BLASTX nr result
ID: Glycyrrhiza30_contig00003309
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza30_contig00003309
(1906 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016690731.1 PREDICTED: uncharacterized protein LOC107907947 [... 234 1e-83
KYP64985.1 Retrovirus-related Pol polyprotein from transposon TN... 224 5e-82
KYP61041.1 Retrovirus-related Pol polyprotein from transposon TN... 236 5e-80
GAU46782.1 hypothetical protein TSUD_351810 [Trifolium subterran... 285 2e-79
GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterran... 219 2e-79
KYP53203.1 Retrovirus-related Pol polyprotein from transposon TN... 209 2e-79
GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterran... 284 3e-79
GAU31769.1 hypothetical protein TSUD_22150 [Trifolium subterraneum] 277 6e-77
AJY78067.1 putative polyprotein [Glycine max] 271 1e-76
KHN05285.1 Retrovirus-related Pol polyprotein from transposon TN... 274 8e-76
KYP36109.1 Retrovirus-related Pol polyprotein from transposon TN... 269 1e-74
KYP70579.1 Retrovirus-related Pol polyprotein from transposon TN... 241 3e-71
ABE88096.1 Integrase, catalytic region [Medicago truncatula] 187 6e-71
XP_012435315.1 PREDICTED: uncharacterized protein LOC105761928 [... 210 3e-69
KYP62795.1 Retrovirus-related Pol polyprotein from transposon TN... 234 1e-68
XP_004498431.2 PREDICTED: uncharacterized protein LOC101490285 [... 184 2e-67
KYP68633.1 Retrovirus-related Pol polyprotein from transposon TN... 248 3e-67
ABD32334.2 Polynucleotidyl transferase, Ribonuclease H fold [Med... 243 7e-67
GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterran... 248 8e-67
KYP51629.1 Retrovirus-related Pol polyprotein from transposon TN... 224 2e-66
>XP_016690731.1 PREDICTED: uncharacterized protein LOC107907947 [Gossypium hirsutum]
Length = 667
Score = 234 bits (597), Expect(2) = 1e-83
Identities = 110/221 (49%), Positives = 157/221 (71%)
Frame = -3
Query: 935 SKRMIGLAN*CEGLYSLVVDAKNAFVSSTARGSDSIPAEALWHFRLGHMSNKRLNLVHSQ 756
S +MIG+A GLY L A+ +S+ S + + +LWH RLGH+S+ RL L+
Sbjct: 343 SLKMIGIARVLHGLYILDSPAQTFSISTPIALSANTTSCSLWHHRLGHLSDSRLKLLFPY 402
Query: 755 FSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLT 576
+ + +N+ C CH A+ KK+ + ++ S + K +EL+H DIWGP S+ GH+YFLT
Sbjct: 403 IPSLSMSNNATCKACHLAKQKKISFSVSTSVSNKIFELVHVDIWGPTDVISITGHRYFLT 462
Query: 575 VLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKG 396
++DD+SRFTWIILLK+K++V+ H+Q+F T+VE ++ +KIK+I ++NG EF++P FY SKG
Sbjct: 463 IVDDFSRFTWIILLKAKSEVRTHIQNFFTLVETQFSSKIKVIRSNNGCEFVIPTFYASKG 522
Query: 395 IVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFF 273
++HQT+CVE+PQQNG VERK QHILNV RALLF S K F
Sbjct: 523 VIHQTTCVETPQQNGLVERKHQHILNVARALLFHSHLLKHF 563
Score = 106 bits (265), Expect(2) = 1e-83
Identities = 50/94 (53%), Positives = 65/94 (69%)
Frame = -2
Query: 282 KIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCFASTLTAHRTK 103
K FW +AVL+A +++NR P+PLL N P+ LY P I +FGCL FA+TLTAH K
Sbjct: 561 KHFWGHAVLHAVFLINRTPTPLLANLTPFDKLYQTKPSFQHICIFGCLFFATTLTAHHHK 620
Query: 102 LEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
L+PRAR VFLG VKG++L D+++ IFISR
Sbjct: 621 LDPRARDCVFLGFPPHVKGYILFDLSTHAIFISR 654
Score = 79.7 bits (195), Expect = 7e-12
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = -3
Query: 1643 PTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSIDPPSIMDPT 1464
P+S Y++HP++ P V V+PVL+ SNYH W+R+M SKNK +FVDG+I P DP
Sbjct: 9 PSSPYYLHPNENPALVLVSPVLSSSNYHSWSRAMTMVFLSKNKLQFVDGTITVPPRTDPL 68
Query: 1463 YTAWER 1446
Y+AWE+
Sbjct: 69 YSAWEQ 74
>KYP64985.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1394
Score = 224 bits (570), Expect(2) = 5e-82
Identities = 110/227 (48%), Positives = 154/227 (67%), Gaps = 9/227 (3%)
Frame = -3
Query: 944 EKNSKRMIGLAN*CEGLYSLV---------VDAKNAFVSSTARGSDSIPAEALWHFRLGH 792
+K+ +MIG A +GLY L V + S +++ ALWH RLGH
Sbjct: 418 QKSHFKMIGAARKIDGLYCLEESNDLNCTKVLQHSVINKSNISVVNAVNTGALWHHRLGH 477
Query: 791 MSNKRLNLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPIS 612
SN L L+ SQ++ + + + CD CH+A+HKKLP+ + +SK++ +EL+H DIWGP+
Sbjct: 478 TSNSILQLLSSQYNDIIYKNCTPCDTCHFAKHKKLPFPVCISKSSHLFELLHADIWGPLH 537
Query: 611 TSSVHGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGP 432
T S+ GHKYFLT++DD+SRFTW+ LLKSKA+V+ + F+ ++E ++ K+K + +DNG
Sbjct: 538 TISIDGHKYFLTLVDDFSRFTWVHLLKSKAEVKTVLPKFIHLIENQFGIKLKRLRSDNGK 597
Query: 431 EFLLPQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQS 291
EF L F+ SKGI H+TSC+E+PQQNG VERK QHILNV RALLFQS
Sbjct: 598 EFFLTDFFSSKGIFHETSCIETPQQNGIVERKHQHILNVARALLFQS 644
Score = 111 bits (278), Expect(2) = 5e-82
Identities = 47/104 (45%), Positives = 76/104 (73%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L+ +FWSYA+ +A +++NR+P+P L+NK PY ++G+ PDL+ +RVFGCL F
Sbjct: 638 RALLFQSGLSSVFWSYAIKHAVHLINRLPTPFLENKSPYESVFGKIPDLSTLRVFGCLAF 697
Query: 132 ASTLTAHRTKLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
A+T+T+ TKL+ RA K +FLG K GVKG++L ++ ++ +SR
Sbjct: 698 ANTITSGITKLDKRASKCIFLGFKPGVKGYLLFNLTTKSFLLSR 741
Score = 80.9 bits (198), Expect = 5e-12
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Frame = -2
Query: 1449 KAQILLMDPLPSINKVFSMVIHHERQNIQI-----VSDDSFVNAVDXXXXXXXXXXGYNQ 1285
++QI+++DP+PSI K FSMV+ HER+ I + V D A+ N
Sbjct: 157 RSQIMMLDPMPSIVKTFSMVLQHEREFIGLIPKHSVPDSLAFAAMSTNQPRFNSSDRTNS 216
