BLASTX nr result
ID: Glycyrrhiza30_contig00018139
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza30_contig00018139
(716 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum] 103 6e-22
GAU10517.1 hypothetical protein TSUD_421950, partial [Trifolium ... 89 6e-18
GAU26533.1 hypothetical protein TSUD_361660 [Trifolium subterran... 84 3e-16
GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum] 87 6e-16
GAU37823.1 hypothetical protein TSUD_63850 [Trifolium subterraneum] 82 9e-16
P0C2F6.1 RecName: Full=Putative ribonuclease H protein At1g65750 79 3e-13
AAF23831.1 F1E22.12 [Arabidopsis thaliana] 79 3e-13
XP_018435759.1 PREDICTED: uncharacterized protein LOC108808055 [... 71 1e-10
AAD22368.1 putative non-LTR retroelement reverse transcriptase [... 67 2e-09
GAU31849.1 hypothetical protein TSUD_114600 [Trifolium subterran... 64 4e-09
BAB09815.1 non-LTR retroelement reverse transcriptase-like [Arab... 66 6e-09
ABE65462.1 hypothetical protein At2g27870 [Arabidopsis thaliana] 65 6e-09
XP_019158195.1 PREDICTED: uncharacterized protein LOC109154910 [... 66 7e-09
XP_018474025.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 66 7e-09
AAD21515.1 putative reverse transcriptase [Arabidopsis thaliana]... 65 9e-09
ABK28199.1 unknown, partial [Arabidopsis thaliana] 65 9e-09
OMO54228.1 reverse transcriptase [Corchorus capsularis] 64 3e-08
XP_019089219.1 PREDICTED: uncharacterized protein LOC104733943 [... 60 5e-08
KFK31801.1 hypothetical protein AALP_AA6G160600 [Arabis alpina] 62 9e-08
KYP67585.1 Putative ribonuclease H protein At1g65750 family [Caj... 62 1e-07
>GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum]
Length = 533
Score = 103 bits (258), Expect = 6e-22
Identities = 66/162 (40%), Positives = 90/162 (55%), Gaps = 12/162 (7%)
Frame = +1
Query: 262 IEVTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNLGSVGIIPGA 426
+ V+W PPP VN +DG + +S ACGG++R + GF +GS I A
Sbjct: 361 VAVSWKPPPDEWHKVN-VDGSF-NTISGSTACGGLIRNQHGIFVKGFYSKIGSSNAI-WA 417
Query: 427 SKWR-----RILE--LVRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEICHMLHDPGWC 585
W RI + L+ V+FEMDSKV+VN V NA+L PL+ E+ +L P W
Sbjct: 418 EMWVLRIGIRIAQNLLLPKVVFEMDSKVIVNMVTSGHTNNAYLSPLLGEVVSLLQHPNWE 477
Query: 586 TRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
T + HVYREANR AD+L + GHSS F +I+++ L IL
Sbjct: 478 TSIAHVYREANRCADFLTNKGHSSSFEGDIVNLACHSLQAIL 519
>GAU10517.1 hypothetical protein TSUD_421950, partial [Trifolium subterraneum]
Length = 238
Score = 89.4 bits (220), Expect = 6e-18
Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 15/224 (6%)
Frame = +1
Query: 85 WSLLFAVVTWCLCGSIE-MILSSTTSFGNQRNKLKSLSCCTIAKELLHPV-SVFIDCSHR 258
W F V W L ++ S T GN I KE+ P+ S + S R
