BLASTX nr result

ID: Glycyrrhiza30_contig00010090 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00010090
         (228 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAT82830.1 hypothetical protein VIGAN_03289900 [Vigna angularis ...    51   2e-06
XP_002887590.1 expressed protein [Arabidopsis lyrata subsp. lyra...    48   7e-06

>BAT82830.1 hypothetical protein VIGAN_03289900 [Vigna angularis var.
           angularis]
          Length = 124

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = -2

Query: 89  CLTFMSPVLSEILRSGLIINSSFRRRTHL 3
           C T MSPVLSEILRSG +INSS RRRTHL
Sbjct: 80  CFTLMSPVLSEILRSGFMINSSLRRRTHL 108


>XP_002887590.1 expressed protein [Arabidopsis lyrata subsp. lyrata] EFH63849.1
          expressed protein [Arabidopsis lyrata subsp. lyrata]
          Length = 53

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -2

Query: 83 TFMSPVLSEILRSGLIINSSFRRRTHL 3
          TFMSPV+SEILRSGL I+SS RRRTHL
Sbjct: 11 TFMSPVISEILRSGLTIDSSLRRRTHL 37


Top