Query: 1284 NFDGRNS--NKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYEQKDESSV 1111
N NS NK C C KT HT++ CY + G+P Y +KN + ++ A+ S + D ++
Sbjct: 217 NASKNNSKNNKFCEKCKKTNHTIETCYFRIGFPAGY-RKNKT--NNKASASLVEVDSNAS 273
Query: 1110 -----ADKEPKANLPTFTTEQYEKLLALIQ----GNGQSQHAMLTTQGSSS 985
D P + TF+ +QY LLAL+Q + H+ + G+SS
Sbjct: 274 LPHLDLDGSPTNDQFTFSKDQYHALLALLQHTKAHSSLVNHSSVHNSGTSS 324
>KYP61041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 788
Score = 236 bits (602), Expect(2) = 5e-80
Identities = 108/230 (46%), Positives = 164/230 (71%), Gaps = 5/230 (2%)
Frame = -3
Query: 947 QEKNSKRMIGLAN*CEGLYSLVVDAKNAFVSSTARG-----SDSIPAEALWHFRLGHMSN 783
Q N+ + IG+ + C GLY+L +A+ +S T S +P + LWHFRLGH S
Sbjct: 80 QYLNTLKRIGIVDVCNGLYTL--EARPVTMSPTCSSVIHPVSIVVPID-LWHFRLGHPSC 136
Query: 782 KRLNLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSS 603
KRL + Q+ ++ ++ N C CHY++ +KL + L++SK ++ +E+IH DIWGP S S
Sbjct: 137 KRLESMMKQYPYITINKNFSCSTCHYSKQRKLLFSLSISKTSRAFEIIHVDIWGPCSVIS 196
Query: 602 VHGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFL 423
+HGH+YFLT++DD++R+TW+ L+ SK++ + H+ +F+++VE+++D K+KII +DNG EFL
Sbjct: 197 MHGHRYFLTIVDDFTRYTWVYLMNSKSETRKHIINFISLVERQFDTKVKIIRSDNGAEFL 256
Query: 422 LPQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFF 273
+ FY+ KGI+HQTSC+E+P+QNG VERK QH+LNV RALLF + P F
Sbjct: 257 MNNFYQEKGIIHQTSCIETPEQNGIVERKHQHLLNVTRALLFHNGLPPLF 306
Score = 92.8 bits (229), Expect(2) = 5e-80
Identities = 40/95 (42%), Positives = 63/95 (66%)
Frame = -2
Query: 285 PKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCFASTLTAHRT 106
P +FW +A+ +A I+N +P+P+L P+ LY + D++ RVFGCLC+ STL A+R
Sbjct: 303 PPLFWCFAIQHAATIINCIPTPILHETSPFIKLYNKQYDISLFRVFGCLCYESTLVANRK 362
Query: 105 KLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
KL+ RA +FLG KN KG++L ++ + + +SR
Sbjct: 363 KLDARADPCIFLGFKNYTKGYLLYNLKTHSLDVSR 397
>GAU46782.1 hypothetical protein TSUD_351810 [Trifolium subterraneum]
Length = 1512
Score = 285 bits (729), Expect = 2e-79
Identities = 140/234 (59%), Positives = 175/234 (74%), Gaps = 4/234 (1%)
Frame = -3
Query: 962 LRTLSQEKNSKRMIGLAN*CEGLYSLVVDAK----NAFVSSTARGSDSIPAEALWHFRLG 795
L L QEK S +MIG EGLY L + N+ +S + IP +ALWHFRLG
Sbjct: 484 LDCLIQEKKSLKMIGSGELIEGLYYLTNKPQPVSANSSISINPSSNIHIPKQALWHFRLG 543
Query: 794 HMSNKRLNLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPI 615
H+S+ RL L+ S F FV +D ++VCD+CH ARHKKL Y L+++KA+ ELIHFDIWGP
Sbjct: 544 HLSHARLLLMQSSFPFVTIDEHAVCDICHLARHKKLTYKLSVNKASHCGELIHFDIWGPT 603
Query: 614 STSSVHGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNG 435
S S+HGH+YFLT +DD+SRFTW+ILLKSKA+V V F+TM+EK+++ ++ I TDNG
Sbjct: 604 SIHSIHGHRYFLTAIDDFSRFTWVILLKSKAEVSSLVIQFITMIEKQFNTIVRTIRTDNG 663
Query: 434 PEFLLPQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFF 273
PEFL+P+FY SKGI HQTSCVE+PQQNGRVERK QH+LNVGR+LLFQSK PK F
Sbjct: 664 PEFLIPEFYASKGINHQTSCVETPQQNGRVERKHQHLLNVGRSLLFQSKLPKKF 717
Score = 135 bits (341), Expect = 2e-29
Identities = 64/104 (61%), Positives = 81/104 (77%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
+SL+ PK FWSYAV +ATYI+NRV +PLLQNK PY LLY + PDL Q++VFG LC+
Sbjct: 705 RSLLFQSKLPKKFWSYAVSHATYIINRVCTPLLQNKSPYHLLYNKPPDLEQLKVFGSLCY 764
Query: 132 ASTLTAHRTKLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
ASTL RTKL+PRARK +FLG K+G+KG +L DI++ IF+SR
Sbjct: 765 ASTLQNQRTKLDPRARKCIFLGYKSGMKGVILYDIHNHNIFVSR 808
Score = 104 bits (259), Expect = 2e-19
Identities = 48/71 (67%), Positives = 55/71 (77%)
Frame = -3
Query: 1658 DPSQNPTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSIDPPS 1479
DPSQ P + Y+VH SDGP++V VTPVL SNYH WARSMRRALG+KNKF FVDGSI P
Sbjct: 19 DPSQIPGNIYYVHSSDGPSSVAVTPVLTHSNYHAWARSMRRALGAKNKFDFVDGSIPIPD 78
Query: 1478 IMDPTYTAWER 1446
DP++ AW R
Sbjct: 79 PFDPSFKAWSR 89
Score = 97.1 bits (240), Expect = 4e-17
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 12/158 (7%)
Frame = -2
Query: 1449 KAQILLMDPLPSINKVFSMVIHHERQ--NIQIVSD--DS--FVNAVDXXXXXXXXXXGYN 1288
++QILLMDPLP INKVFSMVI HERQ +Q V D DS VNA D G+N
Sbjct: 214 RSQILLMDPLPPINKVFSMVIQHERQFTPLQAVLDVEDSKVSVNASDSRRSQGRGRSGFN 273
Query: 1287 QNFDG------RNSNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYEQK 1126
++ N K+C++CGK H V+ CY+K+G+PP+Y + + +++A E +
Sbjct: 274 SQYNSGFNPQYNNKKKVCTYCGKENHVVENCYKKHGFPPHY-GRGSTANNANAGELMDND 332
Query: 1125 DESSVADKEPKANLPTFTTEQYEKLLALIQGNGQSQHA 1012
D S + +FT QYE+L+ L+Q + + A
Sbjct: 333 DARSTRGSDSF----SFTKAQYEQLVNLLQTSASTSSA 366
>GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterraneum]
Length = 1494
Score = 219 bits (557), Expect(2) = 2e-79
Identities = 114/229 (49%), Positives = 152/229 (66%), Gaps = 4/229 (1%)
Frame = -3
Query: 944 EKNSKRMIGLAN*CEGLYSLV-VDAKNAFVSSTARGSDSIPAEALWHFRLGHMSNKRLNL 768
+ + +RMIG GLY L ++ ++ S +IP ALWHFR GH S RL +
Sbjct: 476 QNSLQRMIGSGRMLNGLYYLEGTHSQPNLLTGKQCNSLAIPNNALWHFRFGHTSQNRLEI 535
Query: 767 VHSQFSFVYVDH-NSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGH 591
+ + + V+ + CDVCH A+ +KLPY + S+A+ EL+H DIWGP STS+ HGH
Sbjct: 536 LQKLYPTIEVNKVDFCCDVCHLAKQRKLPYVTSSSRASVILELLHMDIWGPFSTSTTHGH 595
Query: 590 KYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFL-LPQ 414
KYFLT++DD+SRFTWI+LLK K +V VQ+F+ E + K+K + +DNG EFL L +
Sbjct: 596 KYFLTIVDDFSRFTWIVLLKGKYEVASKVQEFINFAENHFCHKVKFLRSDNGQEFLSLSK 655
Query: 413 FYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRP-KFFG 270