Sbjct: 9 WPTFFGVSVWALWKDRNNLVFSRETELGNHLTSKVVNMAYQIEKEIKCPLASRDENISKR 68
Query: 259 WIEVTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNLGS------ 405
+ W PP G V +N DG S+ + +ACGG++R + GF NLG+
Sbjct: 69 --NIHWRRPPVGFVTINT-DG---SYKNGYSACGGLIRDHRGHFVKGFLRNLGTGNALLA 122
Query: 406 --VGIIPGASKWRRILELVRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEICHMLHDPG 579
GI+ G R + + VI E DS VVN ++ R +LQPL+ E+ ++H P
Sbjct: 123 ELCGILFGCQMARDMC--LTHVILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPS 180
Query: 580 WCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
W V+H++REAN A+ LA GH F +L +P+ + +L
Sbjct: 181 WTIHVNHIHREANSCANALAFKGHDVGFTHVLLDSIPAYISTLL 224
>GAU26533.1 hypothetical protein TSUD_361660 [Trifolium subterraneum]
Length = 193
Score = 83.6 bits (205), Expect = 3e-16
Identities = 56/161 (34%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Frame = +1
Query: 268 VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNLGS--------V 408
+ W PP G V +N DG S+ + +ACGG++R + GF NLG+
Sbjct: 25 IHWRRPPVGFVTINT-DG---SYKNGYSACGGLIRYHCGHFVKGFLRNLGTGNALLAELC 80
Query: 409 GIIPGASKWRRILELVRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEICHMLHDPGWCT 588
GI+ G R + + VI E DS VVN ++ R +LQPL+ E+ ++H PGW
Sbjct: 81 GILFGCQMARDMR--LTHVILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPGWTI 138
Query: 589 RVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
V+H++REAN D LA GH F +L +P+ + +L
Sbjct: 139 HVNHIHREANSCFDALAFKGHDVGFTHVMLDSIPAYISTLL 179
>GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum]
Length = 482
Score = 86.7 bits (213), Expect = 6e-16
Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
Frame = +1
Query: 262 IEVTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNLGSVGIIPGA 426
+ V+W PP G VN +DG + +S ACGG++R + GF +GS A
Sbjct: 340 VAVSWKPPLDGWHKVN-VDGSF-NTISGSTACGGLLRNQHGIFVKGFYSKIGSSNA-NWA 396
Query: 427 SKWR-----RILE--LVRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEICHMLHDPGWC 585
W RI + L+ V+FEMDSKV+VN V NA+L PL+ EI +L P W
Sbjct: 397 EMWALRIGIRIAQNLLLPKVVFEMDSKVIVNMVTSGHTNNAYLSPLLGEIVSLLQHPNWE 456
Query: 586 TRVDHVYREANRAADWLAS 642
T + HVYREAN+ AD+L +
Sbjct: 457 TSIAHVYREANQCADFLTN 475
>GAU37823.1 hypothetical protein TSUD_63850 [Trifolium subterraneum]
Length = 193
Score = 82.4 bits (202), Expect = 9e-16
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Frame = +1
Query: 268 VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNLGS--------V 408
+ W PP G V +N DG S+ + +ACGG++R + GF NLG+
Sbjct: 25 IHWRRPPVGFVTINT-DG---SYKNGYSACGGLIRDHRGHFVKGFLRNLGTGNALLAELC 80
Query: 409 GIIPGASKWRRILELVRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEICHMLHDPGWCT 588
GI+ G R + + VI E DS VVN ++ R +LQPL+ E+ ++H P W
Sbjct: 81 GILFGCQMARDMR--LTHVILETDSTHVVNMINNRFTSIFYLQPLLHEVISLIHLPSWTI 138
