bradyrhizobium erythrophlei]
          Length = 998

 Score =  143 bits (361), Expect = 4e-38
 Identities = 71/80 (88%), Positives = 76/80 (95%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEV DRDRE ALARAE RGLVLSGEQA+ALAH+TDGRDLGVV+G+AGTGKSAMLGVARE
Sbjct: 330 RHEVRDRDREAALARAEERGLVLSGEQADALAHVTDGRDLGVVIGHAGTGKSAMLGVARE 389

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGY+ RGVALSGIAAE
Sbjct: 390 AWEAAGYDARGVALSGIAAE 409


>WP_046847110.1 conjugal transfer protein TraA [Hyphomicrobium sp. GJ21] CEJ86416.1
           putative Conjugal transfer protein, traA [Hyphomicrobium
           sp. GJ21]
          Length = 1002

 Score =  143 bits (361), Expect = 4e-38
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RHEV + DRE AL RAE RGLVLSGEQA+ALAH+TDGRDLG+VVGYAGTGKSAMLGVARE
Sbjct: 326 RHEVNEADREAALTRAEQRGLVLSGEQADALAHVTDGRDLGIVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 386 AWEAAGYEVRGVALSGIAAE 405


>WP_026606167.1 conjugal transfer protein TraA [Methylocapsa acidiphila]
          Length = 976

 Score =  143 bits (360), Expect = 6e-38
 Identities = 73/80 (91%), Positives = 74/80 (92%)
 Frame = +3

Query: 3   RHEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVARE 182
           RH V D DRE ALARAE RGLVLSGEQAEAL H+TDGRDLGVVVGYAGTGKSAMLGVARE
Sbjct: 326 RHGVRDADREAALARAEARGLVLSGEQAEALTHVTDGRDLGVVVGYAGTGKSAMLGVARE 385

Query: 183 AWEAAGYEVRGVALSGIAAE 242
           AWEAAGYEVRGVALSGIAAE
Sbjct: 386 AWEAAGYEVRGVALSGIAAE 405


>WP_018631405.1 conjugal transfer protein TrbA [Meganema perideroedes]
          Length = 992

 Score =  143 bits (360), Expect = 6e-38
 Identities = 69/79 (87%), Positives = 76/79 (96%)
 Frame = +3

Query: 6   HEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVAREA 185
           HEV DRDR+ A+ARAE RGL+LSGEQA+ALAH+TDGRDLGV+VGYAGTGKSAMLGVAREA
Sbjct: 327 HEVSDRDRQAAIARAEQRGLILSGEQADALAHVTDGRDLGVIVGYAGTGKSAMLGVAREA 386

Query: 186 WEAAGYEVRGVALSGIAAE 242
           WEAAG+EVRGVALSGIAAE
Sbjct: 387 WEAAGFEVRGVALSGIAAE 405


>WP_036750893.1 conjugal transfer protein TraA [Paracoccus versutus] KGJ12029.1
           conjugal transfer protein TraA [Paracoccus versutus]
          Length = 1002

 Score =  142 bits (358), Expect = 1e-37
 Identities = 70/79 (88%), Positives = 76/79 (96%)
 Frame = +3

Query: 6   HEVGDRDRETALARAEPRGLVLSGEQAEALAHITDGRDLGVVVGYAGTGKSAMLGVAREA 185
           HEV +RDRE ALARAE RGLVLSGEQA+ALAH+TDGRDLG+VVGYAGTGKSAMLGVAREA
Sbjct: 327 HEVSNRDREAALARAEQRGLVLSGEQADALAHVTDGRDLGIVVGYAGTGKSAMLGVAREA 386

Query: 186 WEAAGYEVRGVALSGIAAE 242
           WEA+G+EVRGVALSGIAAE
Sbjct: 387 WEASGFEVRGVALSGIAAE 405