BLASTX nr result
ID: Glycyrrhiza30_contig00017926
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza30_contig00017926
(969 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_068729.1 putative reverse transcriptase [Soybean chlorotic mo... 270 2e-81
AEE01492.1 reverse transcriptase [Blueberry red ringspot virus] 263 5e-79
AEQ49589.1 reverse transcriptase [Blueberry red ringspot virus] 261 9e-79
AEH95573.1 reverse transcriptase [Blueberry red ringspot virus] 261 1e-78
NP_395469.1 putative reverse transcriptase [Blueberry red ringsp... 261 1e-78
AEQ38577.1 reverse transcriptase [Blueberry red ringspot virus] 261 1e-78
YP_009254008.1 putative aspartic protease [Water chestnut soymov... 253 2e-75
NP_861410.1 putative multifunctional pol protein [Cestrum yellow... 251 6e-75
BAO53386.1 reverse transcriptase [Cauliflower mosaic virus] 247 4e-73
P03555.1 RecName: Full=Enzymatic polyprotein; Includes: RecName:... 247 4e-73
BAO53393.1 reverse transcriptase [Cauliflower mosaic virus] BAO5... 246 7e-73
BAO53407.1 reverse transcriptase [Cauliflower mosaic virus] 246 8e-73
BAO53421.1 reverse transcriptase [Cauliflower mosaic virus] 246 1e-72
Q02964.1 RecName: Full=Enzymatic polyprotein; Includes: RecName:... 246 2e-72
BAO53379.1 reverse transcriptase [Cauliflower mosaic virus] BAO5... 246 2e-72
NP_056728.1 reverse transcriptase [Cauliflower mosaic virus] P03... 246 2e-72
APG80689.1 reverse transcriptase [Cauliflower mosaic virus] 245 2e-72
BAO53603.1 reverse transcriptase [Cauliflower mosaic virus] 245 3e-72
BAO53547.1 reverse transcriptase [Cauliflower mosaic virus] 245 3e-72
BAO53456.1 reverse transcriptase [Cauliflower mosaic virus] 245 3e-72
>NP_068729.1 putative reverse transcriptase [Soybean chlorotic mottle virus]
P15629.2 RecName: Full=Enzymatic polyprotein; Includes:
RecName: Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase CAC16945.1 putative reverse transcriptase
[Soybean chlorotic mottle virus]
Length = 692
Score = 270 bits (689), Expect = 2e-81
Identities = 143/306 (46%), Positives = 200/306 (65%), Gaps = 1/306 (0%)
Frame = +2
Query: 41 AYVDTGASICIATKALFDKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLFIIPII 220
AY+DTGA++C + + + WE ++ P + IAD S H + L IENK F+IPII
Sbjct: 33 AYIDTGATLCFGKRKISNNWEILKQPKEIIIADKSKHYIREAISNVFLKIENKEFLIPII 92
Query: 221 YQQQTGVDMILGNNFLRLYAPFCQYLNYMTLRTPYIRGKQIREIIRIPILHYTKCHYSEF 400
Y +G+D+I+GNNFL+LY PF Q L + LR + + ++I IL
Sbjct: 93 YLHDSGLDLIIGNNFLKLYQPFIQRLETIELRWKNLNNPKESQMISTKIL---------- 142
Query: 401 SQLKRGEIIGIVCKKMRHVLMNAEEGRIIPANIEELLDKVCSENPLDPKINNKNTELVEL 580
+ E++ + +K+ H+ + E + IEE L++VCSE+PLD + NKN L+E+
Sbjct: 143 ---TKNEVLKLSFEKI-HICL---EKYLFFKTIEEQLEEVCSEHPLD-ETKNKNGLLIEI 194
Query: 581 KLKDPIKEIKCKPMI-YTKQDRDEFAEDIKQMCEKGLVRPSKSKHSAPAFYVENHNEIKR 757
+LKDP++EI I YT +D EF E+ + + +KGL+R S+S HSAPAFYVENHNEIKR
Sbjct: 195 RLKDPLQEINVTNRIPYTIRDVQEFKEECEDLLKKGLIRESQSPHSAPAFYVENHNEIKR 254
Query: 758 GKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRLTEESKAL 937
GKRRMVINYK+MN+A GD+Y LPRKD I+E+++ WFS+ D KSG+YQ+RL E +K L
Sbjct: 255 GKRRMVINYKKMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKSGYYQLRLHENTKPL 314
Query: 938 TAFSCP 955
TAFSCP
Sbjct: 315 TAFSCP 320
>AEE01492.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 680
Score = 263 bits (671), Expect = 5e-79
Identities = 149/321 (46%), Positives = 208/321 (64%), Gaps = 3/321 (0%)
Frame = +2
Query: 2 IKIIIKNNDRETEAYVDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKK 175
IKI I + + AY+DTGAS+C+ + K W++++ P + +AD ++ +A
Sbjct: 31 IKITI--SQKTILAYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQITKVALM 88