FY SKGI HQTSCV +PQQNGRVERK Q ILN+ RAL+ QS P K++G
Sbjct: 656 FYISKGIQHQTSCVYTPQQNGRVERKHQCILNIARALMTQSHLPAKYWG 704
Score = 108 bits (269), Expect(2) = 2e-79
Identities = 49/95 (51%), Positives = 70/95 (73%)
Frame = -2
Query: 285 PKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCFASTLTAHRT 106
P +W YAVL + +I+NRVPS L+ + P+ LYG+ P+L+ ++VFG LCF ST R+
Sbjct: 699 PAKYWGYAVLQSVFIMNRVPSNALKGQIPFVALYGKLPELSDLKVFGSLCFVSTHDNQRS 758
Query: 105 KLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
KL+PRARK V+LG K GVKG+V LD+++ +I +SR
Sbjct: 759 KLDPRARKCVYLGIKPGVKGYVALDLHNYEIIVSR 793
Score = 82.4 bits (202), Expect = 2e-12
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Frame = -2
Query: 1461 HSLGKAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDSFVNAVDXXXXXXXXXXGYNQN 1282
+++ ++QILLM+P P +N VF +VI HE N ++DD N
Sbjct: 209 YAMVRSQILLMEPFPVLNAVFGLVIQHESINGLDITDDQLDPTASAINFARKSYGKANST 268
Query: 1281 FDGRNSNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYEQKDESSVADK 1102
S K C++C KT H VD C+RK+G+PP Y K+ +V S N+ + + D
Sbjct: 269 ---SQSQKKCTYCHKTNHVVDNCFRKHGFPPGYRFKDGTVVGSK-NQGQSSANCVNADDN 324
Query: 1101 EPKANLP---TFTTEQYEKLLALIQ-----GNGQSQ 1018
++++ TF+ E Y+ L+AL++ G G SQ
Sbjct: 325 MEQSSVDTRMTFSAEDYQALMALLKNSKSAGEGSSQ 360
Score = 82.0 bits (201), Expect = 2e-12
Identities = 37/73 (50%), Positives = 48/73 (65%)
Frame = -3
Query: 1664 VTDPSQNPTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSIDP 1485
+TDPSQNP Y+VHP++ V+P+L+G NYH W+RSM +A+ KNK RF+DGS
Sbjct: 20 LTDPSQNP---YYVHPNESATAALVSPLLDGKNYHAWSRSMMKAVIMKNKLRFLDGSCPM 76
Query: 1484 PSIMDPTYTAWER 1446
P PTY W R
Sbjct: 77 PDQFAPTYEPWIR 89
>KYP53203.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 633
Score = 209 bits (533), Expect(2) = 2e-79
Identities = 102/223 (45%), Positives = 153/223 (68%), Gaps = 7/223 (3%)
Frame = -3
Query: 926 MIGLAN*CEGLYSLVVDAKN------AFVSSTARGSDSIP-AEALWHFRLGHMSNKRLNL 768
MIGLAN +GL+ +V+ K+ + + SDS + L H+RLGH+SN + L
Sbjct: 1 MIGLANLKDGLFVIVLAEKHQPQGDESSIKYCCSSSDSTTNSNILCHYRLGHVSNFQFKL 60
Query: 767 VHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHK 588
+ +F F+ S CD+CH R +KLPY L+ S + + ++L+H DIW P + S++GHK
Sbjct: 61 LTLKFPFIKYSEVSPCDICHSVRQRKLPYKLSESHSNEIFDLLHADIWEPYAIPSLYGHK 120
Query: 587 YFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFY 408
YFLT++D++SR TW+IL+K+K++ + H++ F++ VE ++ K+K + DNG EF + +F+
Sbjct: 121 YFLTLVDEFSRHTWVILMKTKSETREHIKRFISYVETQFQTKLKTLRGDNGVEFAMDEFF 180
Query: 407 KSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPK 279
SKGI+H+TSCVE+PQ+NG VERK QHILNV RAL FQ+ PK
Sbjct: 181 SSKGILHKTSCVETPQKNGVVERKNQHILNVARALNFQANLPK 223
Score = 117 bits (292), Expect(2) = 2e-79
Identities = 49/95 (51%), Positives = 72/95 (75%)
Frame = -2
Query: 285 PKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCFASTLTAHRT 106
PK W++A+ + +++N +P+PLL+N+ PY LLY + P ++VFGCL +ASTL AHRT
Sbjct: 222 PKKIWNFAIQHVIHLINWLPTPLLENRTPYELLYSKPPLFMHLKVFGCLAYASTLEAHRT 281
Query: 105 KLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
K RARKSVF+G K G+KG++L D+ S+++FISR
Sbjct: 282 KFNSRARKSVFIGYKEGIKGYILYDLQSKEVFISR 316
>GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterraneum]
Length = 1469
Score = 284 bits (727), Expect = 3e-79
Identities = 131/226 (57%), Positives = 175/226 (77%), Gaps = 1/226 (0%)
Frame = -3
Query: 947 QEKNSKRMIGLAN*CEGLYSLVVDAKNAFVSST-ARGSDSIPAEALWHFRLGHMSNKRLN 771
Q++ +KRMIG A+ EGLY L + +K S +IP +ALWHFRLGH SN +++
Sbjct: 455 QDQLTKRMIGFADLIEGLYYLTLTSKEVHAHSIDGTQHTNIPDQALWHFRLGHTSNTKMS 514
Query: 770 LVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGH 591
L+ S F F+ VD+ VCD+CH A+HKKL Y ++++KAT PYELIHFDIWGPI++ S+H H
Sbjct: 515 LLQSVFPFITVDNKGVCDICHLAKHKKLYYKVSMNKATVPYELIHFDIWGPIASKSIHNH 574
Query: 590 KYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQF 411
YFLT +DDYSRFTW+ L+K K++ + HV +F+ ++E ++++K+KI+ T NG EFL+PQF
Sbjct: 575 AYFLTAVDDYSRFTWVTLMKHKSEARQHVINFIKLIETQHNSKVKIVRTYNGVEFLMPQF 634
Query: 410 YKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFF 273
Y SKGIVHQTSCVE+P+QNGRVERK QH+LNVGRALLFQ+ PK F
Sbjct: 635 YASKGIVHQTSCVETPEQNGRVERKHQHLLNVGRALLFQAHLPKMF 680
Score = 131 bits (330), Expect = 5e-28
Identities = 61/104 (58%), Positives = 79/104 (75%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L+ PK+FWSYAV +ATYI+NRVPS +L NK PY LL+ PD+ ++VFG L +
Sbjct: 668 RALLFQAHLPKMFWSYAVQHATYIINRVPSVVLSNKSPYELLHNVLPDIKDLKVFGSLAY 727
Query: 132 ASTLTAHRTKLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
ASTL +HRTKL PRARK +FLG K GVKG +L D++S+ IFISR
Sbjct: 728 ASTLQSHRTKLTPRARKCIFLGYKQGVKGTILYDLHSKDIFISR 771
Score = 92.8 bits (229), Expect = 9e-16
Identities = 43/72 (59%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Frame = -3
Query: 1658 DPSQNPTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSIDPP- 1482
DP+ +P+S Y+VH SDGP++V V+P L GSNYH W+RSMRRALG K K FVDGSI P
Sbjct: 9 DPASDPSSPYYVHSSDGPSSVKVSPPLTGSNYHSWSRSMRRALGGKLKLEFVDGSIPVPI 68
Query: 1481 SIMDPTYTAWER 1446
DP++ AW R
Sbjct: 69 DQFDPSFRAWNR 80
Score = 86.7 bits (213), Expect = 8e-14
Identities = 59/146 (40%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Frame = -2
Query: 1449 KAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDS--FVNAVDXXXXXXXXXXGYNQNFD 1276
K+QILLMDPLP +NKVFS+V+ HERQ SDDS +NA ++
Sbjct: 204 KSQILLMDPLPPMNKVFSLVLQHERQGKFSPSDDSNVLLNAAK------------SKGSF 251
