BLASTX nr result

ID: Glycyrrhiza30_contig00012447 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00012447
         (495 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris ...   170   4e-52
OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]      79   3e-16
XP_002446122.1 hypothetical protein SORBIDRAFT_06g002025, partia...    59   3e-08
XP_002868452.1 predicted protein [Arabidopsis lyrata subsp. lyra...    53   4e-06

>NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] YP_004222369.1 hypothetical protein
           BevumaM_p136 (mitochondrion) [Beta vulgaris subsp.
           maritima] YP_004842174.1 hypothetical protein BemaM_p130
           (mitochondrion) [Beta macrocarpa] BAA99316.1 orf107b
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           CBJ14008.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBJ17584.1 hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
           CBJ20702.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBX24979.1 hypothetical
           protein (mitochondrion) [Beta macrocarpa] CBL54138.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 107

 Score =  170 bits (431), Expect = 4e-52
 Identities = 85/94 (90%), Positives = 88/94 (93%)
 Frame = +3

Query: 3   VGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSQAFSSTSPLQSSIKLAFPRRYEMG 182
           VGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPS+AFSST PLQSSIKLAF RR EMG
Sbjct: 15  VGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKLAFSRRSEMG 74

Query: 183 VFPSPIVCIGLASSRTKEAFWRARACRKADHYIS 284
           VFPSPIVCIGLASSR+K  + RARACRKADHYIS
Sbjct: 75  VFPSPIVCIGLASSRSK-LYLRARACRKADHYIS 107


>OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]
          Length = 81

 Score = 78.6 bits (192), Expect = 3e-16
 Identities = 38/55 (69%), Positives = 43/55 (78%)
 Frame = -2

Query: 311 FRCSRRSLLAYVVVGLPTRTRPPESLLGSGRSQADTYDRRRKDPHFIAPGERKFD 147
           ++    SLLAYVVV LP   RPPE LLGSGR QADTY+R R+DP+FIAP ERKFD
Sbjct: 15  YKSCSNSLLAYVVVELPALIRPPECLLGSGRRQADTYNRGREDPYFIAPEERKFD 69


>XP_002446122.1 hypothetical protein SORBIDRAFT_06g002025, partial [Sorghum
           bicolor]
          Length = 132

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 26/31 (83%), Positives = 26/31 (83%)
 Frame = +3

Query: 3   VGRPNHHTTRIDANPPRYRTCDSHRIRLAQR 95
           V RPNHHTT IDANPP YRTCDSHRIRL  R
Sbjct: 18  VSRPNHHTTCIDANPPPYRTCDSHRIRLTVR 48


>XP_002868452.1 predicted protein [Arabidopsis lyrata subsp. lyrata] EFH44711.1
           predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 96

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 29/48 (60%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
 Frame = -2

Query: 308 RCSRRSLLAYVVVGLPTRTRPPESLLGSGRSQA----DTYDRRRKDPH 177
           R     LLAYV+VGLPTRTRPPE LL     +A      YDRRRKDPH
Sbjct: 8   RVPAAGLLAYVMVGLPTRTRPPECLLFVVLDEAKPIHTIYDRRRKDPH 55


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