Query: 176 TTLIIENKLFIIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTLRTPYIRGKQIREII 355
T+IIE + F++P IYQ +GV MI+GNNFLRLY PFCQYL+Y+TLR P + ++ +E+I
Sbjct: 89 ITIIIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQK-QEVI 147
Query: 356 RIPILHYTKCHYSEFSQLKRGEIIGIVCKKMRHVLMNAEEGRIIPANIEELLDKVCSENP 535
+IPI H SQL + +++ +V +LM+ + ++L + S +
Sbjct: 148 KIPIHHS--------SQLIKAKLLNLVTNLEEQLLMD---------QVNKILQERFSLDL 190
Query: 536 LDPKINNKNTELVELKLKDPIKEIKCKPMI-YTKQDRDEFAEDIKQMCEKGLVRPSKSKH 712
L K NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS H
Sbjct: 191 LGEK--NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLLNKGLIRPSKSPH 248
Query: 713 SAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCK 892
SAPAFYVENH+EIKR KRR+VINYK MN+A G LPR D I+ R++ WFST D K
Sbjct: 249 SAPAFYVENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVK 308
Query: 893 SGFYQIRLTEESKALTAFSCP 955
S ++Q+RLTEESK LTAFS P
Sbjct: 309 SAYWQLRLTEESKPLTAFSYP 329
>AEQ49589.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 657
Score = 261 bits (668), Expect = 9e-79
Identities = 149/321 (46%), Positives = 210/321 (65%), Gaps = 3/321 (0%)
Frame = +2
Query: 2 IKIIIKNNDRETEAYVDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKK 175
IKI I + + AY+DTGAS+C+ + K W++++ P + +AD ++ +A
Sbjct: 8 IKITI--SQKTILAYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQITKVALM 65
Query: 176 TTLIIENKLFIIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTLRTPYIRGKQIREII 355
T++IE + F++P IYQ +GV MI+GNNFLRLY PFCQYL+Y+TLR P + ++ +E+I
Sbjct: 66 ITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQK-QEVI 124
Query: 356 RIPILHYTKCHYSEFSQLKRGEIIGIVCKKMRHVLMNAEEGRIIPANIEELLDKVCSENP 535
+IPI H SQL + +++ +V N EE +++ + ++L + S +
Sbjct: 125 KIPIHHS--------SQLIKAKLLNLVT--------NIEE-QLLMEQVNKILQERFSLDL 167
Query: 536 LDPKINNKNTELVELKLKDPIKEIKCKPMI-YTKQDRDEFAEDIKQMCEKGLVRPSKSKH 712
L K NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS H
Sbjct: 168 LGEK--NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPH 225
Query: 713 SAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCK 892
SAPAFYVENH+EIKR KRR+VINYK MN+A G LPR D I+ R++ WFST D K
Sbjct: 226 SAPAFYVENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVK 285
Query: 893 SGFYQIRLTEESKALTAFSCP 955
S ++Q+RLTEESK LTAFS P
Sbjct: 286 SAYWQLRLTEESKPLTAFSYP 306
>AEH95573.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 667
Score = 261 bits (668), Expect = 1e-78
Identities = 149/321 (46%), Positives = 210/321 (65%), Gaps = 3/321 (0%)
Frame = +2
Query: 2 IKIIIKNNDRETEAYVDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKK 175
IKI I + + AY+DTGAS+C+ + K W++++ P + +AD ++ +A
Sbjct: 18 IKITI--SQKTILAYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQITKVALM 75
Query: 176 TTLIIENKLFIIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTLRTPYIRGKQIREII 355
T++IE + F++P IYQ +GV MI+GNNFLRLY PFCQYL+Y+TLR P + ++ +E+I
Sbjct: 76 ITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQK-QEVI 134
Query: 356 RIPILHYTKCHYSEFSQLKRGEIIGIVCKKMRHVLMNAEEGRIIPANIEELLDKVCSENP 535
+IPI H SQL + +++ +V N EE +++ + ++L + S +
Sbjct: 135 KIPIHHS--------SQLIKAKLLNLVT--------NIEE-QLLMEQVNKILQERFSLDL 177
Query: 536 LDPKINNKNTELVELKLKDPIKEIKCKPMI-YTKQDRDEFAEDIKQMCEKGLVRPSKSKH 712
L K NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS H
Sbjct: 178 LGEK--NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPH 235
Query: 713 SAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCK 892
SAPAFYVENH+EIKR KRR+VINYK MN+A G LPR D I+ R++ WFST D K
Sbjct: 236 SAPAFYVENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRSDYIMNRLKGKIWFSTLDVK 295