Query: 1275 GRNSNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYEQKDESSVADKEP 1096
+ ++C+FCGK H V+ C++KYG PP +F+KN S A+S+ E DE S A
Sbjct: 252 PSKTTRVCTFCGKDNHIVENCFKKYGTPP-HFRKN-SQANSAEIEG--GNDEQSTA---- 303
Query: 1095 KANLPTFTTEQYEKLLALIQGNGQSQ 1018
AN T +Q +L++L+Q + SQ
Sbjct: 304 -ANSNFITQDQALQLISLLQSSFPSQ 328
>GAU31769.1 hypothetical protein TSUD_22150 [Trifolium subterraneum]
Length = 1372
Score = 277 bits (709), Expect = 6e-77
Identities = 128/226 (56%), Positives = 174/226 (76%), Gaps = 1/226 (0%)
Frame = -3
Query: 947 QEKNSKRMIGLAN*CEGLYSLVVDAKNAFVSST-ARGSDSIPAEALWHFRLGHMSNKRLN 771
Q++ +KRMIG A+ EGLY L + ++ + +IP +ALW FRLGH SN +++
Sbjct: 414 QDQLTKRMIGSADLIEGLYYLTLTSEEVHAHNIDGTQHTNIPDQALWLFRLGHTSNTKMS 473
Query: 770 LVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGH 591
L+ S F F+ VD+ VCD+CH A+HKKL Y ++++KA PYELIHFDIWGPI++ S+H H
Sbjct: 474 LLQSVFPFIAVDNKGVCDICHLAKHKKLYYKVSMNKAYVPYELIHFDIWGPIASKSIHNH 533
Query: 590 KYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQF 411
YFLTV+DDYSRFTW+ L+K K + + HV +F+ ++E ++++K+KI+ TDNG EFL+ QF
Sbjct: 534 AYFLTVVDDYSRFTWVTLMKHKTEARQHVINFIKLIETQHNSKVKIVRTDNGVEFLITQF 593
Query: 410 YKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFF 273
Y SKGI+HQTSCVE+P+QNGRVERK QH+LNVGRALLFQ+ PKFF
Sbjct: 594 YASKGIIHQTSCVETPEQNGRVERKHQHLLNVGRALLFQAHLPKFF 639
Score = 124 bits (311), Expect = 1e-25
Identities = 57/104 (54%), Positives = 77/104 (74%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L+ PK FWSY V +ATYI+NRVP +L NK PY LL+ P++ ++VFG L +
Sbjct: 627 RALLFQAHLPKFFWSYDVQHATYIINRVPFVVLSNKSPYELLHNVLPNIKDLKVFGSLAY 686
Query: 132 ASTLTAHRTKLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
ASTL +HRTKL PRARK +FLG K GVKG +L D+++++IFISR
Sbjct: 687 ASTLQSHRTKLAPRARKCIFLGYKQGVKGTILYDLHNKEIFISR 730
Score = 84.3 bits (207), Expect = 4e-13
Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
Frame = -2
Query: 1449 KAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDS--FVNAVDXXXXXXXXXXGYNQNFD 1276
K+QILLMDPLP +NKVFS+V+ HERQ SDDS +NA ++
Sbjct: 163 KSQILLMDPLPPMNKVFSLVLQHERQGKFSPSDDSNVLLNAAK------------SKGSF 210
Query: 1275 GRNSNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYEQKDESSVADKEP 1096
+ ++C+ CGK H V+ C++KYG PP +F+KN S A+S+ E DE S A
Sbjct: 211 PSKTTRVCTLCGKDNHIVENCFKKYGTPP-HFRKN-SQANSAEIEG--GNDEQSTA---- 262
Query: 1095 KANLPTFTTEQYEKLLALIQGNGQSQ 1018
AN T +Q +L++L+Q + SQ
Sbjct: 263 -ANSNFITQDQALQLISLLQNSFPSQ 287
Score = 68.2 bits (165), Expect = 4e-08
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Frame = -3
Query: 1658 DPSQNPTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKN---KFRFVDGSID 1488
DP+ +P+S Y+VH SDGP++V V+P L GSNYH W+RSMRRAL S + F++ +ID
Sbjct: 9 DPASDPSSPYYVHSSDGPSSVKVSPPLTGSNYHSWSRSMRRALVSDSIAQSIVFMENAID 68
>AJY78067.1 putative polyprotein [Glycine max]
Length = 886
Score = 271 bits (694), Expect = 1e-76
Identities = 130/232 (56%), Positives = 171/232 (73%), Gaps = 7/232 (3%)
Frame = -3
Query: 947 QEKNSKRMIGLAN*CEGLYSLVVDAK-----NAFVSSTARGSDS--IPAEALWHFRLGHM 789
QE+ S +MIGL +GLY L K N +SS +++ IP A+WHFRLGH+
Sbjct: 480 QEQKSLKMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHFRLGHL 539
Query: 788 SNKRLNLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPIST 609
S+ R+ L+HSQF F+ D +SVCD+CH+A+H+KLP+ + KA K ++LIHFDIWGPIS
Sbjct: 540 SSSRIALLHSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPISI 599
Query: 608 SSVHGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPE 429
SVH H YFLT +DD+SR+TWI L+K+K++ +LHVQ+F+ ++ +Y+ +K I TDNGPE
Sbjct: 600 KSVHNHAYFLTAVDDHSRYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSIRTDNGPE 659
Query: 428 FLLPQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFF 273
FL+P FY SKGI+HQT CV+SPQQNGRVERK Q ILN+GRALL QS PK F
Sbjct: 660 FLMPDFYASKGILHQTLCVDSPQQNGRVERKHQQILNIGRALLVQSNLPKSF 711
Score = 130 bits (327), Expect = 7e-28
Identities = 63/104 (60%), Positives = 79/104 (75%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L++ PK FW YAV +A YI+NRVP+P LQNK PYTLLY PD + ++VFG L F
Sbjct: 699 RALLVQSNLPKSFWCYAVSHAVYIMNRVPAPNLQNKSPYTLLYNTAPDFDTLKVFGSLVF 758
Query: 132 ASTLTAHRTKLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
ASTL +HRTKL+ RARK VFLG K+GVKG VLLD+ + IF+SR
Sbjct: 759 ASTLQSHRTKLDLRARKCVFLGYKSGVKGVVLLDLLNNSIFLSR 802
Score = 102 bits (253), Expect = 9e-19
Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = -3
Query: 1658 DPSQNPTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSID-PP 1482
DPS +PTS +FVHPSDGP++V VTP+L+GSNYH WARS+RRALG+K KF F+DG+I P
Sbjct: 12 DPSTDPTSPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRALGAKLKFEFLDGTIPMPV 71
Query: 1481 SIMDPTYTAWER 1446
DP++ AW R
Sbjct: 72 DAFDPSFRAWNR 83
Score = 87.4 bits (215), Expect = 3e-14
Identities = 55/144 (38%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
Frame = -2
Query: 1449 KAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDS--FVNAVDXXXXXXXXXXGYNQNFD 1276
K+QILL++PLPSI K+FSMVI ERQN DDS VNA + +
Sbjct: 207 KSQILLIEPLPSITKIFSMVIQFERQNCVPNLDDSKALVNA---------STSKSQGSAN 257
Query: 1275 GRN---SNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYEQKDESSVAD 1105
GR+ S + C++C KT H V+ C++K+G PP+ + + A SA + E+ + S+ +
Sbjct: 258 GRSNSGSKRYCTYCHKTNHFVENCFQKHGVPPHMMKNHSGSAHHSAVDGGERVESSTASQ 317
Query: 1104 KEPKANL-PTFTTEQYEKLLALIQ 1036
