BLASTX nr result

ID: Glycyrrhiza30_contig00019969 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00019969
         (205 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP69874.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    62   9e-10
KYP38810.1 Transposon TX1 uncharacterized [Cajanus cajan]              60   8e-09
KYP55831.1 Retrovirus-related Pol polyprotein LINE-1, partial [C...    57   2e-08
KYP53454.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    57   5e-08
KYP45495.1 Retrovirus-related Pol polyprotein LINE-1, partial [C...    57   5e-08
KYP36982.1 Retrovirus-related Pol polyprotein LINE-1, partial [C...    56   1e-07
KYP56473.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    56   1e-07
KYP65496.1 Transposon TX1 uncharacterized [Cajanus cajan]              55   2e-07
KYP76194.1 Retrovirus-related Pol polyprotein LINE-1, partial [C...    55   5e-07
KYP43972.1 hypothetical protein KK1_034556 [Cajanus cajan]             52   5e-07
KYP46503.1 LINE-1 reverse transcriptase isogeny, partial [Cajanu...    53   2e-06
KYP33787.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]        53   2e-06
KYP67366.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    53   2e-06
KYP61054.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    52   3e-06
KYP71396.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...    52   3e-06
KYP42324.1 Putative ribonuclease H protein At1g65750 family [Caj...    52   3e-06
GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran...    51   8e-06
KYP54362.1 hypothetical protein KK1_000549, partial [Cajanus cajan]    48   9e-06
KYP34116.1 hypothetical protein KK1_044965, partial [Cajanus cajan]    48   9e-06

>KYP69874.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 956

 Score = 62.4 bits (150), Expect = 9e-10
 Identities = 29/68 (42%), Positives = 42/68 (61%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           R+N    L +E G+W+ +P  LE MVT+FY +LF D+    P  L  AFP L++D+L  L
Sbjct: 452 RRNKVFKLLNENGDWMEQPAELERMVTTFYRTLFTDERHMEPFSLTNAFPRLNEDELSTL 511

Query: 24  ELEVTQGE 1
           E  ++ GE
Sbjct: 512 ETPISNGE 519


>KYP38810.1 Transposon TX1 uncharacterized [Cajanus cajan]
          Length = 738

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 30/68 (44%), Positives = 39/68 (57%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           RKN    +Q+E G WI +  +LEA+ T FYS+LF D     P CL  +FP L Q D   L
Sbjct: 372 RKNKVVKIQNELGEWIEDKAKLEALTTRFYSNLFTDSGRYEPYCLTNSFPELPQHDKDKL 431

Query: 24  ELEVTQGE 1
            + +TQ E
Sbjct: 432 AIPLTQQE 439


>KYP55831.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
          Length = 182

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 28/68 (41%), Positives = 41/68 (60%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           R N    L +E+ +W+ +P  LE MVT+FY SLF D+    P  L  AFP L++D+L  L
Sbjct: 21  RSNKVVKLMNEDRDWMEKPAELERMVTTFYKSLFTDEGNLEPFYLTNAFPRLNKDELSTL 80

Query: 24  ELEVTQGE 1
           E+ ++  E
Sbjct: 81  EVPISNEE 88


>KYP53454.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 315

 Score = 57.4 bits (137), Expect = 5e-08
 Identities = 29/57 (50%), Positives = 34/57 (59%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDL 34
           RKN    LQ+EEG WI   Q LE +VT FY +LF D     P CL  AFPSL+  +L
Sbjct: 81  RKNKIVKLQNEEGVWIENKQELEHLVTDFYKNLFHDSGKYIPYCLTSAFPSLTAQEL 137


>KYP45495.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
          Length = 351

 Score = 57.4 bits (137), Expect = 5e-08
 Identities = 28/68 (41%), Positives = 40/68 (58%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           R+N    L +E G+W+ +P  LE MVT+FY  LF D+    P  L  AF  L++D+L  L
Sbjct: 27  RRNKVFKLLNENGDWMEQPAELERMVTTFYIMLFTDEGHMEPFSLTNAFSRLNEDELSTL 86

Query: 24  ELEVTQGE 1
           E  ++ GE
Sbjct: 87  EAPISNGE 94


>KYP36982.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
          Length = 360

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 27/68 (39%), Positives = 35/68 (51%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           RK     L ++  +WI     LE+MVT FY +LF D E   P CL  AFP L  DDL ++
Sbjct: 203 RKRRIMKLMNDNDDWITHKDELESMVTKFYKNLFNDTEDDEPFCLSNAFPRLDDDDLSLI 262

Query: 24  ELEVTQGE 1
              +   E
Sbjct: 263 GAPIKNDE 270


>KYP56473.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 519

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           R+N    L +E G+W+ +  +LE MVT+FY ++F D+    P  L   FP L++D+L  L
Sbjct: 230 RRNKVFKLLNENGDWMEQLAKLERMVTTFYRTIFTDEGHMEPFSLTNVFPRLNEDELSTL 289

Query: 24  ELEVTQGE 1
           E  ++ GE
Sbjct: 290 ETPISNGE 297


>KYP65496.1 Transposon TX1 uncharacterized [Cajanus cajan]
          Length = 563

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 26/68 (38%), Positives = 40/68 (58%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           R++  + L +++G W+  P  LE MVTSFY+SLF ++      CL  AFP LS+ +L  L
Sbjct: 361 RRSKVDKLMNDDGEWVEHPAELERMVTSFYTSLFTNEGISTAFCLTNAFPRLSEAELSTL 420