Query: 893 SGFYQIRLTEESKALTAFSCP 955
S ++Q+RLTEESK LTAFS P
Sbjct: 296 SAYWQLRLTEESKPLTAFSYP 316
>NP_395469.1 putative reverse transcriptase [Blueberry red ringspot virus]
AAL13274.1 putative reverse transcriptase [Blueberry red
ringspot virus]
Length = 657
Score = 261 bits (667), Expect = 1e-78
Identities = 149/321 (46%), Positives = 210/321 (65%), Gaps = 3/321 (0%)
Frame = +2
Query: 2 IKIIIKNNDRETEAYVDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKK 175
IKI I + + AY+DTGAS+C+ + K W++++ P + +AD ++ +A
Sbjct: 8 IKITI--SQKTILAYIDTGASLCLLPEYNLPKQLWKELKKPITIRVADKRELQINKVALM 65
Query: 176 TTLIIENKLFIIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTLRTPYIRGKQIREII 355
T++IE + F++P IYQ +GV MI+GNNFLRLY PFCQYL+Y+TLR P + ++ +E+I
Sbjct: 66 ITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQK-QEVI 124
Query: 356 RIPILHYTKCHYSEFSQLKRGEIIGIVCKKMRHVLMNAEEGRIIPANIEELLDKVCSENP 535
+IPI H SQL + +++ +V N EE +++ + ++L + S +
Sbjct: 125 KIPIHHS--------SQLIKAKLLNLVT--------NIEE-QLLMEQVNKILQERFSLDL 167
Query: 536 LDPKINNKNTELVELKLKDPIKEIKCKPMI-YTKQDRDEFAEDIKQMCEKGLVRPSKSKH 712
L K NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS H
Sbjct: 168 LGEK--NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPH 225
Query: 713 SAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCK 892
SAPAFYVENH+EIKR KRR+VINYK MN+A G LPR D I+ R++ WFST D K
Sbjct: 226 SAPAFYVENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRADYIMNRLKGKIWFSTLDVK 285
Query: 893 SGFYQIRLTEESKALTAFSCP 955
S ++Q+RLTEESK LTAFS P
Sbjct: 286 SAYWQLRLTEESKPLTAFSYP 306
>AEQ38577.1 reverse transcriptase [Blueberry red ringspot virus]
Length = 657
Score = 261 bits (667), Expect = 1e-78
Identities = 149/321 (46%), Positives = 210/321 (65%), Gaps = 3/321 (0%)
Frame = +2
Query: 2 IKIIIKNNDRETEAYVDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKK 175
IKI I + + AY+DTGAS+C+ + K W++++ P + +AD ++ +A
Sbjct: 8 IKITI--SQKTILAYIDTGASLCLLPEYNLPKLLWKELKKPITIRVADKRELQITKVALM 65
Query: 176 TTLIIENKLFIIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTLRTPYIRGKQIREII 355
T++IE + F++P IYQ +GV MI+GNNFLRLY PFCQYL+Y+TLR P + ++ +E+I
Sbjct: 66 ITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITLRCPKMINQK-QEVI 124
Query: 356 RIPILHYTKCHYSEFSQLKRGEIIGIVCKKMRHVLMNAEEGRIIPANIEELLDKVCSENP 535
+IPI H SQL + +++ +V N EE +++ + ++L + S +
Sbjct: 125 KIPIHHS--------SQLIKAKLLNLVT--------NIEE-QLLMEQVNKILQERFSLDL 167
Query: 536 LDPKINNKNTELVELKLKDPIKEIKCKPMI-YTKQDRDEFAEDIKQMCEKGLVRPSKSKH 712
L K NKN EL+E+KLKDP EI I YT++D +EF ED++ + KGL+RPSKS H
Sbjct: 168 LGEK--NKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPH 225
Query: 713 SAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCK 892
SAPAFYVENH+EIKR KRR+VINYK MN+A G LPR D I+ R++ WFST D K
Sbjct: 226 SAPAFYVENHSEIKRAKRRIVINYKAMNEATIGTPKTLPRADYIMNRLKGKIWFSTLDVK 285
Query: 893 SGFYQIRLTEESKALTAFSCP 955
S ++Q+RLTEESK LTAFS P
Sbjct: 286 SAYWQLRLTEESKPLTAFSYP 306
>YP_009254008.1 putative aspartic protease [Water chestnut soymovirus 1] AND65752.1
putative aspartic protease [Water chestnut soymovirus 1]
Length = 680
Score = 253 bits (647), Expect = 2e-75
Identities = 139/308 (45%), Positives = 193/308 (62%), Gaps = 3/308 (0%)
Frame = +2
Query: 41 AYVDTGASICIATKALFDK--WEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLFIIP 214
AYVDTGA+ICI L DK W ++NP +V IA+ + A ++IEN F+IP
Sbjct: 19 AYVDTGATICIIKPELLDKENWTDLKNPVQVKIANNKTIEIKNKAYNIGMLIENYQFMIP 78
Query: 215 IIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTLRTPYIRGKQIREIIRIPILHYTKCHYS 394
IY TG+ +I+GNNFL+LY PF Q + +TL+ P ++G++ + L TK + +
Sbjct: 79 SIYGFDTGLPLIIGNNFLKLYQPFIQTVETVTLKCPKLKGQKSK-------LVRTKIYNT 131
