BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza30_contig00002646
         (2489 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_004489339.1 PREDICTED: chloroplastic group IIA intron splicin...  1160   0.0  
XP_019442595.1 PREDICTED: CRM-domain containing factor CFM2, chl...  1060   0.0  
OIW12416.1 hypothetical protein TanjilG_04165 [Lupinus angustifo...  1054   0.0  
XP_015967744.1 PREDICTED: CRM-domain containing factor CFM2, chl...  1039   0.0  
XP_016203225.1 PREDICTED: CRM-domain containing factor CFM2, chl...  1037   0.0  
XP_003618343.2 group IIA intron splicing facilitator CRS1 [Medic...  1019   0.0  
XP_003554854.1 PREDICTED: chloroplastic group IIA intron splicin...  1004   0.0  
XP_004489340.1 PREDICTED: chloroplastic group IIA intron splicin...   999   0.0  
KRG93411.1 hypothetical protein GLYMA_19G014100 [Glycine max]         998   0.0  
XP_007151135.1 hypothetical protein PHAVU_004G020800g [Phaseolus...   971   0.0  
KJB33714.1 hypothetical protein B456_006G027700 [Gossypium raimo...   896   0.0  
XP_012483760.1 PREDICTED: chloroplastic group IIA intron splicin...   892   0.0  
XP_012483761.1 PREDICTED: chloroplastic group IIA intron splicin...   891   0.0  
XP_016672839.1 PREDICTED: CRM-domain containing factor CFM2, chl...   891   0.0  
XP_016672841.1 PREDICTED: CRM-domain containing factor CFM2, chl...   891   0.0  
EOY02282.1 CRM family member 2, putative isoform 2 [Theobroma ca...   891   0.0  
CBI34982.3 unnamed protein product, partial [Vitis vinifera]          889   0.0  
XP_012483758.1 PREDICTED: chloroplastic group IIA intron splicin...   888   0.0  
XP_002275511.1 PREDICTED: CRM-domain containing factor CFM2, chl...   889   0.0  
XP_016672837.1 PREDICTED: CRM-domain containing factor CFM2, chl...   888   0.0  

>XP_004489339.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Cicer arietinum]
          Length = 1019

 Score = 1160 bits (3000), Expect = 0.0
 Identities = 621/911 (68%), Positives = 680/911 (74%), Gaps = 82/911 (9%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALXXXXXXXXXXXXXXXXXX 174
            AGEIFVPLPH LPK RVGHT+D SWSTPENPVP  G G   L                  
Sbjct: 81   AGEIFVPLPHNLPKYRVGHTLDPSWSTPENPVPFPGAGIEKLSENEVERQRLERAKAREE 140

Query: 175  XXXXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGK 354
                                         PT+AELSLT+ EIMRL KLGF MK+K+KVGK
Sbjct: 141  KKR------------------------RVPTLAELSLTDGEIMRLTKLGFEMKQKIKVGK 176

Query: 355  AGITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYR 534
            AGITEGIVNGIHE WR  EVV+IVCEDLCR NMKRTHD+LERKTGGLVVWRSGSKIILYR
Sbjct: 177  AGITEGIVNGIHERWRRSEVVRIVCEDLCRINMKRTHDILERKTGGLVVWRSGSKIILYR 236

Query: 535  GIDYKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAK 714
            GIDYKYPYFLSDKVLRD+   DA+QHMDGDDKNC+E+ES+SSEMNS THA  +SN +T K
Sbjct: 237  GIDYKYPYFLSDKVLRDDKIDDALQHMDGDDKNCDERESYSSEMNSTTHASHSSNIRTVK 296

Query: 715  PALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPG 894
            PAL+QGVGTPNKVRFQLPGEAEL+E+ D LLEGLGP+FTDWWGYDP+PVDADLLPAVIPG
Sbjct: 297  PALVQGVGTPNKVRFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDPVPVDADLLPAVIPG 356

Query: 895  FRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIV 1074
            FR+PFRLLPYGVKS LTDDE+TTL+RLGRPLP HFALGRN KLQGLAAAIIKLWERCEI 
Sbjct: 357  FRQPFRLLPYGVKSNLTDDELTTLKRLGRPLPCHFALGRNRKLQGLAAAIIKLWERCEIA 416

