BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00016317
         (228 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_024584177.1 MULTISPECIES: HAMP domain-containing histidine ki...    88   1e-18
SFV11599.1 two-component system, NtrC family, nitrogen regulatio...    81   3e-16
WP_028339783.1 HAMP domain-containing histidine kinase [Bradyrhi...    78   5e-15
WP_038386744.1 HAMP domain-containing histidine kinase [Bradyrhi...    77   9e-15
WP_018271701.1 HAMP domain-containing histidine kinase [Bradyrhi...    76   2e-14
SEC05863.1 two-component system, NtrC family, nitrogen regulatio...    76   2e-14
WP_050385343.1 HAMP domain-containing histidine kinase [Bradyrhi...    76   2e-14
WP_028331956.1 HAMP domain-containing histidine kinase [Bradyrhi...    76   2e-14
WP_069276680.1 PAS domain-containing sensor histidine kinase [Br...    76   2e-14
WP_050626485.1 HAMP domain-containing histidine kinase [Bradyrhi...    75   4e-14
WP_076859544.1 PAS domain-containing sensor histidine kinase [Br...    75   6e-14
WP_074127148.1 PAS domain-containing sensor histidine kinase [Br...    74   1e-13
WP_050404526.1 PAS domain-containing sensor histidine kinase [Br...    73   3e-13
WP_057016578.1 MULTISPECIES: PAS domain-containing sensor histid...    72   7e-13
SDD96689.1 two-component system, NtrC family, nitrogen regulatio...    70   2e-12
WP_074076959.1 PAS domain-containing sensor histidine kinase [Br...    69   6e-12
WP_011087261.1 PAS domain-containing sensor histidine kinase [Br...    69   6e-12
EIG56156.1 PAS domain S-box [Bradyrhizobium sp. WSM1253]               59   3e-08
SCB34056.1 two-component system, NtrC family, nitrogen regulatio...    58   4e-08
WP_029084143.1 HAMP domain-containing histidine kinase [Bradyrhi...    55   3e-07

>WP_024584177.1 MULTISPECIES: HAMP domain-containing histidine kinase
           [Bradyrhizobium] KIU48262.1 ATPase [Bradyrhizobium
           elkanii] OCX30737.1 PAS domain-containing sensor
           histidine kinase [Bradyrhizobium sp. UASWS1016]
          Length = 811

 Score = 88.2 bits (217), Expect = 1e-18
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTLHASAPAEPNKAARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLHASAPAEPNKAARGFPLRRWLAPFAVAIALLSAFL 46


>SFV11599.1 two-component system, NtrC family, nitrogen regulation sensor
           histidine kinase NtrY [Bradyrhizobium arachidis]
          Length = 835

 Score = 81.3 bits (199), Expect = 3e-16
 Identities = 43/76 (56%), Positives = 55/76 (72%)
 Frame = -1

Query: 228 PRKCRNSATL*YDCISPQFPRAIAISSIAGMTSADTTASTLHASAPAEPNKAARGFALRR 49
           PR CRNSAT+ Y+ IS + PR +  S+IAGMTSADT+A+    + P EP    R +++RR
Sbjct: 10  PRNCRNSATMWYEYISIRPPRTLVFSTIAGMTSADTSAAHFDTAPPEEP----RRWSVRR 65

Query: 48  WLAPFAVAIALLSAFL 1
           WLAP AVA+ALLSA L
Sbjct: 66  WLAPLAVAMALLSALL 81


>WP_028339783.1 HAMP domain-containing histidine kinase [Bradyrhizobium elkanii]
          Length = 823

 Score = 77.8 bits (190), Expect = 5e-15
 Identities = 41/46 (89%), Positives = 42/46 (91%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTLHAS PAEPN  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLHAS-PAEPNAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_038386744.1 HAMP domain-containing histidine kinase [Bradyrhizobium elkanii]
          Length = 823

 Score = 77.0 bits (188), Expect = 9e-15
 Identities = 40/46 (86%), Positives = 42/46 (91%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTAST+HAS PAEPN  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTIHAS-PAEPNAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_018271701.1 HAMP domain-containing histidine kinase [Bradyrhizobium elkanii]
          Length = 819

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 40/46 (86%), Positives = 41/46 (89%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTLHA  PAEPN  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLHAP-PAEPNAEARGFPLRRWLAPFAVAIALLSAFL 45


>SEC05863.1 two-component system, NtrC family, nitrogen regulation sensor
           histidine kinase NtrY [Bradyrhizobium erythrophlei]
          Length = 822

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 40/46 (86%), Positives = 41/46 (89%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTLHA  PAEPN  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLHAP-PAEPNAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_050385343.1 HAMP domain-containing histidine kinase [Bradyrhizobium pachyrhizi]
          Length = 823

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 40/46 (86%), Positives = 41/46 (89%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTLHA  PAEPN  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLHAP-PAEPNAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_028331956.1 HAMP domain-containing histidine kinase [Bradyrhizobium elkanii]
          Length = 823

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 40/46 (86%), Positives = 41/46 (89%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTLHA  PAEPN  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLHAP-PAEPNAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_069276680.1 PAS domain-containing sensor histidine kinase [Bradyrhizobium
           elkanii] ODM77837.1 PAS domain-containing sensor
           histidine kinase [Bradyrhizobium elkanii] ODM81707.1 PAS
           domain-containing sensor histidine kinase
           [Bradyrhizobium elkanii]
          Length = 827

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 40/46 (86%), Positives = 41/46 (89%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTLHA  PAEPN  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLHAP-PAEPNAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_050626485.1 HAMP domain-containing histidine kinase [Bradyrhizobium
           viridifuturi]
          Length = 815

