BLASTX nr result

ID: Glycyrrhiza30_contig00007960 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00007960
         (466 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP74705.1 Pentatricopeptide repeat-containing protein At4g13650...    61   6e-08
XP_019427492.1 PREDICTED: putative pentatricopeptide repeat-cont...    60   2e-07
XP_016188951.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   4e-07
XP_015954426.1 PREDICTED: pentatricopeptide repeat-containing pr...    59   4e-07

>KYP74705.1 Pentatricopeptide repeat-containing protein At4g13650 family
           [Cajanus cajan]
          Length = 815

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +3

Query: 345 GDCTMNAALNEGLSIHEHHLKSGVDPYAHFWISLLNFSAK 464
           GDCT+  ALN+G +IH H LK+GV+P +HFW SL+NF AK
Sbjct: 10  GDCTLREALNDGKAIHGHQLKNGVEPDSHFWASLINFYAK 49


>XP_019427492.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330 [Lupinus angustifolius]
          Length = 978

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = +3

Query: 345 GDCTMNAALNEGLSIHEHHLKSGVDPYAHFWISLLNFSAK 464
           GDC +  +LNEG++IH H +K+GVD   HFWISL+NF AK
Sbjct: 111 GDCALRESLNEGMAIHGHRIKNGVDQDTHFWISLINFYAK 150


>XP_016188951.1 PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Arachis ipaensis] XP_016188952.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial-like [Arachis ipaensis]
           XP_016188953.1 PREDICTED: pentatricopeptide
           repeat-containing protein At3g24000, mitochondrial-like
           [Arachis ipaensis] XP_016188954.1 PREDICTED:
           pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Arachis ipaensis] XP_016188955.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial-like [Arachis ipaensis]
          Length = 963

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = +3

Query: 345 GDCTMNAALNEGLSIHEHHLKSGVDPYAHFWISLLNFSAK 464
           G+C +  ALNEG +IH H +K+GVDP +HFW+SL+N  AK
Sbjct: 95  GNCALRGALNEGKAIHGHQIKTGVDPDSHFWVSLINLYAK 134


>XP_015954426.1 PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Arachis duranensis] XP_015954427.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial-like [Arachis duranensis]
           XP_015954428.1 PREDICTED: pentatricopeptide
           repeat-containing protein At2g03880, mitochondrial-like
           [Arachis duranensis] XP_015954429.1 PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Arachis duranensis]
          Length = 963

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = +3

Query: 345 GDCTMNAALNEGLSIHEHHLKSGVDPYAHFWISLLNFSAK 464
           G+C +  ALNEG +IH H +K+GVDP +HFW+SL+N  AK
Sbjct: 95  GNCALRGALNEGKAIHGHQIKTGVDPDSHFWVSLINLYAK 134


Top