Query: 395 EFSQLKRGEIIGIVCKKMRHVLMNAEEGRIIPANIEELLDKVCSENPLDPKINNKNTELV 574
F + G I +++ EE + +D++ S+NPLDP + N N+ELV
Sbjct: 132 SFILMGGGVIKQFCFTIQEELVLRLEE------QVWNQIDEMSSDNPLDP-VKNTNSELV 184
Query: 575 ELKLKDPIKEIKCKPMI-YTKQDRDEFAEDIKQMCEKGLVRPSKSKHSAPAFYVENHNEI 751
E+KLKDP +E+ I YT+QD EF E+ M EKG++ + S HSAPAFYV NH E
Sbjct: 185 EIKLKDPKQEVNVVNRIPYTEQDVLEFVEETSMMLEKGIIEIANSPHSAPAFYVNNHAEQ 244
Query: 752 KRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGFYQIRLTEESK 931
KRGKRRMVINYK MN+A G+AY LPR+D + ER+++ WFS+ D KSG++Q+RL E +K
Sbjct: 245 KRGKRRMVINYKAMNNATVGEAYKLPRQDYLFERIKDADWFSSLDAKSGYWQLRLAENTK 304
Query: 932 ALTAFSCP 955
LTAFSCP
Sbjct: 305 PLTAFSCP 312
>NP_861410.1 putative multifunctional pol protein [Cestrum yellow leaf curling
virus] Q7TD08.1 RecName: Full=Enzymatic polyprotein;
Includes: RecName: Full=Aspartic protease; Includes:
RecName: Full=Endonuclease; Includes: RecName:
Full=Reverse transcriptase AAP78924.1 putative
multifunctional pol protein [Cestrum yellow leaf curling
virus]
Length = 643
Score = 251 bits (641), Expect = 6e-75
Identities = 143/318 (44%), Positives = 200/318 (62%), Gaps = 2/318 (0%)
Frame = +2
Query: 8 IIIKNNDRETEAYVDTGASICIATKALFDKWEKVRNPARVSIADGSVHSLSWIAKKTTLI 187
I +K ND AYVDTGA+IC+A + KW K+ P ++SIAD SV + A+ +
Sbjct: 12 ITVKINDVFINAYVDTGATICLADPKIKLKWVKMEKPIKISIADKSVQEIWHRAEMVEIW 71
Query: 188 IENKLFIIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTLRTPYIRG-KQIREIIRIP 364
I N F+ + Q+ +G+D ++GNNFLRLY PF Q LNY+ LR P + Q ++I IP
Sbjct: 72 IRNYKFVAATVCQKSSGMDFVIGNNFLRLYQPFIQGLNYIKLRAPLDKDINQPSKMIYIP 131
Query: 365 ILHYTKCHYSEFSQLKRGEIIGIVCKKMRHVLMNAEEGRIIPANIEELLDKVCSENPLDP 544
+ T +F+ L++ + I HV N++ + + L++VC ENPLD
Sbjct: 132 VT--TPSKILQFAILEKLQDILFEL----HVQENSKTP--LELKVSSTLEEVCDENPLDV 183
Query: 545 KINNKNTELVELKLKDPIKEIKCKPMI-YTKQDRDEFAEDIKQMCEKGLVRPSKSKHSAP 721
K N NTELV+++L +P KE+ I Y+ +D +EF+++ + KG++ SKS HSAP
Sbjct: 184 K--NTNTELVKIELINPEKEVNVPNNIPYSLRDINEFSQECADLVRKGIIEESKSPHSAP 241
Query: 722 AFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKSGF 901
AFYVENHNEIKR KRRMVINYK +N A G+A+ LPR D I+ +V+ WFST D KSG+
Sbjct: 242 AFYVENHNEIKRKKRRMVINYKALNKATIGNAHKLPRIDSILTKVKGSNWFSTLDAKSGY 301
Query: 902 YQIRLTEESKALTAFSCP 955
+Q+RL +SK LTAFSCP
Sbjct: 302 WQLRLHPQSKPLTAFSCP 319
>BAO53386.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 678
Score = 247 bits (631), Expect = 4e-73
Identities = 139/326 (42%), Positives = 196/326 (60%), Gaps = 18/326 (5%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS ++S + K LII ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTL---RTPYIRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + +T + ++ + +RI +
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKTYPVHIAKLTKAVRIGTEGF 158
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMNA---EEGRIIPAN----------IEELLDK 517
+ S+ ++ E + I K+ + L EGR + IEELL+K
Sbjct: 159 LDS-MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLEEKLFITQQRMQKIEELLEK 217
Query: 518 VCSENPLDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVRP 697
VCSENPLDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++P
Sbjct: 218 VCSENPLDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKP 276
Query: 698 SKSKHSAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFS 877
SKS H APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K FS
Sbjct: 277 SKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFS 336
Query: 878 TFDCKSGFYQIRLTEESKALTAFSCP 955
+FDCKSGF+Q+ L +ES+ LTAF+CP
Sbjct: 337 SFDCKSGFWQVLLDQESRPLTAFTCP 362
>P03555.1 RecName: Full=Enzymatic polyprotein; Includes: RecName: Full=Aspartic