+ P+ T EQ +KLL LIQ
Sbjct: 318 NTTSVTMTPSLTQEQLDKLLQLIQ 341
>KHN05285.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 274 bits (700), Expect = 8e-76
Identities = 131/232 (56%), Positives = 172/232 (74%), Gaps = 7/232 (3%)
Frame = -3
Query: 947 QEKNSKRMIGLAN*CEGLYSLVVDAK-----NAFVSSTARGSDS--IPAEALWHFRLGHM 789
QE+ S +MIGL +GLY L K N +SS +++ IP A+WHFRLGH+
Sbjct: 384 QEQKSLKMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHFRLGHL 443
Query: 788 SNKRLNLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPIST 609
S+ R+ L+HSQF F+ D +SVCD+CH+A+H+KLP+ + KA K ++LIHFDIWGPIS
Sbjct: 444 SSSRIALLHSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPISI 503
Query: 608 SSVHGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPE 429
SVH H YFLT +DD+SR+TWI L+K+K++ +LHVQ+F+ ++ +Y+ +K I TDNGPE
Sbjct: 504 KSVHNHAYFLTAVDDHSRYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSIRTDNGPE 563
Query: 428 FLLPQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFF 273
FL+P FY SKGI+HQTSCV+SPQQNGRVERK Q ILN+GRALL QS PK F
Sbjct: 564 FLMPDFYASKGILHQTSCVDSPQQNGRVERKHQQILNIGRALLVQSNLPKSF 615
Score = 130 bits (327), Expect = 1e-27
Identities = 63/104 (60%), Positives = 79/104 (75%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L++ PK FW YAV +A YI+NRVP+P LQNK PYTLLY PD + ++VFG L F
Sbjct: 603 RALLVQSNLPKSFWCYAVSHAVYIMNRVPAPNLQNKSPYTLLYNTAPDFDTLKVFGSLVF 662
Query: 132 ASTLTAHRTKLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
ASTL +HRTKL+ RARK VFLG K+GVKG VLLD+ + IF+SR
Sbjct: 663 ASTLQSHRTKLDLRARKCVFLGYKSGVKGVVLLDLLNNSIFLSR 706
Score = 70.9 bits (172), Expect = 6e-09
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Frame = -2
Query: 1449 KAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDS--FVNAVDXXXXXXXXXXGYNQNFD 1276
K+QILL++PLPSI K+FSMVI ERQN DDS VNA + +
Sbjct: 170 KSQILLIEPLPSITKIFSMVIQFERQNCVPNLDDSKALVNA---------STSKSQGSAN 220
Query: 1275 GRN---SNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYE 1132
GR+ S + C++C KT H V+ C++K+G PP+ + + A SA + E
Sbjct: 221 GRSNSGSKRYCTYCHKTNHFVENCFQKHGVPPHMMKNHSGSAHHSAVDGGE 271
Score = 62.0 bits (149), Expect = 3e-06
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = -3
Query: 1580 LNGSNYHVWARSMRRALGSKNKFRFVDGSID-PPSIMDPTYTAWER 1446
L+GSNYH WARS+RRALG+K KF F+DG+I P DP++ AW R
Sbjct: 1 LDGSNYHSWARSLRRALGAKLKFEFLDGTIPMPVDAFDPSFRAWNR 46
>KYP36109.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1115
Score = 269 bits (687), Expect = 1e-74
Identities = 125/225 (55%), Positives = 168/225 (74%)
Frame = -3
Query: 947 QEKNSKRMIGLAN*CEGLYSLVVDAKNAFVSSTARGSDSIPAEALWHFRLGHMSNKRLNL 768
Q+ N+ +MIG AN EGL+ L + + ++ A + I LWHFRLGH+S+ RLN+
Sbjct: 152 QDMNTLKMIGSANLKEGLFHLDIGKERRSSTNNATATP-INNSNLWHFRLGHLSSNRLNV 210
Query: 767 VHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHK 588
++ QF F+ N VCDVCH+A+ KKL Y + S+ +K ++LIH DIWGP S +S+HGHK
Sbjct: 211 LNQQFPFISKHSNEVCDVCHFAKQKKLSYSPSSSRVSKIFDLIHMDIWGPFSKASIHGHK 270
Query: 587 YFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFY 408
YFLT+LDD+SR+TW++LLKSK++V+ HV +F+ +VE +Y+ K+K I +DNGPEF L F+
Sbjct: 271 YFLTILDDFSRYTWVVLLKSKSEVKTHVHNFINLVENQYETKVKCIRSDNGPEFFLRDFF 330
Query: 407 KSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFF 273
SKGI+HQTSCV +PQQNGRVERK QHILNV RAL+FQSK P F
Sbjct: 331 NSKGIIHQTSCVYTPQQNGRVERKHQHILNVARALMFQSKLPSNF 375
Score = 115 bits (289), Expect = 4e-23
Identities = 52/104 (50%), Positives = 76/104 (73%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L+ P FWSYA+ +A +++NRVPSP++ +K P+ LL PD + ++VFGCLC+
Sbjct: 363 RALMFQSKLPSNFWSYAIKHAIFLINRVPSPIISHKTPFELLNKIPPDFSMLKVFGCLCY 422
Query: 132 ASTLTAHRTKLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
AST R K EPR+RK +F+G +NG KGFV+LDIN+R+I +SR
Sbjct: 423 ASTHN-QRHKFEPRSRKGIFMGFQNGTKGFVILDINTREILVSR 465
>KYP70579.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 288
Score = 241 bits (614), Expect = 3e-71
Identities = 111/237 (46%), Positives = 172/237 (72%), Gaps = 7/237 (2%)
Frame = -3
Query: 926 MIGLAN*CEGLYSLVVDAKN-----AFVSSTARGSDSIPAEALWHFRLGHMSNKRLNLVH 762
MIG A +GLY L+ + + +++++ + + ALWHFRLGH+S RLN++
Sbjct: 1 MIGFAEEVDGLYYLIKTCQKPTTNTSQINTSSTHNSTYSPNALWHFRLGHISESRLNMLS 60
Query: 761 SQFSFVY-VDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKY 585
+SF+ +H VCDVCH+A+ +KLP+ ++ SK ++P+EL+H D+WGP S +V+ +Y
Sbjct: 61 ELYSFINNCNHKHVCDVCHFAKQRKLPFSVSNSKTSRPFELLHLDLWGPYSIQTVNHQRY 120
Query: 584 FLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYK 405
FLT++DDYSR+TW+ILLK+K++ + ++ F +V++++ +KIK I TDNGPEF L FY+
Sbjct: 121 FLTIVDDYSRYTWVILLKNKSQTEQSLRHFSKLVDRQFHSKIKTIRTDNGPEFFLHSFYQ 180
Query: 404 SKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPK-FFGLMLSYMLPILS 237
+GI+HQTSCVE+PQQNGRVER+ Q ILNV RALLFQ PK F+G +++++ +++
Sbjct: 181 EEGIIHQTSCVETPQQNGRVERRHQTILNVARALLFQGNLPKSFWGFAVTHVVHLIN 237
Score = 85.5 bits (210), Expect = 1e-14
Identities = 34/77 (44%), Positives = 54/77 (70%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L+ PK FW +AV + +++N+VP+ +L +K PY +LYG+ PDL +RVFGCLC+
Sbjct: 212 RALLFQGNLPKSFWGFAVTHVVHLINKVPTQVLGSKSPYQILYGELPDLKHLRVFGCLCY 271
Query: 132 ASTLTAHRTKLEPRARK 82
S+++ HR K + RA K
Sbjct: 272 ISSISLHRKKFDSRAHK 288
>ABE88096.1 Integrase, catalytic region [Medicago truncatula]
Length = 604
Score = 187 bits (474), Expect(2) = 6e-71