Query: 589 RVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
V+H++REAN D LA GH F +L +P+ + +L
Sbjct: 139 HVNHIHREANSCVDALAFKGHDVGFTHVLLDSIPAYISTLL 179
>P0C2F6.1 RecName: Full=Putative ribonuclease H protein At1g65750
Length = 620
Score = 79.0 bits (193), Expect = 3e-13
Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 21/234 (8%)
Frame = +1
Query: 73 EFIPWSLLFAVVTWC----LCGSIEMILSSTTSFGNQ---RNKLKSLSCCTIAKELLHPV 231
E IPWS +FAV+ W CG+I FG R+++K + + H
Sbjct: 385 EDIPWSTIFAVIIWWGWKWRCGNI---------FGENTKCRDRVKFVKEWAVEVYRAHSG 435
Query: 232 SVFIDCSHRWIE--VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVRLITG-----FS 390
+V + + +E + WV P G V VN DG + +A GGV+R TG FS
Sbjct: 436 NVLVGITQPRVERMIGWVSPCVGWVKVNT-DGASRGNPGLASA-GGVLRDCTGAWCGGFS 493
Query: 391 CNLGSVGIIPGASKWRRILEL-------VRSVIFEMDSKVVVNFVHCRVAGNAFLQPLIS 549
N+G P A W L V V E+DS+V+V F+ ++ + L L+
Sbjct: 494 LNIGRCSA-PQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLV- 551
Query: 550 EICHMLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
+CH W R+ HVYREANR AD LA+ S + +VP + +L
Sbjct: 552 RLCHGFLQKDWLVRIVHVYREANRLADGLANYAFSLSLGFHSFDLVPDAMSSLL 605
>AAF23831.1 F1E22.12 [Arabidopsis thaliana]
Length = 1055
Score = 79.0 bits (193), Expect = 3e-13
Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 21/234 (8%)
Frame = +1
Query: 73 EFIPWSLLFAVVTWC----LCGSIEMILSSTTSFGNQ---RNKLKSLSCCTIAKELLHPV 231
E IPWS +FAV+ W CG+I FG R+++K + + H
Sbjct: 494 EDIPWSTIFAVIIWWGWKWRCGNI---------FGENTKCRDRVKFVKEWAVEVYRAHSG 544
Query: 232 SVFIDCSHRWIE--VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVRLITG-----FS 390
+V + + +E + WV P G V VN DG + +A GGV+R TG FS
Sbjct: 545 NVLVGITQPRVERMIGWVSPCVGWVKVNT-DGASRGNPGLASA-GGVLRDCTGAWCGGFS 602
Query: 391 CNLGSVGIIPGASKWRRILEL-------VRSVIFEMDSKVVVNFVHCRVAGNAFLQPLIS 549
N+G P A W L V V E+DS+V+V F+ ++ + L L+
Sbjct: 603 LNIGRCSA-PQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLV- 660
Query: 550 EICHMLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
+CH W R+ HVYREANR AD LA+ S + +VP + +L
Sbjct: 661 RLCHGFLQKDWLVRIVHVYREANRLADGLANYAFSLSLGFHSFDLVPDAMSSLL 714
>XP_018435759.1 PREDICTED: uncharacterized protein LOC108808055 [Raphanus sativus]
Length = 1802
Score = 71.2 bits (173), Expect = 1e-10
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Frame = +1
Query: 79 IPWSLLFAVVTWC----LCGSIEMILSSTTSFGNQR---NKLKSLSCCTIAKELL---HP 228
+PW+ +FA+ W CG++ FG R +++K L +AKE++
Sbjct: 1569 VPWATMFALAIWWGWKWRCGNV---------FGENRLWRDRVKFLR--NLAKEVMIAKET 1617
Query: 229 VSVFIDCSHRW-IEVTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFS 390
+ ++ S R I + W PP G + +N DG + +A GGV+R GF+
Sbjct: 1618 ETASLETSGRVEIMIKWEPPRVGWMKLNT-DGASHGNSGLASA-GGVLRNGDGEWCGGFA 1675
