BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00012546
         (444 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_861409.1 putative capsid protein [Cestrum yellow leaf curling...    81   5e-15
CAD79321.2 coat protein, partial [Carnation etched ring virus]         73   8e-13
AEQ49588.1 coat protein [Blueberry red ringspot virus]                 74   9e-13
AJM71348.1 coat protein, partial [Blueberry red ringspot virus]        74   9e-13
AEH95572.1 coat protein [Blueberry red ringspot virus] AFL90599....    74   1e-12
NP_395468.1 putative coat protein [Blueberry red ringspot virus]...    74   2e-12
AJM71347.1 coat protein [Blueberry red ringspot virus]                 74   2e-12
AFL90603.2 coat protein [Blueberry red ringspot virus] AFL90604....    74   2e-12
AFL90602.2 coat protein [Blueberry red ringspot virus]                 74   2e-12
ADY76948.1 coat protein, partial [Carnation etched ring virus] A...    73   3e-12
AFL90610.2 coat protein [Blueberry red ringspot virus]                 73   3e-12
AFL90608.2 coat protein [Blueberry red ringspot virus]                 73   3e-12
AEE01491.1 coat protein [Blueberry red ringspot virus]                 73   3e-12
CAH68828.1 coat protein [Carnation etched ring virus]                  73   3e-12
NP_612576.1 Coat protein [Carnation etched ring virus] P05399.1 ...    73   3e-12
AMN10079.1 coat protein [Angelica bushy stunt virus]                   73   3e-12
AFL90612.2 coat protein [Blueberry red ringspot virus]                 71   1e-11
AFL90611.2 coat protein [Blueberry red ringspot virus]                 71   1e-11
AFL90607.2 coat protein [Blueberry red ringspot virus]                 71   1e-11
AAD37340.1 capsid protein [Cauliflower mosaic virus]                   70   2e-11

>NP_861409.1 putative capsid protein [Cestrum yellow leaf curling virus]
           Q7TD09.1 RecName: Full=Capsid protein; Short=CP;
           AltName: Full=coat protein AAP78923.1 putative capsid
           protein [Cestrum yellow leaf curling virus]
          Length = 501

 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
 Frame = -3

Query: 442 ANTLGGVIQIVYEEMRNQCLARATIRQLNRGRNEICCDLPELELPGNYGCXXXXXXXXXX 263
           ANTLGG I IV   +  +C+ R+  R +  G  +ICC     E+P  YGC          
Sbjct: 327 ANTLGGAIDIVRRTIDEECIQRSYRRTIG-GAVKICCK-GNPEIPQRYGCYDITKRKKTS 384

Query: 262 XXXXXXXXXXXXXXXXXXXXXXXXXXXRQIP-----RKYCPKGKKKCMCWLCNQEGHYAN 98
                                      ++       +K+CP GKK C CW+C++EGHYAN
Sbjct: 385 KKKWKKRSYKPDLWKKKKRFFKRRDFSKKKKENPGKKKFCPTGKKSCKCWICHEEGHYAN 444

Query: 97  ECPQRKEKDVKEKSKLIERI*QIYDLEPLEEE 2
           ECP++ ++  K+K KL+    +    EPLE E
Sbjct: 445 ECPKKTKEKHKDKVKLLMEA-EEEGFEPLESE 475


>CAD79321.2 coat protein, partial [Carnation etched ring virus]
          Length = 235

 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 34/53 (64%), Positives = 39/53 (73%)
 Frame = -3

Query: 166 KYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           KYCPKGKK C CW+CN EGHYANECP R+     EK KLI+ I + Y LEP+E
Sbjct: 150 KYCPKGKKTCRCWVCNIEGHYANECPNRQ---TSEKFKLIQ-IAENYGLEPIE 198


>AEQ49588.1 coat protein [Blueberry red ringspot virus]
          Length = 484

 Score = 74.3 bits (181), Expect = 9e-13
 Identities = 29/56 (51%), Positives = 46/56 (82%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLEEE 2
           +KYCPKGKK+C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E +
Sbjct: 389 QKYCPKGKKECKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIEND 441


>AJM71348.1 coat protein, partial [Blueberry red ringspot virus]
          Length = 487

 Score = 74.3 bits (181), Expect = 9e-13
 Identities = 29/56 (51%), Positives = 46/56 (82%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLEEE 2
           +KYCPKGKK+C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E +
Sbjct: 392 QKYCPKGKKECKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIEND 444


>AEH95572.1 coat protein [Blueberry red ringspot virus] AFL90599.2 coat protein
           [Blueberry red ringspot virus]
          Length = 495

 Score = 74.3 bits (181), Expect = 1e-12
 Identities = 29/56 (51%), Positives = 46/56 (82%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLEEE 2
           +KYCPKGKK+C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E +
Sbjct: 400 QKYCPKGKKECKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIEND 452


>NP_395468.1 putative coat protein [Blueberry red ringspot virus] AAL13273.1
           putative coat protein [Blueberry red ringspot virus]
          Length = 486