Query: 1075 KIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIV 1254
            KIAVKRGVQNT ++ MAEEIK+LTGGTLLSR+ + IV YRGKDFLPAA SSAI+QRRN++
Sbjct: 417  KIAVKRGVQNTSNKIMAEEIKHLTGGTLLSRDKDVIVIYRGKDFLPAAASSAIQQRRNVL 476

Query: 1255 TNKLKAENSSSDAV-----------------IKQRMFTKAEAALKRTSNKLSMXXXXXXX 1383
             NK+KAENSSS  V                 I++R+ TKA+AA+KRTS KLS        
Sbjct: 477  INKVKAENSSSVTVSPHSEAKDMAFLKDTEIIEKRIMTKAKAAIKRTSIKLSQALEKKAK 536

Query: 1384 XXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHL 1563
                         P EQEI KEGITEEERYMLR+IGLKM PFLLLGRRGVFDGTVENMHL
Sbjct: 537  AEKLLAILEKVESPQEQEIDKEGITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHL 596

Query: 1564 HWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPST 1743
            HWKYRELVKIIC QGSLESVHQ A TLEAESGGILVAVERV+KG+AIIVYRGKNYSRPS 
Sbjct: 597  HWKYRELVKIICNQGSLESVHQTALTLEAESGGILVAVERVSKGHAIIVYRGKNYSRPSC 656

Query: 1744 LRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKDEANSKQIAEELRSD 1923
            LRP+TLLNKKQALKRSIEAQR E+LKLHVLKLDKNINELK QMVKDEA+SKQIAE LRSD
Sbjct: 657  LRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNINELKLQMVKDEASSKQIAETLRSD 716

Query: 1924 MATDRHEACSDSIN--------------------------------CNSPKEASVDNQQ- 2004
            +A D+H   S+SIN                                CNS KEASVDNQQ 
Sbjct: 717  LAIDKHGGSSNSINCNSPKEASVHNQQAIEEQHIELIDGVSSNSLNCNSSKEASVDNQQQ 776

Query: 2005 ------------------------------AIQEQPVELIDSGGARQSEPESSAGLIHKE 2094
                                          AIQEQ +ELID+GGARQ EPESSAGL+H+E
Sbjct: 777  AIEEQHIELIDGASSNLISSPEEASVGNQRAIQEQYIELIDTGGARQGEPESSAGLVHQE 836

Query: 2095 KQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXXAPVIKGSSNELPSTSLYLSNRER 2274
            +QLDE +DSVVDTGHCVSNNKAME             APVI  SS ELPS SLYLSNRER
Sbjct: 837  RQLDEESDSVVDTGHCVSNNKAMEASVASLKSDPEPSAPVINKSSIELPSRSLYLSNRER 896

Query: 2275 LLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSE 2454
            LLLR+QAL +KKRP+LAIGKSN +TG+AKAI  HF+KHPF IVNVKGRAKGTSV E+VS+
Sbjct: 897  LLLRRQALNMKKRPLLAIGKSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSK 956

Query: 2455 LEQATGAVLVS 2487
            LE ATGAVLVS
Sbjct: 957  LEHATGAVLVS 967


>XP_019442595.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Lupinus
            angustifolius]
          Length = 1009

 Score = 1060 bits (2741), Expect = 0.0
 Identities = 577/904 (63%), Positives = 660/904 (73%), Gaps = 75/904 (8%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALXXXXXXXXXXXXXXXXXX 174
            AG+IFVPLPHQLPK RVGHTID SWST +NPVP  G G + L                  
Sbjct: 79   AGKIFVPLPHQLPKYRVGHTIDSSWSTFDNPVPVPGTGISLLRQNELASVAKQQKKKEVE 138

Query: 175  XXXXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFG--MKKKLKV 348
                                        APT+AEL+L+++EI RL  LG G  MK+KLKV
Sbjct: 139  ES-------------------------RAPTLAELNLSKSEIRRLTTLGLGLGMKQKLKV 173

Query: 349  GKAGITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIIL 528
            GKAGITEGIVNGIHE W+  EVV+IVCED+ + NMKRTHDLLERKTGGLVVWRSG K+IL
Sbjct: 174  GKAGITEGIVNGIHERWQRVEVVRIVCEDISKLNMKRTHDLLERKTGGLVVWRSGFKLIL 233