Identities = 82/179 (45%), Positives = 125/179 (69%)
Frame = -3
Query: 890 SLVVDAKNAFVSSTARGSDSIPAEALWHFRLGHMSNKRLNLVHSQFSFVYVDHNSVCDVC 711
SL++ A ++T ALWHFRLGH+SN+RL+ +H + ++VD+ +CD+C
Sbjct: 270 SLIIPAPPITSANTNHIISEPSYAALWHFRLGHLSNQRLSQMHHLYPDIHVDNKFICDIC 329
Query: 710 HYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLTVLDDYSRFTWIILLK 531
H+A+ +KLPY + S A+ +EL++ DIWGP++ S+HG +YFLT++DD+SRF W IL K
Sbjct: 330 HFAKQRKLPYNSSTSIASSNFELLYLDIWGPLAKVSIHGQRYFLTIVDDHSRFLWTILFK 389
Query: 530 SKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKGIVHQTSCVESPQQN 354
+K++V H+Q F+ +++ ++ KII +DNG FLL FY S+GI+HQ SCVE+PQ N
Sbjct: 390 NKSEVPSHIQHFIYLIQNKHKVTPKIIRSDNGHVFLLSAFYASQGIIHQRSCVETPQHN 448
Score = 111 bits (278), Expect(2) = 6e-71
Identities = 49/82 (59%), Positives = 67/82 (81%)
Frame = -2
Query: 246 YIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCFASTLTAHRTKLEPRARKSVFLG 67
+++NRVP+ +L+NK PY +LY PD+N +VFGCLC+ASTL +HRTKL+ RARKSVFLG
Sbjct: 450 FLINRVPTLVLENKSPYQVLYKTLPDINSFKVFGCLCYASTLQSHRTKLQSRARKSVFLG 509
Query: 66 QKNGVKGFVLLDINSRQIFISR 1
K+G KG L D+N+++IF+SR
Sbjct: 510 YKSGYKGSFLYDLNTKEIFMSR 531
Score = 62.4 bits (150), Expect = 2e-06
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Frame = -2
Query: 1449 KAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDSF------VNAVDXXXXXXXXXXGYN 1288
K Q+++ + SINK++S+VI E N + + S VNA D
Sbjct: 136 KTQVVIQE---SINKIYSLVIQEESNNSVVTASSSIEDSNILVNASDARKPFGRGKLNSG 192
Query: 1287 QNFDGRNSNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANE-SYEQKDESSV 1111
+ +N++K CSFC KT HT++ CY+K+G+P N + S S N + E ES
Sbjct: 193 SH-PPKNNSKYCSFCHKTNHTLEFCYQKHGFP------NANKGSGSTNAVNSEGVPESQG 245
Query: 1110 ADKEPKANLPTFTTEQYEKLLALIQ 1036
+ + L T EQY L++L+Q
Sbjct: 246 SSAISQIGL---TQEQYVHLVSLLQ 267
>XP_012435315.1 PREDICTED: uncharacterized protein LOC105761928 [Gossypium raimondii]
Length = 601
Score = 210 bits (534), Expect(2) = 3e-69
Identities = 106/222 (47%), Positives = 144/222 (64%), Gaps = 1/222 (0%)
Frame = -3
Query: 935 SKRMIGLAN*CEGLYSLVVDAKNAFVSST-ARGSDSIPAEALWHFRLGHMSNKRLNLVHS 759
S +M+G A GLY L + ST S+ +LWH RLGH+S+ RL ++S
Sbjct: 353 SMKMMGTAKVFNGLYVLELSVLPTPSPSTKVFAVMSVSPASLWHHRLGHLSDSRLKSLYS 412
Query: 758 QFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFL 579
S N C CH A+ KKL + L+ S + ++LIH DIWGP S+ GH+YFL
Sbjct: 413 NISSSPFVANLPCKTCHLAKQKKLVFPLSQSVSKALFDLIHVDIWGPNGIVSIIGHRYFL 472
Query: 578 TVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSK 399
T++DD+S FTWI+LLKSK++ + H+ F ++VE ++ KIK+I TDNGPEF +P FY S
Sbjct: 473 TIVDDFSSFTWIVLLKSKSEARFHLLSFRSLVETQFPLKIKVIRTDNGPEFTIPSFYASN 532
Query: 398 GIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFF 273
I+HQTSCV++PQ+NG ++RK QHILNV RALLF + PK F
Sbjct: 533 RILHQTSCVKTPQENGLIKRKHQHILNVSRALLFHAHLPKIF 574
Score = 82.8 bits (203), Expect(2) = 3e-69
Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Frame = -2
Query: 1449 KAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDSFVNAVDXXXXXXXXXXGYNQNFDGR 1270
++QI+L+DPLPS+NK FSMV+ ERQ + S N V QN
Sbjct: 198 RSQIMLIDPLPSLNKAFSMVMQQERQLTSVSSQVLTSNIVCHPSSARKP-----QNKSSA 252
Query: 1269 NSNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYEQKDESSVADKEPKA 1090
+S++ C++ G + HT+ CY+K+GYPP Y K P+ + A + S + +
Sbjct: 253 DSHQ-CTYYGGSRHTISTCYKKHGYPPGYKSKRPTSRVNLAVDKKVTPASESSSSVSTDS 311
Query: 1089 NLPTFTTEQYEKLLALIQGNGQSQH--AMLTTQGSSSTQ 979
N+ T+ Q ++LLAL+ + QS H + + + S ST+
Sbjct: 312 NV-ALTSMQIQQLLALLPSSSQSSHITSQVLVETSESTE 349
Score = 80.1 bits (196), Expect = 5e-12
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = -3
Query: 1658 DPSQNPTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSIDPPS 1479
D + +S YF+HP++ P V V+P+L NYH WAR+M AL SKNK +FVDG+I P+
Sbjct: 4 DDPADISSPYFLHPNENPALVLVSPMLTSLNYHSWARAMCMALLSKNKLKFVDGTIQAPA 63
Query: 1478 IMDPTYTAWER 1446
DP + AWER
Sbjct: 64 ATDPLFPAWER 74
>KYP62795.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 301
Score = 234 bits (598), Expect = 1e-68
Identities = 113/240 (47%), Positives = 170/240 (70%), Gaps = 7/240 (2%)
Frame = -3
Query: 923 IGLAN*CEGLYSLV-VDAKNAFVSSTA--RGSDSIPAEALWHFRLGHMSNKRLNLVHSQF 753
IG + +GLY L+ V + ++ST + IP + LWHFRLGH+S++R++++ Q+
Sbjct: 3 IGSVDVRDGLYQLIPVHLQPHSINSTIIHPKCNVIPID-LWHFRLGHLSSERMHIMQQQY 61
Query: 752 SFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFLTV 573
S + + N VC+ CHYA+ +KLP+ L+ S AT+P+ LIH DIWGP ST S++GH+YFLT+
Sbjct: 62 SCLNNNKNFVCNTCHYAKQRKLPFPLSNSHATQPFALIHMDIWGPYSTLSMNGHRYFLTI 121
Query: 572 LDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSKGI 393
+DD++R+TW+ L+ +K++ + H+ +F+ +VE ++D +KIICTDNG EF + + + KGI
Sbjct: 122 VDDHTRYTWVYLMCNKSETRTHITNFINLVENQFDTHVKIICTDNGNEFFMHELFHLKGI 181
Query: 392 VHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRPKFFG----LMLSYMLPILSTEFL 225
+HQTSC+E+PQQNG VERK QH+LNV RALLF S P F L +Y++ + T FL
Sbjct: 182 IHQTSCIETPQQNGIVERKHQHLLNVTRALLFHSNLPDCFWSFALLHATYLINCIPTPFL 241
Score = 85.1 bits (209), Expect = 2e-14
Identities = 35/80 (43%), Positives = 56/80 (70%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L+ P FWS+A+L+ATY++N +P+P L+N P+ L+G D+ I+VFGCLC+
Sbjct: 209 RALLFHSNLPDCFWSFALLHATYLINCIPTPFLKNTSPFEKLHGVQCDIAMIKVFGCLCY 268
Query: 132 ASTLTAHRTKLEPRARKSVF 73
+T+T+ R KL+PRA +F
Sbjct: 269 ITTITSQRKKLDPRAHPCIF 288
>XP_004498431.2 PREDICTED: uncharacterized protein LOC101490285 [Cicer arietinum]