protease; Includes: RecName: Full=Endonuclease; Includes:
RecName: Full=Reverse transcriptase
Length = 679
Score = 247 bits (631), Expect = 4e-73
Identities = 140/327 (42%), Positives = 197/327 (60%), Gaps = 19/327 (5%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS ++S + K LII ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYM--TLRTPY-IRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + T Y + ++ +R+ I +
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKSYPVHITKLTRAVRVGIEGF 158
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMNA---EEGRIIPAN-----------IEELLD 514
+ + S+ ++ E + I K+ + L EGR + IEELL+
Sbjct: 159 LES-MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLSEEKLFITQQRMQKIEELLE 217
Query: 515 KVCSENPLDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVR 694
KVCSENPLDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++
Sbjct: 218 KVCSENPLDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIK 276
Query: 695 PSKSKHSAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWF 874
PSKS H APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K F
Sbjct: 277 PSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIF 336
Query: 875 STFDCKSGFYQIRLTEESKALTAFSCP 955
S+FDCKSGF+Q+ L +ES+ LTAF+CP
Sbjct: 337 SSFDCKSGFWQVLLDQESRPLTAFTCP 363
>BAO53393.1 reverse transcriptase [Cauliflower mosaic virus] BAO53400.1 reverse
transcriptase [Cauliflower mosaic virus]
Length = 678
Score = 246 bits (629), Expect = 7e-73
Identities = 138/326 (42%), Positives = 196/326 (60%), Gaps = 18/326 (5%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS ++S + K LII ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPILVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTL---RTPYIRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + +T + ++ + +R+ +
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKTYPVHIAKLTKAVRVGTEGF 158
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMNA---EEGRIIPAN----------IEELLDK 517
+ S+ ++ E + I K+ + L EGR + IEELL+K
Sbjct: 159 LDS-MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLEEKLFITQQRMQKIEELLEK 217
Query: 518 VCSENPLDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVRP 697
VCSENPLDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++P
Sbjct: 218 VCSENPLDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKP 276
Query: 698 SKSKHSAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFS 877
SKS H APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K FS
Sbjct: 277 SKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFS 336
Query: 878 TFDCKSGFYQIRLTEESKALTAFSCP 955
+FDCKSGF+Q+ L +ES+ LTAF+CP
Sbjct: 337 SFDCKSGFWQVLLDQESRPLTAFTCP 362
>BAO53407.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 246 bits (629), Expect = 8e-73
Identities = 140/327 (42%), Positives = 196/327 (59%), Gaps = 19/327 (5%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS ++S + K LII ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYM--TLRTPY-IRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + T Y + +I +R+ +
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKSYPVHIAKITRAVRVGTEGF 158
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMNA---EEGRIIPAN-----------IEELLD 514
+ + S+ ++ E + I K+ + L EGR + IEELL+
Sbjct: 159 LES-MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLSEEKLFITQQRMQKIEELLE 217
Query: 515 KVCSENPLDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVR 694
KVCSENPLDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++
Sbjct: 218 KVCSENPLDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIK 276
Query: 695 PSKSKHSAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWF 874
