BLASTX nr result

ID: Glycyrrhiza30_contig00008363 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00008363
         (381 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAO16018.1 chloroplast biogenesis protein [Lotus japonicus]            77   4e-14
XP_004516451.1 PREDICTED: cytochrome c-type biogenesis ccda-like...    67   1e-10
XP_004516450.1 PREDICTED: cytochrome c-type biogenesis ccda-like...    62   6e-09
XP_016190381.1 PREDICTED: cytochrome c-type biogenesis ccda-like...    62   1e-08
KRH26036.1 hypothetical protein GLYMA_12G147300 [Glycine max]          58   2e-07
XP_006591900.1 PREDICTED: cytochrome c-type biogenesis ccda-like...    58   2e-07
NP_001240262.1 cytochrome c-type biogenesis ccda-like chloroplas...    58   2e-07
KHN16011.1 Cytochrome c-type biogenesis ccda-like chloroplastic ...    58   2e-07
GAU44355.1 hypothetical protein TSUD_371360 [Trifolium subterran...    57   5e-07
ACU23864.1 unknown [Glycine max]                                       55   2e-06
XP_003527280.1 PREDICTED: cytochrome c-type biogenesis ccda-like...    55   3e-06
XP_007133142.1 hypothetical protein PHAVU_011G155100g [Phaseolus...    55   3e-06
KHN46954.1 Proteasome subunit alpha type-6 [Glycine soja]              55   4e-06

>AAO16018.1 chloroplast biogenesis protein [Lotus japonicus]
          Length = 345

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 38/55 (69%), Positives = 40/55 (72%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           SMSYC SY LRLQ CRIANC  DR     HGRH+VPI+ HKK SEPEN LQS  K
Sbjct: 4   SMSYCGSYSLRLQPCRIANCNLDR-----HGRHVVPINVHKKASEPENCLQSDWK 53


>XP_004516451.1 PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
           protein 1 isoform X2 [Cicer arietinum]
          Length = 347

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 35/55 (63%), Positives = 41/55 (74%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           SMSYC++YGLRLQSCRI N   +R T   HGR+IVP ST KK +E EN L+SK K
Sbjct: 4   SMSYCNNYGLRLQSCRIENSNLNRHT--HHGRYIVPTSTIKKPTEHENCLESKWK 56


>XP_004516450.1 PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
           protein 1 isoform X1 [Cicer arietinum]
          Length = 348

 Score = 62.4 bits (150), Expect = 6e-09
 Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHG-RHIVPISTHKKTSEPENFLQSKLK 44
           SMSYC++YGLRLQSCRI N   +R T   HG R+IVP ST KK +E EN L+SK K
Sbjct: 4   SMSYCNNYGLRLQSCRIENSNLNRHT--HHGSRYIVPTSTIKKPTEHENCLESKWK 57


>XP_016190381.1 PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
           protein 2 [Arachis ipaensis] XP_016190382.1 PREDICTED:
           cytochrome c-type biogenesis ccda-like chloroplastic
           protein 2 [Arachis ipaensis] XP_016190383.1 PREDICTED:
           cytochrome c-type biogenesis ccda-like chloroplastic
           protein 2 [Arachis ipaensis] XP_016190384.1 PREDICTED:
           cytochrome c-type biogenesis ccda-like chloroplastic
           protein 2 [Arachis ipaensis] XP_016190385.1 PREDICTED:
           cytochrome c-type biogenesis ccda-like chloroplastic
           protein 2 [Arachis ipaensis]
          Length = 345

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           S SYC+SYGLRL+ C +ANC        RHGR+IVPI+T K+  + +N LQSKLK
Sbjct: 4   SASYCASYGLRLRPCGVANC-----NLERHGRNIVPINTSKELPKYDNCLQSKLK 53


>KRH26036.1 hypothetical protein GLYMA_12G147300 [Glycine max]
          Length = 308

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 29/55 (52%), Positives = 40/55 (72%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           SMS C SY L++++ RI +C   ++     GRHIVPI+TH+KTS+PEN L+SK K
Sbjct: 4   SMSLCGSYSLQIRNRRIVSCNLHQD-----GRHIVPINTHQKTSKPENCLRSKWK 53