Length = 975
Score = 184 bits (467), Expect(2) = 2e-67
Identities = 90/176 (51%), Positives = 119/176 (67%), Gaps = 1/176 (0%)
Frame = -3
Query: 815 LWHFRLGHMSNKRLNLVHSQFSFV-YVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELI 639
+WH R GH SN L ++ F FV + +S CDVC A+HK+LP+ ++ A ++LI
Sbjct: 500 IWHHRFGHPSNDTLTHINKSFPFVKFPKRHSPCDVCFKAKHKRLPFPHSIIVADFCFDLI 559
Query: 638 HFDIWGPISTSSVHGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKI 459
H DIWG S S+ G KYFLTV+DD SRF WI L+K K++ V+ FV+MV+ ++ +
Sbjct: 560 HMDIWGAFSVPSIFGFKYFLTVVDDKSRFCWIYLMKLKSETSSLVKSFVSMVKTQFGKTV 619
Query: 458 KIICTDNGPEFLLPQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQS 291
K I DNG +F L FY+S GI+HQTSCVE+PQQNG VERK QHIL V R ++FQS
Sbjct: 620 KCIRFDNGTKFSLKDFYQSHGIIHQTSCVETPQQNGIVERKHQHILTVARVIMFQS 675
Score = 102 bits (254), Expect(2) = 2e-67
Identities = 40/92 (43%), Positives = 71/92 (77%)
Frame = -2
Query: 276 FWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCFASTLTAHRTKLE 97
FW+++++Y+ +++NR+PS L+ PY +LY + P+++++R+FGCLC+ STL ++R K +
Sbjct: 681 FWAHSIIYSVFLINRLPSKFLKFDSPYHVLYDRLPNISELRMFGCLCYTSTLKSNRKKFD 740
Query: 96 PRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
R+RK + LG K G KG VL D+++++IF+SR
Sbjct: 741 FRSRKCINLGHKPGTKGHVLFDLHNKEIFVSR 772
Score = 85.9 bits (211), Expect = 1e-13
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
Frame = -2
Query: 1461 HSLGKAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDSFVNAVDXXXXXXXXXXGYNQN 1282
+S ++Q++LMDPLPSINKVFSM++ ER + + A+
Sbjct: 192 YSAVRSQVMLMDPLPSINKVFSMLVQQERHLFPNPEESPTIAAISNHSGGLPKGR----- 246
Query: 1281 FDGRNSNKI-CSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYE-QKDESSVA 1108
GR + C+ C + GHT++VC++K+G+PP++ + + A A +S D+ S +
Sbjct: 247 --GRGRGSLYCTHCNRHGHTMEVCFQKHGFPPHFHKNGNNSAKMCAADSVNIDDDQKSQS 304
Query: 1107 DKEPKANLPT-FTTEQYEKLLALIQGNGQSQHAMLTTQ-GSSSTQH 976
EP ++L + FT EQ + LL+L+ + H + Q GS S H
Sbjct: 305 LDEPSSDLHSGFTPEQQKALLSLLHPSSSINHLVNPAQSGSFSFSH 350
Score = 67.8 bits (164), Expect = 5e-08
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = -3
Query: 1631 YFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSIDPPSIMDPTYTAW 1452
YF+HPSD P+ V+P L+ +NYH W+RSM AL SKNK FV G++ P+ +D W
Sbjct: 42 YFMHPSDNPSVALVSPPLSATNYHSWSRSMIVALRSKNKLGFVTGALPRPANIDRLSITW 101
Query: 1451 ER 1446
+R
Sbjct: 102 DR 103
>KYP68633.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1108
Score = 248 bits (633), Expect = 3e-67
Identities = 117/222 (52%), Positives = 162/222 (72%), Gaps = 2/222 (0%)
Frame = -3
Query: 947 QEKNSKRMIGLAN*CEGLYSLVVDA--KNAFVSSTARGSDSIPAEALWHFRLGHMSNKRL 774
Q+ S RMIGLA GLY L K A V + ++SIP +LWHFRLGH+S++RL
Sbjct: 447 QDMKSTRMIGLAKQVGGLYLLKAKTQEKMAEVQVSNITTESIPESSLWHFRLGHLSHERL 506
Query: 773 NLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHG 594
+ + ++++ ++VCD+CH A+ KKLPY ++ ++A++ EL+HF+IWGP +S+HG
Sbjct: 507 ETMSRENPIIFINKDAVCDICHLAKKKKLPYLMSKNRASEICELLHFNIWGPYQINSIHG 566
Query: 593 HKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQ 414
HKYFLT LDD +RF W+IL+KSK++V H+Q+ V M+E++++ KIKII TDNGPEF L +
Sbjct: 567 HKYFLTALDDCNRFLWVILMKSKSEVSTHLQNLVHMLERQFEKKIKIIRTDNGPEFTLTE 626
Query: 413 FYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSK 288
FY +GI+HQTSCVE P+QNGRVERK QHI NV R+LL K
Sbjct: 627 FYAKEGILHQTSCVECPEQNGRVERKHQHIFNVARSLLLPYK 668
Score = 123 bits (308), Expect = 2e-25
Identities = 78/189 (41%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Frame = -2
Query: 1506 CGWQY*SSFHHGPNLH-SLGKAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDSFVNAV 1330
C Q F +G N H ++ K+QILLMDPLPS+NKVFSM+I HERQ + ++ V A
Sbjct: 180 CNCQAQFQFLNGLNDHFNVVKSQILLMDPLPSLNKVFSMIIQHERQGNPSLGEEIKVFAG 239
Query: 1329 DXXXXXXXXXXGYNQNFDGRNSNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSS 1150
N ++ GR S K+CS+CGK+GHTVDVCY+K+GYP N+ KN S +
Sbjct: 240 TTDNRKSFGIGKGNNSW-GRGSGKVCSYCGKSGHTVDVCYKKHGYPLNFGSKNNSTVQNI 298
Query: 1149 ANESYEQKDESSVADKEPKAN-LPTFTTEQYEKLLALIQGNGQSQHAMLTTQGSSSTQHR 973
E E+ ++ S KE +N T EQY LLALIQ Q + + +S Q
Sbjct: 299 IQEETEENEDQS--RKEDSSNSQQVITQEQYRNLLALIQ-----QSNLQASSSHTSNQVS 351
Query: 972 HTPAEDFKS 946
P F S
Sbjct: 352 TDPPTQFHS 360
Score = 107 bits (266), Expect = 3e-20
Identities = 46/73 (63%), Positives = 59/73 (80%)
Frame = -3
Query: 1664 VTDPSQNPTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSIDP 1485
+ DPSQ+PTSHY+VHPS+ P++V+VTP L NYH WAR MRRAL +KNK+RFVDG++
Sbjct: 19 ILDPSQDPTSHYYVHPSEVPSSVSVTPQLTAKNYHSWARMMRRALIAKNKYRFVDGTLPI 78
Query: 1484 PSIMDPTYTAWER 1446
P++ DP Y AWER
Sbjct: 79 PAVNDPHYFAWER 91
>ABD32334.2 Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 772
Score = 243 bits (619), Expect = 7e-67
Identities = 122/243 (50%), Positives = 164/243 (67%), Gaps = 18/243 (7%)
Frame = -3
Query: 947 QEKNSKRMIGLAN*CEGLYSLVVDAKNA----FVSSTARGSD--------------SIPA 822
Q+ +++MIGL N C+GLY L A + F+SS ++ SIP+
Sbjct: 478 QDVKTQKMIGLGNLCDGLYRLHPFAPASPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPS 537
Query: 821 EALWHFRLGHMSNKRLNLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYEL 642
A+WHFRLGH+SN+RL+++HS +S + +D+ + S A+ +EL
Sbjct: 538 NAIWHFRLGHLSNQRLSMMHSLYSSITIDNKAY------------------SIASSKFEL 579
Query: 641 IHFDIWGPISTSSVHGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAK 462
+HFDIWGP+S +SVHGHKYFLT++DD+SRF W+ILLK+K++V HV++FV ++ Y