PSKS H APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K F
Sbjct: 277 PSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIF 336
Query: 875 STFDCKSGFYQIRLTEESKALTAFSCP 955
S+FDCKSGF+Q+ L +ES+ LTAF+CP
Sbjct: 337 SSFDCKSGFWQVLLDQESRPLTAFTCP 363
>BAO53421.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 246 bits (628), Expect = 1e-72
Identities = 139/327 (42%), Positives = 196/327 (59%), Gaps = 19/327 (5%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS ++S + K LII ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYM--TLRTPY-IRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + T Y + ++ +R+ +
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKSYPVHIAKLTRAVRVGTEGF 158
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMNA---EEGRIIPAN-----------IEELLD 514
+ + S+ ++ E + I K+ + L EGR + IEELL+
Sbjct: 159 LEA-MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLSEEKLFITQQRMQKIEELLE 217
Query: 515 KVCSENPLDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVR 694
KVCSENPLDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++
Sbjct: 218 KVCSENPLDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIK 276
Query: 695 PSKSKHSAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWF 874
PSKS H APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K F
Sbjct: 277 PSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIF 336
Query: 875 STFDCKSGFYQIRLTEESKALTAFSCP 955
S+FDCKSGF+Q+ L +ES+ LTAF+CP
Sbjct: 337 SSFDCKSGFWQVLLDQESRPLTAFTCP 363
>Q02964.1 RecName: Full=Enzymatic polyprotein; Includes: RecName: Full=Aspartic
protease; Includes: RecName: Full=Endonuclease; Includes:
RecName: Full=Reverse transcriptase AAA62375.1 reverse
transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 246 bits (627), Expect = 2e-72
Identities = 139/327 (42%), Positives = 196/327 (59%), Gaps = 19/327 (5%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS ++S + K LII ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAREIF 98
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYM--TLRTPY-IRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + T Y + ++ +R+ +
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKSYPVHIAKLTRAVRVGTEGF 158
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMNA---EEGRIIPAN-----------IEELLD 514
+ + S+ ++ E + I K+ + L EGR + IEELL+
Sbjct: 159 LES-MKKRSKTQQPEPVNISTNKIENPLKEIAILSEGRRLSEEKLFITQQRMQKIEELLE 217
Query: 515 KVCSENPLDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVR 694
KVCSENPLDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++
Sbjct: 218 KVCSENPLDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIK 276
Query: 695 PSKSKHSAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWF 874
PSKS H APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K F
Sbjct: 277 PSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIF 336
Query: 875 STFDCKSGFYQIRLTEESKALTAFSCP 955
S+FDCKSGF+Q+ L +ES+ LTAF+CP
Sbjct: 337 SSFDCKSGFWQVLLDQESRPLTAFTCP 363
>BAO53379.1 reverse transcriptase [Cauliflower mosaic virus] BAO53414.1 reverse
transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 246 bits (627), Expect = 2e-72
Identities = 139/327 (42%), Positives = 196/327 (59%), Gaps = 19/327 (5%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS ++S + K LII ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYM--TLRTPY-IRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + T Y + ++ +R+ +
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKSYPVHIAKLTRAVRVGTEGF 158
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMNA---EEGRIIPAN-----------IEELLD 514