Query: 391 CNLGSVGIIPGASKWRRILEL-------VRSVIFEMDSKVVVNFVHCRVAGNAFLQPLIS 549
N+G P A W L + + E+DSK+VV F+ + G+ +
Sbjct: 1676 LNIGRCSA-PLAELWGVYYGLAIAWEKGISRLEVEVDSKMVVEFLTTGI-GDTHPPSFLV 1733
Query: 550 EICHMLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVP 690
+CH W R HVYREANR AD LA+L S PF + L V P
Sbjct: 1734 RLCHGFSTRDWLVRFVHVYREANRLADGLANLAFSLPFGFHKLDVAP 1780
>AAD22368.1 putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 321
Score = 67.0 bits (162), Expect = 2e-09
Identities = 57/160 (35%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Frame = +1
Query: 268 VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNLGSVGIIPGASK 432
V+WV P G V +N DG A GGV+R I GF+ N+G V P A
Sbjct: 151 VSWVSPEDGWVKLNT-DGASRGNPGFATA-GGVLRDHNGAWIGGFAVNIG-VCSAPLAEL 207
Query: 433 WRRILEL-------VRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEICHMLHDPGWCTR 591
W L R V E+DSK+VV F+ +A + L L+ +C+ GW R
Sbjct: 208 WGVYYGLFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPLSFLL-RLCYDFLSKGWIVR 266
Query: 592 VDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
+ HVYREANR AD LA+ S ++L P + IL
Sbjct: 267 ISHVYREANRLADGLANYAFSLSLGLHLLESRPDVVSSIL 306
>GAU31849.1 hypothetical protein TSUD_114600 [Trifolium subterraneum]
Length = 171
Score = 63.9 bits (154), Expect = 4e-09
Identities = 60/166 (36%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Frame = +1
Query: 268 VTWVPPPSGTVNVNNIDGFL*SFVSIC-AACGGVVR-----LITGFSCNLGSVGIIPG-A 426
VTW+PP GT+ VN +DG SF + + GG++R + GFS G +GI
Sbjct: 4 VTWIPPLDGTIKVN-VDGS--SFNNPGRSGFGGILRDSKGNWLLGFS---GFIGISTSLC 57
Query: 427 SKWRRIL--------ELVRSVIFEMDSKVVVNFVHCRVAGNAFLQP---LISEICHMLHD 573
++ IL E R++I E DS + VNF C G + P LI +I H LH
Sbjct: 58 AELHAILNGLKIAQAERFRNIIIESDSTLAVNFA-CH--GTSQFHPYATLIQQIRH-LHQ 113
Query: 574 PGWCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
W H RE N ADWLA G SS I + P L L+L
Sbjct: 114 GDWNVSFQHTLREGNECADWLAKTGASSNDTLKIWNSCPPQLSLVL 159
>BAB09815.1 non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 66.2 bits (160), Expect = 6e-09
Identities = 68/230 (29%), Positives = 94/230 (40%), Gaps = 21/230 (9%)
Frame = +1
Query: 85 WSLLFAVVTWC----LCGSIEMILSSTTSFGNQ---RNKLKSLSCCTIAKELLHPVSVFI 243
W LFA+ W CG + FG R+++K L E H +
Sbjct: 445 WPTLFALTVWWGWKWRCGYV---------FGEDSRCRDRVKFLKSAVAEVEAAHLAANGD 495
Query: 244 DCSHRWIE--VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNLG 402
+E + W P G V +N DG A GGV+R + GF+ N+G
Sbjct: 496 AREDVLVERMIAWRKPAEGWVTMNT-DGASHGNPGQATA-GGVIRDEHGSWLVGFALNIG 553
Query: 403 SVGIIPGASKWRRILELV-------RSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEICH 561
V P A W LV R V E+DS +VV F+ + G++ + +CH
Sbjct: 554 -VCSAPLAELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQSGI-GDSHPLAFLVRLCH 611