>XP_006591900.1 PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
           protein 2-like isoform X2 [Glycine max]
          Length = 319

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 29/55 (52%), Positives = 40/55 (72%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           SMS C SY L++++ RI +C   ++     GRHIVPI+TH+KTS+PEN L+SK K
Sbjct: 4   SMSLCGSYSLQIRNRRIVSCNLHQD-----GRHIVPINTHQKTSKPENCLRSKWK 53


>NP_001240262.1 cytochrome c-type biogenesis ccda-like chloroplastic protein 2-like
           [Glycine max] XP_006591899.1 PREDICTED: cytochrome
           c-type biogenesis ccda-like chloroplastic protein 2-like
           isoform X1 [Glycine max] AAP81162.1 c-type cytochrome
           biogenesis protein [Glycine max] ACU18764.1 unknown
           [Glycine max] KRH26035.1 hypothetical protein
           GLYMA_12G147300 [Glycine max]
          Length = 344

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 29/55 (52%), Positives = 40/55 (72%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           SMS C SY L++++ RI +C   ++     GRHIVPI+TH+KTS+PEN L+SK K
Sbjct: 4   SMSLCGSYSLQIRNRRIVSCNLHQD-----GRHIVPINTHQKTSKPENCLRSKWK 53


>KHN16011.1 Cytochrome c-type biogenesis ccda-like chloroplastic protein 2,
           partial [Glycine soja]
          Length = 359

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 29/55 (52%), Positives = 40/55 (72%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           SMS C SY L++++ RI +C   ++     GRHIVPI+TH+KTS+PEN L+SK K
Sbjct: 19  SMSLCGSYSLQIRNRRIVSCNLHQD-----GRHIVPINTHQKTSKPENCLRSKWK 68


>GAU44355.1 hypothetical protein TSUD_371360 [Trifolium subterraneum]
          Length = 345

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 31/54 (57%), Positives = 35/54 (64%)
 Frame = -3

Query: 205 MSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           MSYCSS  LRLQSC I NC        +HGRHIVP +  KK +E E  L+SKLK
Sbjct: 5   MSYCSSNALRLQSCTITNC-----NLHQHGRHIVPTNALKKPTEHEISLRSKLK 53


>ACU23864.1 unknown [Glycine max]
          Length = 340

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = -3

Query: 205 MSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           MS C +YGL+LQ+ RI +C   ++     GRHIVPI+TH+K S+PE  L+SK K
Sbjct: 1   MSLCGNYGLQLQNRRIVSCNLHQD-----GRHIVPINTHQKPSKPEKCLRSKWK 49


>XP_003527280.1 PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
           protein [Glycine max] KRH55420.1 hypothetical protein
           GLYMA_06G254100 [Glycine max] KRH55421.1 hypothetical
           protein GLYMA_06G254100 [Glycine max]
          Length = 344

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           SMS C +Y L+LQ+ RI +C   ++     GRHIVPI+TH+K S+PE  L+SK K
Sbjct: 4   SMSLCGNYSLQLQNRRIVSCNLHQD-----GRHIVPINTHQKPSKPEKCLRSKWK 53


>XP_007133142.1 hypothetical protein PHAVU_011G155100g [Phaseolus vulgaris]
           ESW05136.1 hypothetical protein PHAVU_011G155100g
           [Phaseolus vulgaris]
          Length = 345

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           +MS C SY L+    RIA+C    +     GRHIVPISTH+K+SEP+N LQ K K
Sbjct: 4   NMSLCGSYSLQFPCRRIASCNLHSD-----GRHIVPISTHQKSSEPKNCLQPKWK 53


>KHN46954.1 Proteasome subunit alpha type-6 [Glycine soja]
          Length = 560

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = -3

Query: 208 SMSYCSSYGLRLQSCRIANCYHDRETESRHGRHIVPISTHKKTSEPENFLQSKLK 44
           SMS C +Y L+LQ+ RI +C   ++     GRHIVPI+TH+K S+PE  L+SK K
Sbjct: 220 SMSLCGNYSLQLQNRRIVSCNLHQD-----GRHIVPINTHQKPSKPEKCLRSKWK 269


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