+ + S+ ++ E + I K+ + L EGR + IEELL+
Sbjct: 159 LES-MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLSEEKLFITQQRMQKIEELLE 217
Query: 515 KVCSENPLDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVR 694
KVCSENPLDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++
Sbjct: 218 KVCSENPLDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIK 276
Query: 695 PSKSKHSAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWF 874
PSKS H APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K F
Sbjct: 277 PSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIF 336
Query: 875 STFDCKSGFYQIRLTEESKALTAFSCP 955
S+FDCKSGF+Q+ L +ES+ LTAF+CP
Sbjct: 337 SSFDCKSGFWQVLLDQESRPLTAFTCP 363
>NP_056728.1 reverse transcriptase [Cauliflower mosaic virus] P03554.1 RecName:
Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase CAA23460.1 unnamed protein product
[Cauliflower mosaic virus]
Length = 679
Score = 246 bits (627), Expect = 2e-72
Identities = 139/327 (42%), Positives = 196/327 (59%), Gaps = 19/327 (5%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS ++S + K LII ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYM--TLRTPY-IRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + T Y + ++ +R+ +
Sbjct: 99 RIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKSYPVHIAKLTRAVRVGTEGF 158
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMNA---EEGRIIPAN-----------IEELLD 514
+ + S+ ++ E + I K+ + L EGR + IEELL+
Sbjct: 159 LES-MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLSEEKLFITQQRMQKIEELLE 217
Query: 515 KVCSENPLDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVR 694
KVCSENPLDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++
Sbjct: 218 KVCSENPLDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIK 276
Query: 695 PSKSKHSAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWF 874
PSKS H APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K F
Sbjct: 277 PSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIF 336
Query: 875 STFDCKSGFYQIRLTEESKALTAFSCP 955
S+FDCKSGF+Q+ L +ES+ LTAF+CP
Sbjct: 337 SSFDCKSGFWQVLLDQESRPLTAFTCP 363
>APG80689.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 245 bits (626), Expect = 2e-72
Identities = 139/327 (42%), Positives = 196/327 (59%), Gaps = 19/327 (5%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS ++S + K LII ++F
Sbjct: 39 ELHCFVDTGASLCIASKFVIPEEHWVNAERPIMVKIADGSSITISKVCKDIDLIIAGEIF 98
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYM--TLRTPY-IRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + T Y + ++ +R+ +
Sbjct: 99 KIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKNKSYPVHIAKLTRAVRVGTEGF 158
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMNA---EEGRIIPAN-----------IEELLD 514
+ + S+ ++ E + I K+ + L EGR + IEELL+
Sbjct: 159 LES-MKKRSKTQQPEPVNISTNKIENPLEEIAILSEGRRLSEEKLFITQQRMQKIEELLE 217
Query: 515 KVCSENPLDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVR 694
KVCSENPLDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++
Sbjct: 218 KVCSENPLDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIK 276
Query: 695 PSKSKHSAPAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWF 874
PSKS H APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K F
Sbjct: 277 PSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIF 336
Query: 875 STFDCKSGFYQIRLTEESKALTAFSCP 955
S+FDCKSGF+Q+ L +ES+ LTAF+CP
Sbjct: 337 SSFDCKSGFWQVLLDQESRPLTAFTCP 363
>BAO53603.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 245 bits (625), Expect = 3e-72
Identities = 137/320 (42%), Positives = 195/320 (60%), Gaps = 12/320 (3%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS +++ + K LII ++F
