BLASTX nr result

ID: Glycyrrhiza30_contig00024155 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00024155
         (348 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003625242.1 transcription termination factor family protein [...    69   2e-11
XP_004493712.1 PREDICTED: uncharacterized protein LOC101493291 [...    59   6e-08
XP_019421301.1 PREDICTED: transcription termination factor MTEF1...    59   8e-08
KRG95364.1 hypothetical protein GLYMA_19G146300 [Glycine max]          54   7e-06

>XP_003625242.1 transcription termination factor family protein [Medicago
           truncatula] AES81460.1 transcription termination factor
           family protein [Medicago truncatula]
          Length = 571

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 42/74 (56%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = +3

Query: 135 MIDFRKLRSTFTFLNAAQNHHHPRLNKPPQQNPRFYST-KRTLQSDTKPP--PKSVMKEA 305
           MID RKLR TFTF N          N  P  NPRFY+T K+ +Q ++KP    K  +KEA
Sbjct: 1   MIDLRKLRLTFTFFNLT--------NLKPSLNPRFYNTAKKPIQLNSKPKILSKLTIKEA 52

Query: 306 QAALLEYLHSTRSL 347
           QAALLEYLHSTRSL
Sbjct: 53  QAALLEYLHSTRSL 66


>XP_004493712.1 PREDICTED: uncharacterized protein LOC101493291 [Cicer arietinum]
          Length = 560

 Score = 59.3 bits (142), Expect = 6e-08
 Identities = 38/72 (52%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = +3

Query: 135 MIDFRKLR-STFTFLNAAQNHHHPRLNKPPQQNPRFYSTKRTLQSDTKPPPKSVMKEAQA 311
           MI FRK R +TFTF +         +N  P  NPRF++TK  L      P KS +KEAQ+
Sbjct: 1   MIGFRKPRLTTFTFFD---------VNLKPSLNPRFHTTKPKL------PSKSTIKEAQS 45

Query: 312 ALLEYLHSTRSL 347
           ALLEYLHSTRSL
Sbjct: 46  ALLEYLHSTRSL 57


>XP_019421301.1 PREDICTED: transcription termination factor MTEF18,
           mitochondrial-like [Lupinus angustifolius] OIW17401.1
           hypothetical protein TanjilG_22513 [Lupinus
           angustifolius]
          Length = 561

 Score = 58.9 bits (141), Expect = 8e-08
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
 Frame = +3

Query: 135 MIDFRKLRSTFTFLNAAQNHHHPRLNKPPQQNPRFYSTKRT---LQSDTKPPPKSVMKEA 305
           M  FRKLR TFTF      +  P+ +  P QNPRF  T +    LQ + K  P ++ +EA
Sbjct: 1   MFHFRKLRLTFTF---PIFNFSPKTHLKPSQNPRFLQTTKKSPILQPEKKFTPTTI-REA 56

Query: 306 QAALLEYLHSTRSL 347
           Q+ALLEYLHSTRSL
Sbjct: 57  QSALLEYLHSTRSL 70


>KRG95364.1 hypothetical protein GLYMA_19G146300 [Glycine max]
          Length = 576

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +3

Query: 219 PQQNPRFYSTKRTL-QSDTKPPPKSVMKEAQAALLEYLHSTRSL 347
           P QNPRF STK+   +S TK   K+ +KEAQAALLEYLHSTRSL
Sbjct: 16  PWQNPRFLSTKKKPPKSGTKFIGKAALKEAQAALLEYLHSTRSL 59


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