Query: 562 MLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
W R+ HVYREANR AD LA+ + PF +L P + IL
Sbjct: 612 GFISKDWIVRITHVYREANRLADGLANYAFTLPFGFLLLDSCPEHVSSIL 661
>ABE65462.1 hypothetical protein At2g27870 [Arabidopsis thaliana]
Length = 314
Score = 65.5 bits (158), Expect = 6e-09
Identities = 71/231 (30%), Positives = 100/231 (43%), Gaps = 22/231 (9%)
Frame = +1
Query: 85 WSLLFAVVTWCL----CGSIEMILSSTTSFGNQ---RNKLKSLSCCTIAKELLHPVSVFI 243
WS LFA+ W CG+I FG Q R++++ L + H + +
Sbjct: 82 WSTLFALSIWWAWKWRCGNI---------FGVQDKCRDRVRFLKDLARETSMAHVIVRTL 132
Query: 244 DCSH-RWIE--VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNL 399
H +E + W P G +N DG + +A GGV+R GF+ N+
Sbjct: 133 SGGHGERVERLIAWSKPEEGWWKLNT-DGASRGNPGLASA-GGVLRDEEGAWRGGFALNI 190
Query: 400 GSVGIIPGASKWRRILEL-------VRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEIC 558
G V P A W L V + E+DS++VV F+ + L L+ +C
Sbjct: 191 G-VCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIXINEVHPLSFLV-RLC 248
Query: 559 HMLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
H W R+ HVYREANR AD LA+ S P + LS+VP L IL
Sbjct: 249 HDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSLVPDSLRFIL 299
>XP_019158195.1 PREDICTED: uncharacterized protein LOC109154910 [Ipomoea nil]
Length = 1367
Score = 66.2 bits (160), Expect = 7e-09
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 13/223 (5%)
Frame = +1
Query: 82 PWSLLFAVVTWCLCGSIEMILSSTTSFGNQRNKLKSLSCCTIAKELLHPVSVFIDCSHR- 258
PW++ F + W + + ++ + + + R +LS +AKE + + H
Sbjct: 1139 PWNVTFVYILWLIWKARNNLIFNNKAESHVRILNTALS---MAKEATEYIVKHVGVMHGY 1195
Query: 259 WIEVTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVV-----RLITGFSCNLGSVGIIPG 423
W V W PP G + +N DG + S I A+ GGV+ R + GFS +G+
Sbjct: 1196 WKWVRWEPPQPGWLKLNT-DGAMKSSTGI-ASAGGVIRDEHGRWVKGFSTKVGATDSF-S 1252
Query: 424 ASKW--RRILEL-----VRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEICHMLHDPGW 582
A W R L L + + EMDS VV ++ + LI + C L +
Sbjct: 1253 AELWGLREGLRLCLSEGIEKIWVEMDSATVVAIMNNGTCKGETVVALIKD-CFDLINKFN 1311
Query: 583 CTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
R+ H+ RE N+ ADWLA+ G + + + + PS L +
Sbjct: 1312 TVRISHIMREGNQCADWLANFGQNIDWGTRVWNSSPSDLNAFM 1354
>XP_018474025.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108845292
[Raphanus sativus]
Length = 1593
Score = 66.2 bits (160), Expect = 7e-09
Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 23/236 (9%)
Frame = +1
Query: 73 EFIPWSLLFAVVTWC----LCGSIEMILSSTTSFGNQR---NKLKSLSCCTIAKELLHPV 231
E IPW+ +FAV W CG++ FG R ++++ L +AKE++
Sbjct: 1358 EAIPWATMFAVSVWWGWKWRCGNV---------FGENRLWRDRVQFL--INLAKEVMLVK 1406
Query: 232 SV----FIDCSHRWIEVTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITG 384
V + + + W+PP G + +N DG +A GGV+R G