Sbjct: 41 ELHCFVDTGASLCIASKFVIPEEHWINAERPIMVKIADGSSITINKVCKDIDLIIAGEIF 100
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTL---RTPYIRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + RT + ++ +R+ +
Sbjct: 101 HIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKDRTYPVHIAKLTRAVRVGTEGF 160
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMN---AEEGRIIPAN----IEELLDKVCSENP 535
+ + S+ ++ E + I K+ + +EE I IEELL+KVCSENP
Sbjct: 161 LES-MKKRSKTQQPEPVNISTNKIAVLSEGRRLSEEKLFITQQRMQKIEELLEKVCSENP 219
Query: 536 LDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVRPSKSKHS 715
LDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++PSKS H
Sbjct: 220 LDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHM 278
Query: 716 APAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKS 895
APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K FS+FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 338
Query: 896 GFYQIRLTEESKALTAFSCP 955
GF+Q+ L +ES+ LTAF+CP
Sbjct: 339 GFWQVLLDQESRPLTAFTCP 358
>BAO53547.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 245 bits (625), Expect = 3e-72
Identities = 137/320 (42%), Positives = 195/320 (60%), Gaps = 12/320 (3%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS +++ + K LII ++F
Sbjct: 41 ELHCFVDTGASLCIASKFVIPEEHWINAERPIMVKIADGSSITINKVCKDIDLIIAGEIF 100
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTL---RTPYIRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + RT + ++ +R+ +
Sbjct: 101 HIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKDRTYPVHIAKLTRAVRVGTEGF 160
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMN---AEEGRIIPAN----IEELLDKVCSENP 535
+ + S+ ++ E + I K+ + +EE I IEELL+KVCSENP
Sbjct: 161 LES-MKKRSKTQQPEPVNISTNKIAVLSEGRRLSEEKLFITQQRMQKIEELLEKVCSENP 219
Query: 536 LDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVRPSKSKHS 715
LDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++PSKS H
Sbjct: 220 LDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHM 278
Query: 716 APAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKS 895
APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K FS+FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 338
Query: 896 GFYQIRLTEESKALTAFSCP 955
GF+Q+ L +ES+ LTAF+CP
Sbjct: 339 GFWQVLLDQESRPLTAFTCP 358
>BAO53456.1 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 245 bits (625), Expect = 3e-72
Identities = 137/320 (42%), Positives = 195/320 (60%), Gaps = 12/320 (3%)
Frame = +2
Query: 32 ETEAYVDTGASICIATKALF--DKWEKVRNPARVSIADGSVHSLSWIAKKTTLIIENKLF 205
E +VDTGAS+CIA+K + + W P V IADGS +++ + K LII ++F
Sbjct: 41 ELHCFVDTGASLCIASKFVIPEEHWINAERPIMVKIADGSSITINKVCKDIDLIIAGEIF 100
Query: 206 IIPIIYQQQTGVDMILGNNFLRLYAPFCQYLNYMTL---RTPYIRGKQIREIIRIPILHY 376
IP +YQQ++G+D I+GNNF +LY PF Q+ + + RT + ++ +R+ +
Sbjct: 101 HIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIFTKDRTYPVHIAKLTRAVRVGTEGF 160
Query: 377 TKCHYSEFSQLKRGEIIGIVCKKMRHVLMN---AEEGRIIPAN----IEELLDKVCSENP 535
+ + S+ ++ E + I K+ + +EE I IEELL+KVCSENP
Sbjct: 161 LES-MKKRSKTQQPEPVNISTNKIAILSEGRRLSEEKLFITQQRMQKIEELLEKVCSENP 219
Query: 536 LDPKINNKNTELVELKLKDPIKEIKCKPMIYTKQDRDEFAEDIKQMCEKGLVRPSKSKHS 715
LDP K +KL DP K IK KPM Y+ DR+EF + IK++ + +++PSKS H
Sbjct: 220 LDPN-KTKQWMKASIKLSDPSKAIKVKPMKYSPMDREEFDKQIKELLDLKVIKPSKSPHM 278
Query: 716 APAFYVENHNEIKRGKRRMVINYKQMNDAMEGDAYFLPRKDLIIERVRNMKWFSTFDCKS 895
APAF V N E +RGK+RMV+NYK MN A GDAY LP KD ++ +R K FS+FDCKS
Sbjct: 279 APAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKS 338
Query: 896 GFYQIRLTEESKALTAFSCP 955
GF+Q+ L +ES+ LTAF+CP
Sbjct: 339 GFWQVLLDQESRPLTAFTCP 358