Query: 24  ELEVTQGE 1
              ++  E
Sbjct: 421 GAPISNEE 428


>KYP76194.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
          Length = 553

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 27/68 (39%), Positives = 38/68 (55%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           RKN    +Q++ G+WI     LE M T+FY SLF +     P CL  +FP +SQ+D  ML
Sbjct: 41  RKNRIMRIQNDPGDWIENQSDLENMATTFYRSLFTEHGDYEPFCLSNSFPEISQEDKNML 100

Query: 24  ELEVTQGE 1
              ++  E
Sbjct: 101 AAPLSHQE 108


>KYP43972.1 hypothetical protein KK1_034556 [Cajanus cajan]
          Length = 104

 Score = 52.0 bits (123), Expect = 5e-07
 Identities = 22/68 (32%), Positives = 38/68 (55%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           R+N  E L ++   W+ +   L+ MVT+FY +LF         CL  AFP L +++L ++
Sbjct: 18  RRNKVEKLMNDNNKWVTQQGELKKMVTNFYKTLFSYTRTSTTVCLTNAFPQLDEEELAVI 77

Query: 24  ELEVTQGE 1
           E +++  E
Sbjct: 78  ESQISNEE 85


>KYP46503.1 LINE-1 reverse transcriptase isogeny, partial [Cajanus cajan]
          Length = 363

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 22/68 (32%), Positives = 39/68 (57%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           RK  +  L ++   W+ +  +LE+MVT++Y SLF D     P CL  +FP L+ ++L ++
Sbjct: 176 RKGIFVKLMNDNDEWVTQKDKLESMVTTYYKSLFTDTGRTNPFCLSNSFPHLNDNELSLI 235

Query: 24  ELEVTQGE 1
            + +   E
Sbjct: 236 GVSIRNDE 243


>KYP33787.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]
          Length = 309

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           RKN+   +Q++ G+WI     LE M T+FY SLF +     P CL  + P +SQ+D  ML
Sbjct: 5   RKNTIMRIQNDSGDWIENQSDLENMETTFYRSLFTEHGDYEPFCLSNSLPEISQEDKNML 64

Query: 24  ELEVTQGE 1
              ++  E
Sbjct: 65  AAPLSHQE 72


>KYP67366.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 463

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 28/62 (45%), Positives = 35/62 (56%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           R+N    LQD+EG  I   + LE MVT+FY  LF+D E   P CL   FP+LS  +L   
Sbjct: 305 RQNRIVKLQDDEGTSIENKRDLELMVTAFYKRLFKDPEVYVPYCLTSTFPALSAQELEAF 364

Query: 24  EL 19
            L
Sbjct: 365 SL 366


>KYP61054.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 636

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPT--CLFGAFPSLSQDDLG 31
           R+N  E L ++   WI +P+ +E++VTSFY  LF D  P G T  CL  AFPSL  + L 
Sbjct: 18  RRNRIEKLLNDNNEWINQPEEMESLVTSFYKDLFCD--PGGATRFCLSNAFPSLGMEMLS 75

Query: 30  MLELEVTQGE 1
            +   +   E
Sbjct: 76  EIGKPINNDE 85


>KYP71396.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 733

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           ++N  ++LQDE G WI +   LE +VT+FY  LF++ +P  P  L G FP +    +  L
Sbjct: 432 QRNKVKMLQDESGRWISDKAELEGLVTNFYKDLFQNIDPYTPFNLTGYFPEVHDSLMQNL 491

Query: 24  ELEVTQGE 1
             ++ + E
Sbjct: 492 GRDIIEDE 499


>KYP42324.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1443

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 27/68 (39%), Positives = 37/68 (54%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           RKN    LQDE G WI +  +LE +V  FY  LF +     P CL  +FP L+  D+ +L
Sbjct: 447 RKNRIIKLQDEVGVWIEDKAKLENLVNRFYMELFTNSGGHEPFCLSKSFPELTSGDMQIL 506

Query: 24  ELEVTQGE 1
           E  ++  E
Sbjct: 507 EAPLSDHE 514


>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
          Length = 1250

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGML 25
           R N  E +Q+ EG W+ +   +E + T FY  LF +++   P  L GAFP++ +  L  L
Sbjct: 250 RHNKVETIQNAEGVWVTDQHEMEMVATDFYKCLFTNNDLFTPFFLAGAFPNIDEHKLNFL 309

Query: 24  ELEVTQGE 1
           +  VT  E
Sbjct: 310 DQPVTNRE 317


>KYP54362.1 hypothetical protein KK1_000549, partial [Cajanus cajan]
          Length = 58

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQ 43
           RKN   +LQ+++G W+ + +  E MVT+FY+ LF   + R   CL   FP L +
Sbjct: 2   RKNKVGLLQNDQGEWVSKSEEQEKMVTNFYNDLFHKLDIRDAFCLSQCFPILDE 55


>KYP34116.1 hypothetical protein KK1_044965, partial [Cajanus cajan]
          Length = 58

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = -2

Query: 204 RKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQ 43
           RKN   +LQ+++G W+ + +  E MVT+FY+ LF   + R   CL   FP L +
Sbjct: 2   RKNKVGLLQNDQGEWVSKSEEQEKMVTNFYNDLFHKLDIRDAFCLSQCFPILDE 55


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