Sbjct: 1407 EVEKGHIVIGQRIEVMIGWIPPRVGWMKLNT-DGASHGNPGQASA-GGVIRNGDGEWCGG 1464
Query: 385 FSCNLGSVGIIPGASKWRRIL-ELV------RSVIFEMDSKVVVNFVHCRVAGNAFLQPL 543
F+ N+G P A W +LV R + E+DSK+VV F+ + G+A
Sbjct: 1465 FTLNIGRCSA-PLAELWGVYYGQLVAWKKSFRRLELEVDSKMVVEFLTTGI-GDAHSLSF 1522
Query: 544 ISEICHMLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
+ +CH W + HVY+EANR AD LA+L S P + V P + +L
Sbjct: 1523 LVRLCHGFLIRDWLVHIVHVYKEANRLADGLANLAFSLPLGFHSFDVAPMDVVTLL 1578
>AAD21515.1 putative reverse transcriptase [Arabidopsis thaliana] AAM15081.1
putative reverse transcriptase [Arabidopsis thaliana]
Length = 314
Score = 65.1 bits (157), Expect = 9e-09
Identities = 71/231 (30%), Positives = 100/231 (43%), Gaps = 22/231 (9%)
Frame = +1
Query: 85 WSLLFAVVTWCL----CGSIEMILSSTTSFGNQ---RNKLKSLSCCTIAKELLHPVSVFI 243
WS LFA+ W CG+I FG Q R++++ L + H + +
Sbjct: 82 WSTLFALSIWWAWKWRCGNI---------FGVQDKCRDRVRFLKDLARETSMAHVIVRTL 132
Query: 244 DCSH-RWIE--VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNL 399
H +E + W P G +N DG + +A GGV+R GF+ N+
Sbjct: 133 SGGHGERVERLIAWSKPEEGWWKLNT-DGASRGNPGLASA-GGVLRDEEGAWRGGFALNI 190
Query: 400 GSVGIIPGASKWRRILEL-------VRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEIC 558
G V P A W L V + E+DS++VV F+ + L L+ +C
Sbjct: 191 G-VCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLV-RLC 248
Query: 559 HMLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
H W R+ HVYREANR AD LA+ S P + LS+VP L IL
Sbjct: 249 HDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSLVPDSLRFIL 299
>ABK28199.1 unknown, partial [Arabidopsis thaliana]
Length = 315
Score = 65.1 bits (157), Expect = 9e-09
Identities = 71/231 (30%), Positives = 100/231 (43%), Gaps = 22/231 (9%)
Frame = +1
Query: 85 WSLLFAVVTWCL----CGSIEMILSSTTSFGNQ---RNKLKSLSCCTIAKELLHPVSVFI 243
WS LFA+ W CG+I FG Q R++++ L + H + +
Sbjct: 82 WSTLFALSIWWAWKWRCGNI---------FGVQDKCRDRVRFLKDLARETSMAHVIVRTL 132
Query: 244 DCSH-RWIE--VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNL 399
H +E + W P G +N DG + +A GGV+R GF+ N+
Sbjct: 133 SGGHGERVERLIAWSKPEEGWWKLNT-DGASRGNPGLASA-GGVLRDEEGAWRGGFALNI 190
Query: 400 GSVGIIPGASKWRRILEL-------VRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEIC 558
G V P A W L V + E+DS++VV F+ + L L+ +C
Sbjct: 191 G-VCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLV-RLC 248
Query: 559 HMLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLIL 711
H W R+ HVYREANR AD LA+ S P + LS+VP L IL
Sbjct: 249 HDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSLVPDSLRFIL 299
>OMO54228.1 reverse transcriptase [Corchorus capsularis]
Length = 790
Score = 64.3 bits (155), Expect = 3e-08
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Frame = +1
Query: 268 VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNLGSVGIIPGASK 432
