BLASTX nr result

ID: Glycyrrhiza30_contig00014046 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00014046
         (278 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU48474.1 hypothetical protein TSUD_405670 [Trifolium subterran...    64   6e-10
XP_004497514.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplas...    63   1e-09
KHN48247.1 Ribonucleoprotein, chloroplastic [Glycine soja]             56   4e-07
NP_001240946.1 uncharacterized protein LOC100812934 [Glycine max...    56   4e-07
XP_003535181.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplas...    55   5e-07

>GAU48474.1 hypothetical protein TSUD_405670 [Trifolium subterraneum]
          Length = 278

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 32/43 (74%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
 Frame = +3

Query: 156 MSTTAASLALPTLQTRKPLCSSPQCLSS--RFSLNPNFKPFSI 278
           MST+A SLALP+L T+ PLCSSPQC SS    SLNPNFKPFSI
Sbjct: 1   MSTSATSLALPSLFTKNPLCSSPQCFSSLPSLSLNPNFKPFSI 43


>XP_004497514.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Cicer
           arietinum]
          Length = 284

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 32/43 (74%), Positives = 38/43 (88%), Gaps = 2/43 (4%)
 Frame = +3

Query: 156 MSTTAASLALPTLQTRKPLCSSPQCLSSR--FSLNPNFKPFSI 278
           MS++AASLALPTL+T++PLC SPQC SS   FS+NPNFKPFSI
Sbjct: 1   MSSSAASLALPTLRTKQPLC-SPQCFSSHPSFSINPNFKPFSI 42


>KHN48247.1 Ribonucleoprotein, chloroplastic [Glycine soja]
          Length = 279

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
 Frame = +3

Query: 156 MSTTAASLALPTL--QTRKPLCSSPQCLSSRFSLNPNFKPFSI 278
           MST+AASLALPTL  +TR+PLCS PQC SS  SL PN KP SI
Sbjct: 1   MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNSKPISI 42


>NP_001240946.1 uncharacterized protein LOC100812934 [Glycine max] ACU20155.1
           unknown [Glycine max] KRH19946.1 hypothetical protein
           GLYMA_13G145200 [Glycine max]
          Length = 279

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
 Frame = +3

Query: 156 MSTTAASLALPTL--QTRKPLCSSPQCLSSRFSLNPNFKPFSI 278
           MST+AASLALPTL  +TR+PLCS PQC SS  SL PN KP SI
Sbjct: 1   MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNSKPISI 42


>XP_003535181.1 PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Glycine max]
           KRH32548.1 hypothetical protein GLYMA_10G058500 [Glycine
           max]
          Length = 275

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 31/43 (72%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
 Frame = +3

Query: 156 MSTTAASLALPTL--QTRKPLCSSPQCLSSRFSLNPNFKPFSI 278
           MST+AASLALPTL  +TR+PLCS PQC SS  SL PN KP SI
Sbjct: 1   MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNNKPISI 42


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