Sbjct: 580 LHFDIWGPLSVTSVHGHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQIT 639
Query: 461 IKIICTDNGPEFLLPQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRP 282
K I +DNGPEFL+P+FY SKGI+HQ SCVE+PQQNGRVERK QHILNV RALLFQSK P
Sbjct: 640 PKYIRSDNGPEFLIPEFYASKGIIHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLP 699
Query: 281 KFF 273
FF
Sbjct: 700 NFF 702
Score = 103 bits (258), Expect = 2e-19
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L+ P FWSYAV++A +++N+VP+PL + K PY LLY PD+N +VFGCLCF
Sbjct: 690 RALLFQSKLPNFFWSYAVIHAVFLINKVPTPLFKQKSPYQLLYDSLPDINSFKVFGCLCF 749
Query: 132 ASTLTAHRTKLEPRARKSVF 73
ASTL A R+KL+ RARKS+F
Sbjct: 750 ASTLLAQRSKLQSRARKSIF 769
Score = 91.7 bits (226), Expect = 1e-15
Identities = 42/67 (62%), Positives = 51/67 (76%)
Frame = -3
Query: 1646 NPTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSIDPPSIMDP 1467
N S Y+VHPS+GPN+VTVTP+L G NY W RSM+RALG+KNKF F+DGS+ P + D
Sbjct: 14 NIDSIYYVHPSEGPNSVTVTPLLTGPNYLAWNRSMKRALGTKNKFVFIDGSVPIPPMDDL 73
Query: 1466 TYTAWER 1446
TAWER
Sbjct: 74 NRTAWER 80
Score = 81.3 bits (199), Expect = 3e-12
Identities = 62/181 (34%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Frame = -2
Query: 1458 SLGKAQILLMDPLPSINKVFSMVIHHERQNIQIVS----DDS--FVNAVDXXXXXXXXXX 1297
S+ K Q+LL+DPLPSINKV+SMVI E I S +DS VNA D
Sbjct: 201 SVVKTQVLLIDPLPSINKVYSMVIQEESNIIPPTSLASNEDSSILVNASDARKPFLRGKS 260
Query: 1296 GYNQNFDGRNSNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYEQKDES 1117
+ +N+++ C+FC + HTV+ CY K+ +P N ASS+A S D
Sbjct: 261 --SGTSQSKNNSRYCTFCRRNNHTVEYCYLKHDFP----NANKPTASSNAVTSEHAVDSH 314
Query: 1116 SVADKEPKANLPTFTTEQYEKLLALIQGNGQSQHAMLTTQGSSSTQHRHT---PAEDFKS 946
+ ++ ++ T EQY L++L+Q + A T +ST H T + DF S
Sbjct: 315 TSSEGTSSSSQTGLTQEQYVHLVSLLQQSSLVPSA--TPPNPASTNHVATSFPSSIDFTS 372
Query: 945 G 943
G
Sbjct: 373 G 373
>GAU15708.1 hypothetical protein TSUD_307180 [Trifolium subterraneum]
Length = 1433
Score = 248 bits (633), Expect = 8e-67
Identities = 124/242 (51%), Positives = 167/242 (69%), Gaps = 8/242 (3%)
Frame = -3
Query: 938 NSKRMIGLAN*CEGLYSLVVDAKNAF-------VSSTARGSDSIPAEALWHFRLGHMSNK 780
+ +RMIG GLY L + NA V+ T SIP ALWHFR GH SN
Sbjct: 454 SQQRMIGSGKLLNGLYYL--EGTNASTHSLVKPVTGTVCTVFSIPQSALWHFRFGHASNS 511
Query: 779 RLNLVHSQFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSV 600
RL ++H + + ++ + VCDVCH A+ KKL Y L+ SK+TK +EL+H DIWGP ST+++
Sbjct: 512 RLEIMHKSYPSISINKDCVCDVCHLAKQKKLSYSLSTSKSTKCFELLHMDIWGPYSTATL 571
Query: 599 HGHKYFLTVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLL 420
HGHKYFLT++DD+SRFTW+ILLK K +V HVQ F+ +VE ++++ +KI+ +DNGPEF L
Sbjct: 572 HGHKYFLTIVDDFSRFTWVILLKGKNEVASHVQHFIHLVENQFESTVKIVRSDNGPEFSL 631
Query: 419 PQFYKSKGIVHQTSCVESPQQNGRVERKLQHILNVGRALLFQSKRP-KFFGLMLSYMLPI 243
FY SK IVHQTSCV +PQQNGRVERK Q IL + RALL QS P K++G + + + +
Sbjct: 632 SSFYASKRIVHQTSCVYTPQQNGRVERKHQCILAIARALLIQSHLPAKYWGYAVLHSVYL 691
Query: 242 LS 237
++
Sbjct: 692 MN 693
Score = 110 bits (275), Expect = 3e-21
Identities = 48/104 (46%), Positives = 73/104 (70%)
Frame = -2
Query: 312 KSLIISV*APKIFWSYAVLYATYIVNRVPSPLLQNKCPYTLLYGQTPDLNQIRVFGCLCF 133
++L+I P +W YAVL++ Y++NR+PS ++ PY L+ + PD++ +++FGCLC+
Sbjct: 668 RALLIQSHLPAKYWGYAVLHSVYLMNRMPSVAIEGGLPYHKLHNRLPDISMLKIFGCLCY 727
Query: 132 ASTLTAHRTKLEPRARKSVFLGQKNGVKGFVLLDINSRQIFISR 1
ST HR KL+ RARK FLG K+G KGFV LD++S +I +SR
Sbjct: 728 VSTTDVHRLKLDHRARKCAFLGFKSGTKGFVALDLHSYEIVVSR 771
Score = 82.4 bits (202), Expect = 2e-12
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Frame = -2
Query: 1461 HSLGKAQILLMDPLPSINKVFSMVIHHERQNIQIVSDDSFVNAVDXXXXXXXXXXGYNQN 1282
+++ ++QIL+M+P P IN FSM+I HE N + V G +
Sbjct: 181 YAVVRSQILIMEPFPDINTAFSMIIQHESFNGLEAVEAPQVELNLAHGARHAPSKGKSAY 240
Query: 1281 FDGRNSNKICSFCGKTGHTVDVCYRKYGYPPNYFQKNPSVASSSANESYEQKDESSVADK 1102
N ++ C+FCG+ GH + +CYRK GYPP + ++ S SA SY S+ +D
Sbjct: 241 HPPSNGDQSCTFCGRKGHDISICYRKNGYPPGFKYRDGSTPPKSAMASYV---ASANSDT 297
Query: 1101 EPKANLPT----FTTEQYEKLLALIQGNGQSQ----HAMLTTQGSSSTQ 979
+P A T F+ E++E L +L++ + S H T SSS +
Sbjct: 298 KPAAAKSTGSLGFSAEEFEALRSLLKNHKPSASPHLHQFTTASSSSSAE 346
Score = 76.6 bits (187), Expect = 1e-10
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = -3
Query: 1658 DPSQNPTSHYFVHPSDGPNTVTVTPVLNGSNYHVWARSMRRALGSKNKFRFVDGSIDPPS 1479
D SQNP +++HPS+ P V PVL+G NYHVWARSM++A+ +KNK RF+DGS P+
Sbjct: 20 DHSQNP---FYIHPSENPAIPLVNPVLDGKNYHVWARSMKKAIITKNKLRFLDGSSPMPN 76
Query: 1478 IMDPTYTAWE 1449
+D T ++
Sbjct: 77 ELDATIVYYD 86
>KYP51629.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 191
Score = 224 bits (572), Expect = 2e-66
Identities = 102/192 (53%), Positives = 142/192 (73%), Gaps = 4/192 (2%)
Frame = -3
Query: 926 MIGLAN*CEGLYSLVVDAKNAFVSSTARGSDSIPAEA----LWHFRLGHMSNKRLNLVHS 759
MIGLA+ +GLY LV++ K + + + ++S+ A LWH RLGH+S RLNL+H
Sbjct: 1 MIGLASLKQGLYHLVIN-KEGCLPTFSSSANSLTANTNNKNLWHLRLGHLSGSRLNLLHE 59
Query: 758 QFSFVYVDHNSVCDVCHYARHKKLPYFLTLSKATKPYELIHFDIWGPISTSSVHGHKYFL 579
QF F+ N CD+CH ++ KK PY ++ S+ATK ++LIH DIWGP S S++GHKYFL
Sbjct: 60 QFPFISKHINETCDICHLSKQKKFPYSISTSRATKMFDLIHMDIWGPFSKPSIYGHKYFL 119
Query: 578 TVLDDYSRFTWIILLKSKAKVQLHVQDFVTMVEKEYDAKIKIICTDNGPEFLLPQFYKSK 399
T+LDD+SR+TWI+LLKSKA+VQ HVQ+F+ ++E ++ IKI+ +DNGPEF L F+ SK
Sbjct: 120 TILDDFSRYTWIVLLKSKAEVQSHVQNFIALIENQFHTTIKILRSDNGPEFSLKNFFASK 179
Query: 398 GIVHQTSCVESP 363
GI+HQTSCV++P
Sbjct: 180 GIIHQTSCVDTP 191