BLASTX nr result

ID: Glycyrrhiza30_contig00025313 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00025313
         (322 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004495637.1 PREDICTED: putative pentatricopeptide repeat-cont...    72   2e-12
XP_003591223.1 PPR containing plant-like protein [Medicago trunc...    72   2e-12
GAU21550.1 hypothetical protein TSUD_35130 [Trifolium subterraneum]    63   1e-09
XP_016179919.1 PREDICTED: putative pentatricopeptide repeat-cont...    54   3e-06
XP_015947106.1 PREDICTED: putative pentatricopeptide repeat-cont...    54   3e-06

>XP_004495637.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Cicer arietinum]
          Length = 607

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 33/46 (71%), Positives = 39/46 (84%)
 Frame = +2

Query: 185 MMACGRKLLCPTDFRPIPLMVQNSLRCAQLNAPFSPKDLTGLSTDL 322
           MMA  RKLL PTDF P+PL VQNSLRC +LN+PFSPK +TG++TDL
Sbjct: 1   MMAFCRKLLSPTDFLPLPLSVQNSLRCIELNSPFSPKGITGITTDL 46


>XP_003591223.1 PPR containing plant-like protein [Medicago truncatula] AES61474.1
           PPR containing plant-like protein [Medicago truncatula]
          Length = 606

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = +2

Query: 188 MACGRKLLCPTDFRPIPLMVQNSLRCAQLNAPFSPKDLTGLSTDL 322
           MAC RKLL  T+FRPIP  VQNSLRC Q + PF+PKDLTGL+TDL
Sbjct: 3   MACSRKLLSSTNFRPIPFSVQNSLRCIQNDTPFNPKDLTGLTTDL 47


>GAU21550.1 hypothetical protein TSUD_35130 [Trifolium subterraneum]
          Length = 242

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 35/47 (74%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
 Frame = +2

Query: 188 MACGRKLL-CPTDFRPIPLMVQNSLRCA-QLNAPFSPKDLTGLSTDL 322
           MAC RKLL   T FRPIPL V+NSLR +  LNAPFSPKDLTGL+TDL
Sbjct: 1   MACSRKLLQSSTHFRPIPLSVRNSLRRSIHLNAPFSPKDLTGLTTDL 47


>XP_016179919.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Arachis ipaensis]
          Length = 608

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
 Frame = +2

Query: 185 MMACGRKLLCPTDFRPIPLMVQNSLR-CAQLN--APFSPKDLTGLSTDL 322
           MM   RKLL PT FRPIP +V NSL    QLN  APF PKD++GL+TDL
Sbjct: 1   MMTGTRKLLSPTHFRPIPTIVHNSLADDTQLNSIAPFCPKDISGLATDL 49


>XP_015947106.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Arachis duranensis]
          Length = 608

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
 Frame = +2

Query: 185 MMACGRKLLCPTDFRPIPLMVQNSLR-CAQLN--APFSPKDLTGLSTDL 322
           MM   RKLL PT FRPIP +V NSL    QLN  APF PKD++GL+TDL
Sbjct: 1   MMTGTRKLLSPTHFRPIPTIVHNSLADDTQLNSIAPFCPKDISGLATDL 49


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