+TW PPP+GT + N DG F A+ GG++R + GF N G G + A
Sbjct: 623 ITWQPPPNGTC-ILNTDGSR-CFDDGHASAGGLIRNSEGRWMFGFLLNTGRTGSLE-AEL 679
Query: 433 W--RRILELVRS-----VIFEMDSKVVVNFVHCRVAGNAFLQPLISEICHMLHDPGWCTR 591
W R+ + + ++ +I E D++VVV F+ V + LI + C L + W
Sbjct: 680 WGIRQGIIMAKNRGIQRLIIEFDAQVVVQFLRSTVLASHPCYTLIRD-CLELINSDWIVD 738
Query: 592 VDHVYREANRAADWLASLGHSSPFHCNILSVVP 690
+ H+ RE NR AD LA L HS+P ++L P
Sbjct: 739 IRHICREGNRCADHLADLAHSAPNGVSLLEDPP 771
>XP_019089219.1 PREDICTED: uncharacterized protein LOC104733943 [Camelina sativa]
Length = 147
Score = 60.5 bits (145), Expect = 5e-08
Identities = 48/134 (35%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Frame = +1
Query: 349 AACGGVVR-----LITGFSCNLGSVGIIPGASKWRRILELVRS-------VIFEMDSKVV 492
A GGV+ I GF+ +G + P A W LV + + E+DSKVV
Sbjct: 2 ATAGGVLHDSSGAWIGGFALQIG-ICSAPLAELWGVYYGLVMAWEKQATRLELEIDSKVV 60
Query: 493 VNFVHCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCN 672
V F+ V+ L LI +CH WC R+ HVYRE NR AD LA+ S +
Sbjct: 61 VGFLKTGVSEAHLLSFLIC-LCHGFISRDWCVRISHVYRETNRLADGLANYAFSLELVFH 119
Query: 673 ILSVVPSPLGLILS 714
L VV S + +LS
Sbjct: 120 ALDVVSSCIEFLLS 133
>KFK31801.1 hypothetical protein AALP_AA6G160600 [Arabis alpina]
Length = 373
Score = 62.4 bits (150), Expect = 9e-08
Identities = 55/165 (33%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Frame = +1
Query: 268 VTWVPPPSGTVNVNNIDGFL*SFVSICAACGGVVR-----LITGFSCNLGSVGIIPGASK 432
+ W PP G V +N DG + AA GGV+R GF N+G + P A
Sbjct: 203 IKWQPPRDGWVKLNT-DGASRGNPGLAAA-GGVLRDGDGNWCGGFVLNIG-ICFAPLAEL 259
Query: 433 W-----------RRILELVRSVIFEMDSKVVVNFVHCRVAGNAFLQPLISEICHMLHDPG 579
W RRI L E+DS +VV F+ ++ L L+ +CH
Sbjct: 260 WGVYYGLYIAWERRITRLE----IEVDSAIVVEFLKTGISEYHPLSFLV-RLCHGFISRD 314
Query: 580 WCTRVDHVYREANRAADWLASLGHSSPFHCNILSVVPSPLGLILS 714
W R+ HVYREANR AD LA+ S P L +P + LI +
Sbjct: 315 WIVRIVHVYREANRLADGLANYAFSLPLGFLFLESIPDSVRLIFA 359
>KYP67585.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 363
Score = 62.0 bits (149), Expect = 1e-07
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Frame = +1
Query: 178 KLKSLSCCTIAKELLHPVSVFIDCSHRWIEVTWVPPPSGTVNVNNIDGFL*SFVSICAAC 357
K + L +KE S F+ + + W PPP G++ +N DG + V C
Sbjct: 118 KRRCLEISRASKECSTFSSKFLGDPYGSSPIRWQPPPLGSIKLN-CDGAVRG-VGRKVGC 175
Query: 358 GGVVR-----LITGFSCNLGSVGIIPGASKWR-----RILE---LVRSVIFEMDSKVVVN 498
GG++R I GFSC LG I+ A W RI++ +I E+DS + +
Sbjct: 176 GGIIRNYLGGFIMGFSCKLGQCSILQ-AELWAIFHGLRIIKEKGFKEDIIVELDSSLAIK 234
Query: 499 FVHCRVAGNAFLQPLISEICHMLHDPGWCTRVDHVYREANRAADWLASLGHSSPFHCNIL 678
F++ + + PLI+ I L D H+YREAN+ D +A+L I
Sbjct: 235 FLNEGCSASHSCAPLINSIVE-LADMEQDLNCSHIYREANQVNDAMANLSFDIQDKFQIF 293
Query: 679 SVVPSPLGLILS 714
+ SP G++ S
Sbjct: 294 N--NSPHGVVFS 303