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 40/46 (86%), Positives = 40/46 (86%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSADTTASTLHA  PAEP   ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSADTTASTLHAP-PAEPTAKARGFPLRRWLAPFAVAIALLSAFL 45


>WP_076859544.1 PAS domain-containing sensor histidine kinase [Bradyrhizobium sp.
           SEMIA 6399]
          Length = 815

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 39/46 (84%), Positives = 41/46 (89%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTAST+HAS PAEP   ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTIHAS-PAEPKAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_074127148.1 PAS domain-containing sensor histidine kinase [Bradyrhizobium sp.
           NAS96.2] OKO78969.1 ATPase [Bradyrhizobium sp. NAS96.2]
          Length = 815

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 39/46 (84%), Positives = 41/46 (89%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTLHA  PAEP+  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLHAP-PAEPHAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_050404526.1 PAS domain-containing sensor histidine kinase [Bradyrhizobium
           embrapense]
          Length = 815

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 39/46 (84%), Positives = 40/46 (86%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTLHAS  AEP   ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLHAST-AEPTAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_057016578.1 MULTISPECIES: PAS domain-containing sensor histidine kinase
           [Bradyrhizobium] KRQ09513.1 ATPase [Bradyrhizobium
           pachyrhizi] OMI07214.1 PAS domain-containing sensor
           histidine kinase [Bradyrhizobium sp. UFLA 03-321]
          Length = 828

 Score = 71.6 bits (174), Expect = 7e-13
 Identities = 36/46 (78%), Positives = 39/46 (84%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTL A +  +PN  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLRAPSAEQPNAEARGFPLRRWLAPFAVAIALLSAFL 46


>SDD96689.1 two-component system, NtrC family, nitrogen regulation sensor
           histidine kinase NtrY [Bradyrhizobium sp. R5]
          Length = 831

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 38/46 (82%), Positives = 40/46 (86%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTASTL A + AEPN  ARGF LRRWLAPFAVAIALLSAFL
Sbjct: 1   MTSAETTASTLRAPS-AEPNAEARGFPLRRWLAPFAVAIALLSAFL 45


>WP_074076959.1 PAS domain-containing sensor histidine kinase [Bradyrhizobium
           diazoefficiens] APO53387.1 PAS domain-containing sensor
           histidine kinase [Bradyrhizobium diazoefficiens]
          Length = 848

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -1

Query: 228 PRKCRNSATL*YDCISPQFPRAIAISS-IAGMTSADTTASTLHASAPAEPNKAARGFALR 52
           PR CRNSAT+ Y+ IS +  R    S+ IAGMTSADT+A++   +   EP    R ++ R
Sbjct: 10  PRNCRNSATMWYEYISIRRRRGPPFSAPIAGMTSADTSAASFDTAPAEEP----RRWSPR 65

Query: 51  RWLAPFAVAIALLSAFL 1
           RWLAPFAVA+ALLS  L
Sbjct: 66  RWLAPFAVALALLSGLL 82


>WP_011087261.1 PAS domain-containing sensor histidine kinase [Bradyrhizobium
           diazoefficiens] NP_771129.1 two-component sensor
           histidine kinase [Bradyrhizobium diazoefficiens USDA
           110] BAC49754.1 two-component sensor histidine kinase
           [Bradyrhizobium diazoefficiens USDA 110]
          Length = 848

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -1

Query: 228 PRKCRNSATL*YDCISPQFPRAIAISS-IAGMTSADTTASTLHASAPAEPNKAARGFALR 52
           PR CRNSAT+ Y+ IS +  R    S+ IAGMTSADT+A++   +   EP    R ++ R
Sbjct: 10  PRNCRNSATMWYEYISIRRRRGPLFSAPIAGMTSADTSAASFDTAPAEEP----RRWSPR 65

Query: 51  RWLAPFAVAIALLSAFL 1
           RWLAPFAVA+ALLS  L
Sbjct: 66  RWLAPFAVALALLSGLL 82


>EIG56156.1 PAS domain S-box [Bradyrhizobium sp. WSM1253]
          Length = 818

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 34/65 (52%), Positives = 44/65 (67%)
 Frame = -1

Query: 195 YDCISPQFPRAIAISSIAGMTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIAL 16
           Y+ IS + PR    + IAGMTSADT+A++   +   EP    R ++ RRWLAPFAVA+AL
Sbjct: 3   YEYISIRPPRTPFSAPIAGMTSADTSAASFDTAPAEEP----RRWSARRWLAPFAVALAL 58

Query: 15  LSAFL 1
           LSA L
Sbjct: 59  LSACL 63


>SCB34056.1 two-component system, NtrC family, nitrogen regulation sensor
           histidine kinase NtrY [Bradyrhizobium yuanmingense]
          Length = 845

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
 Frame = -1

Query: 177 QFPRAIA--ISSIAGMTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAF 4
           Q+PR      S IAGMTSADT+A+    +   EP    R +++RRWLAPFAVA+ALLSAF
Sbjct: 29  QYPRVRGPVFSIIAGMTSADTSAAHFDTAPAEEP----RRWSVRRWLAPFAVALALLSAF 84

Query: 3   L 1
           L
Sbjct: 85  L 85


>WP_029084143.1 HAMP domain-containing histidine kinase [Bradyrhizobium sp. th.b2]
          Length = 811

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 30/46 (65%), Positives = 33/46 (71%)
 Frame = -1

Query: 138 MTSADTTASTLHASAPAEPNKAARGFALRRWLAPFAVAIALLSAFL 1
           MTSA+TTA+TL AS  AEP    +GF LRRWLAPFA   AL SA L
Sbjct: 1   MTSAETTATTLDASPAAEP----KGFPLRRWLAPFAAVTALFSALL 42