BLASTX nr result
ID: Glycyrrhiza30_contig00009715
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza30_contig00009715
(247 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 78 4e-15
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 73 4e-13
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 72 5e-13
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 72 7e-13
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 72 9e-13
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 72 9e-13
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 72 9e-13
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 72 9e-13
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 72 9e-13
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 70 3e-12
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 70 3e-12
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 70 3e-12
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 70 3e-12
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 70 3e-12
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 70 3e-12
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 70 4e-12
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 69 6e-12
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName:
Full=RNA replication protein; AltName: Full=156 kDa
protein; AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 78.2 bits (191), Expect = 4e-15
Identities = 39/82 (47%), Positives = 48/82 (58%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQAPVNSDPATLPW 180
LG++R GGPLLP++T E ++AS + D P +P TLPW
Sbjct: 487 LGHSRCGGPLLPELTAKSTPVEQCPDLPPCPTKSQASPASSNPSGPDAQPTAQNPETLPW 546
Query: 181 VAWLPKLNAQGFEALEIQTDPS 246
VAWLPKLNA GFEALE+Q DPS
Sbjct: 547 VAWLPKLNALGFEALEVQHDPS 568
>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 72.8 bits (177), Expect = 4e-13
Identities = 44/85 (51%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQA---PVNSDPAT 171
LGNTR GGPLLPK + + SA T Q P DP T
Sbjct: 484 LGNTRCGGPLLPK-----GPAKLTTVEPCPDLPAENSANPEPPRKTTQTLDLPHPEDPTT 538
Query: 172 LPWVAWLPKLNAQGFEALEIQTDPS 246
LPWVAWLPKLNA GFEALEIQTDPS
Sbjct: 539 LPWVAWLPKLNALGFEALEIQTDPS 563
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 72.4 bits (176), Expect = 5e-13
Identities = 39/82 (47%), Positives = 43/82 (52%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQAPVNSDPATLPW 180
LG+ R GGPLLP T E + AS + D P P TLPW
Sbjct: 489 LGHLRCGGPLLPAPTQSCSPAEPCPDLPPSPVKSTASPASPDPNVLDAQPTTQAPETLPW 548
Query: 181 VAWLPKLNAQGFEALEIQTDPS 246
VAWLPKLNA GFEALE+Q DPS
Sbjct: 549 VAWLPKLNALGFEALEVQHDPS 570
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 72.0 bits (175), Expect = 7e-13
Identities = 43/83 (51%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGD-HTDQAPVNSDPATLP 177
LGNTR GGPLLP+ PD T A+ +Q + P DP TLP
Sbjct: 484 LGNTRCGGPLLPQ-RPDTST--VVEPCPDLPPETHAAPEPSQRNTQAPDLPSPQDPTTLP 540
Query: 178 WVAWLPKLNAQGFEALEIQTDPS 246
WVAWLPKLNA GFEALEIQ DPS
Sbjct: 541 WVAWLPKLNALGFEALEIQNDPS 563
>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 71.6 bits (174), Expect = 9e-13
Identities = 42/82 (51%), Positives = 45/82 (54%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQAPVNSDPATLPW 180
LGN R GGPLLPK P + R +D P DP+TLPW
Sbjct: 484 LGNARCGGPLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPW 541
Query: 181 VAWLPKLNAQGFEALEIQTDPS 246
VAWLPKLNA GFEALEIQTDPS
Sbjct: 542 VAWLPKLNALGFEALEIQTDPS 563
>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 71.6 bits (174), Expect = 9e-13
Identities = 42/82 (51%), Positives = 45/82 (54%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQAPVNSDPATLPW 180
LGN R GGPLLPK P + R +D P DP+TLPW
Sbjct: 484 LGNARCGGPLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPW 541
Query: 181 VAWLPKLNAQGFEALEIQTDPS 246
VAWLPKLNA GFEALEIQTDPS
Sbjct: 542 VAWLPKLNALGFEALEIQTDPS 563
>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 71.6 bits (174), Expect = 9e-13
Identities = 42/82 (51%), Positives = 45/82 (54%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQAPVNSDPATLPW 180
LGN R GGPLLPK P + R +D P DP+TLPW
Sbjct: 484 LGNARCGGPLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPW 541
Query: 181 VAWLPKLNAQGFEALEIQTDPS 246
VAWLPKLNA GFEALEIQTDPS
Sbjct: 542 VAWLPKLNALGFEALEIQTDPS 563