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 29/56 (51%), Positives = 45/56 (80%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLEEE 2
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E +
Sbjct: 391 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIEND 443


>AJM71347.1 coat protein [Blueberry red ringspot virus]
          Length = 493

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 29/56 (51%), Positives = 45/56 (80%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLEEE 2
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E +
Sbjct: 398 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIEND 450


>AFL90603.2 coat protein [Blueberry red ringspot virus] AFL90604.2 coat protein
           [Blueberry red ringspot virus] AJM71346.1 coat protein
           [Blueberry red ringspot virus]
          Length = 494

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 29/56 (51%), Positives = 45/56 (80%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLEEE 2
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E +
Sbjct: 399 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIEND 451


>AFL90602.2 coat protein [Blueberry red ringspot virus]
          Length = 494

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 29/56 (51%), Positives = 45/56 (80%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLEEE 2
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E +
Sbjct: 399 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIEND 451


>ADY76948.1 coat protein, partial [Carnation etched ring virus] AEQ61913.1 coat
           protein, partial [Carnation etched ring virus]
          Length = 444

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 34/53 (64%), Positives = 39/53 (73%)
 Frame = -3

Query: 166 KYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           KYCPKGKK C CW+CN EGHYANECP R+     EK KLI+ I + Y LEP+E
Sbjct: 375 KYCPKGKKTCRCWVCNIEGHYANECPNRQ---TSEKFKLIQ-IAENYGLEPIE 423


>AFL90610.2 coat protein [Blueberry red ringspot virus]
          Length = 489

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 29/54 (53%), Positives = 44/54 (81%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E
Sbjct: 394 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIE 444


>AFL90608.2 coat protein [Blueberry red ringspot virus]
          Length = 489

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 29/54 (53%), Positives = 44/54 (81%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E
Sbjct: 394 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIE 444


>AEE01491.1 coat protein [Blueberry red ringspot virus]
          Length = 491

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 29/54 (53%), Positives = 44/54 (81%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ Q+ +LEP+E
Sbjct: 396 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSQV-NLEPIE 446


>CAH68828.1 coat protein [Carnation etched ring virus]
          Length = 493

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 34/53 (64%), Positives = 39/53 (73%)
 Frame = -3

Query: 166 KYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           KYCPKGKK C CW+CN EGHYANECP R+     EK KLI+ I + Y LEP+E
Sbjct: 408 KYCPKGKKTCRCWVCNIEGHYANECPNRQ---TSEKFKLIQ-IAENYGLEPIE 456


>NP_612576.1 Coat protein [Carnation etched ring virus] P05399.1 RecName:
           Full=Probable capsid protein; Short=CP; AltName:
           Full=Coat protein CAA28359.1 unnamed protein product
           [Carnation etched ring virus] prf||1301227D ORF 4
          Length = 494

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 34/53 (64%), Positives = 39/53 (73%)
 Frame = -3

Query: 166 KYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           KYCPKGKK C CW+CN EGHYANECP R+     EK KLI+ I + Y LEP+E
Sbjct: 409 KYCPKGKKTCRCWVCNIEGHYANECPNRQ---TSEKFKLIQ-IAENYGLEPIE 457


>AMN10079.1 coat protein [Angelica bushy stunt virus]
          Length = 528

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLEE 5
           +KYCPK KK C CW+CN+EGHYANECP RKE D   K K++E+I Q+ +  P+E+
Sbjct: 441 QKYCPKKKKNCRCWICNEEGHYANECPNRKEHD--SKVKVLEQILQM-EYIPVED 492


>AFL90612.2 coat protein [Blueberry red ringspot virus]
          Length = 492

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 28/54 (51%), Positives = 44/54 (81%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ ++ +LEP+E
Sbjct: 397 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSRV-NLEPIE 447


>AFL90611.2 coat protein [Blueberry red ringspot virus]
          Length = 492

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 28/54 (51%), Positives = 44/54 (81%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ ++ +LEP+E
Sbjct: 397 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSRV-NLEPIE 447


>AFL90607.2 coat protein [Blueberry red ringspot virus]
          Length = 492

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 28/54 (51%), Positives = 44/54 (81%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLE 8
           +KYCPKGKK C CW+C ++GHYANECP + ++  ++K KL+E++ ++ +LEP+E
Sbjct: 397 QKYCPKGKKDCKCWICQEDGHYANECPNKDKR--RDKVKLLEQLSRV-NLEPIE 447


>AAD37340.1 capsid protein [Cauliflower mosaic virus]
          Length = 503

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 30/55 (54%), Positives = 42/55 (76%)
 Frame = -3

Query: 169 RKYCPKGKKKCMCWLCNQEGHYANECPQRKEKDVKEKSKLIERI*QIYDLEPLEE 5
           +KYCPKGKK C CW+CN EGHYANECP R+   V EK+ ++++  ++  L+P+EE
Sbjct: 414 QKYCPKGKKDCRCWICNIEGHYANECPNRQ---VSEKAHILQQAEKL-GLQPIEE 464