>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 71.6 bits (174), Expect = 9e-13
Identities = 42/82 (51%), Positives = 45/82 (54%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQAPVNSDPATLPW 180
LGN R GGPLLPK P + R +D P DP+TLPW
Sbjct: 484 LGNARCGGPLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPW 541
Query: 181 VAWLPKLNAQGFEALEIQTDPS 246
VAWLPKLNA GFEALEIQTDPS
Sbjct: 542 VAWLPKLNALGFEALEIQTDPS 563
>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 71.6 bits (174), Expect = 9e-13
Identities = 42/82 (51%), Positives = 45/82 (54%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQAPVNSDPATLPW 180
LGN R GGPLLPK P + R +D P DP+TLPW
Sbjct: 484 LGNARCGGPLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPW 541
Query: 181 VAWLPKLNAQGFEALEIQTDPS 246
VAWLPKLNA GFEALEIQTDPS
Sbjct: 542 VAWLPKLNALGFEALEIQTDPS 563
>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 70.1 bits (170), Expect = 3e-12
Identities = 42/83 (50%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGD-HTDQAPVNSDPATLP 177
LGN R GGPLLP+ PD T A+ +Q + P DP TLP
Sbjct: 484 LGNARCGGPLLPQ-RPDTST--VVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLP 540
Query: 178 WVAWLPKLNAQGFEALEIQTDPS 246
WVAWLPKLNA GFEALEIQ DPS
Sbjct: 541 WVAWLPKLNALGFEALEIQNDPS 563
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 70.1 bits (170), Expect = 3e-12
Identities = 42/83 (50%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGD-HTDQAPVNSDPATLP 177
LGN R GGPLLP+ PD T A+ +Q + P DP TLP
Sbjct: 484 LGNARCGGPLLPQ-RPDTST--VVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLP 540
Query: 178 WVAWLPKLNAQGFEALEIQTDPS 246
WVAWLPKLNA GFEALEIQ DPS
Sbjct: 541 WVAWLPKLNALGFEALEIQNDPS 563
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 70.1 bits (170), Expect = 3e-12
Identities = 42/83 (50%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGD-HTDQAPVNSDPATLP 177
LGN R GGPLLP+ PD T A+ +Q + P DP TLP
Sbjct: 484 LGNARCGGPLLPQ-RPDTST--VVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLP 540
Query: 178 WVAWLPKLNAQGFEALEIQTDPS 246
WVAWLPKLNA GFEALEIQ DPS
Sbjct: 541 WVAWLPKLNALGFEALEIQNDPS 563
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 70.1 bits (170), Expect = 3e-12
Identities = 42/83 (50%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGD-HTDQAPVNSDPATLP 177
LGN R GGPLLP+ PD T A+ +Q + P DP TLP
Sbjct: 484 LGNARCGGPLLPQ-RPDTST--VVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLP 540
Query: 178 WVAWLPKLNAQGFEALEIQTDPS 246
WVAWLPKLNA GFEALEIQ DPS
Sbjct: 541 WVAWLPKLNALGFEALEIQNDPS 563
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 70.1 bits (170), Expect = 3e-12
Identities = 40/82 (48%), Positives = 42/82 (51%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQAPVNSDPATLPW 180
LGN R GGPLLP+ PD A + P DP TLPW
Sbjct: 484 LGNARCGGPLLPQ-RPDTSTAVEPCPDLPPETHA-APEPSQRNTQAPNLPSPQDPTTLPW 541
Query: 181 VAWLPKLNAQGFEALEIQTDPS 246
VAWLPKLNA GFEALEIQ DPS
Sbjct: 542 VAWLPKLNALGFEALEIQNDPS 563
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 70.1 bits (170), Expect = 3e-12
Identities = 42/83 (50%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGD-HTDQAPVNSDPATLP 177
LGN R GGPLLP+ PD T A+ +Q + P DP TLP
Sbjct: 484 LGNARCGGPLLPQ-RPDTST--VVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLP 540
Query: 178 WVAWLPKLNAQGFEALEIQTDPS 246
WVAWLPKLNA GFEALEIQ DPS
Sbjct: 541 WVAWLPKLNALGFEALEIQNDPS 563
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 69.7 bits (169), Expect = 4e-12
Identities = 42/83 (50%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGD-HTDQAPVNSDPATLP 177
LGN R GGPLLP+ PD T A+ +Q + P DP TLP
Sbjct: 484 LGNARCGGPLLPQ-RPDTAT--VVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLP 540
Query: 178 WVAWLPKLNAQGFEALEIQTDPS 246
WVAWLPKLNA GFEALEIQ DPS
Sbjct: 541 WVAWLPKLNALGFEALEIQNDPS 563
>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 69.3 bits (168), Expect = 6e-12
Identities = 41/82 (50%), Positives = 44/82 (53%)
Frame = +1
Query: 1 LGNTRLGGPLLPKITPDEQDREXXXXXXXXXXXTKASATLNQGDHTDQAPVNSDPATLPW 180
LGN R G PLLPK P + R +D P DP+TLPW
Sbjct: 484 LGNARCGAPLLPK-GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSD-LPHPQDPSTLPW 541
Query: 181 VAWLPKLNAQGFEALEIQTDPS 246
VAWLPKLNA GFEALEIQTDPS
Sbjct: 542 VAWLPKLNALGFEALEIQTDPS 563