Query: 529  YRGIDYKYPYFLSDKVLRDENNGDAMQHMD-GDDKNCNEKESHSSEMNSATHAGQNSNFK 705
            YRG DYKYPYF+SDKV R++N  DA+QH + GDD+N + +ESHSSE NSAT A Q+SNF 
Sbjct: 234  YRGADYKYPYFISDKVSRNDNTDDALQHSENGDDQNSDIRESHSSEFNSATSAEQSSNFN 293

Query: 706  TAKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAV 885
            +AKPALI+GVG+PNKVRFQLPGEAEL EDAD+LL GLGP+FTDWWGYDPLP+DADLLPAV
Sbjct: 294  SAKPALIEGVGSPNKVRFQLPGEAELAEDADRLLVGLGPRFTDWWGYDPLPIDADLLPAV 353

Query: 886  IPGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERC 1065
            +PG+RKPFRLLPYGV SKLTDDEMTT+RRL RPLP HFALGRN K QGLAAAIIKLWERC
Sbjct: 354  VPGYRKPFRLLPYGVSSKLTDDEMTTMRRLARPLPCHFALGRNRKHQGLAAAIIKLWERC 413

Query: 1066 EIVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRR 1245
            EI KIA+KRGVQNT+SE MAEE+KYLTGGTLL+R+ EFIVFYRGKDFLPAAVSSAIE+RR
Sbjct: 414  EIAKIAIKRGVQNTNSELMAEELKYLTGGTLLARDREFIVFYRGKDFLPAAVSSAIEKRR 473

Query: 1246 NI--VTNKLKAENSSS--------------------------DAVIKQRMFTKAEAALKR 1341
            NI    +KLKA+NSSS                           AV KQR     EAA+K+
Sbjct: 474  NIGIYKDKLKAQNSSSVTVTPNLEHGTVECDSEGNGMAFQKDTAVPKQRKLAGVEAAIKK 533

Query: 1342 TSNKLSMXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLG 1521
            TS +LS                       EQEI KEGITEEERYMLR+IGLKM PFLLLG
Sbjct: 534  TSIRLSEALERKTNAEKLLAELNNTESLQEQEIDKEGITEEERYMLRRIGLKMKPFLLLG 593

Query: 1522 RRGVFDGTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYA 1701
            RRGV+DGTVENMHLHWKYRELVK++CK GSLE V++IARTLEAESGGILVAVER  +GYA
Sbjct: 594  RRGVYDGTVENMHLHWKYRELVKVLCKPGSLEFVYEIARTLEAESGGILVAVERARRGYA 653

Query: 1702 IIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKD 1881
            IIVYRGKNY RP++LRPQTLL+++ A+KRSIEAQR ESLKLHVLKLDKNIN+LK Q+ KD
Sbjct: 654  IIVYRGKNYIRPASLRPQTLLSRRAAMKRSIEAQRRESLKLHVLKLDKNINQLKLQLDKD 713

Query: 1882 -EANSKQIAEELRSDMATDRHE--ACSDSINCNSPKEASVDNQQAIQEQPVELIDSGGAR 2052
             EANSKQI E  + D+A D+ +   CS+SIN +SPKEA V+NQQ +QE+ +ELID GG +
Sbjct: 714  KEANSKQIEEVTKLDLAADKDKDGVCSNSINLDSPKEACVENQQPVQEEQLELIDDGGIQ 773

Query: 2053 QS---------------------------------------EPESSAGLIHKEKQLDEVN 2115
            +                                        EPE  A LIHKE QL  V+
Sbjct: 774  EQQLELIDDGGVQEQQLQLTGDGGIQEQQLQLIGDGEDYRHEPEPWASLIHKETQLAGVS 833

Query: 2116 DSVVDTGHCVSNNKAMEXXXXXXXXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQA 2295
            DSVV+T HCVSNNK +E             AP+I  SSN+LPS S++LSN+ERLLLRKQA
Sbjct: 834  DSVVETEHCVSNNKEIEPSVTSSKSDPEPSAPMINRSSNKLPSRSVHLSNKERLLLRKQA 893

Query: 2296 LKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGA 2475
            L +KKRPVLA+GKSN +TGVAK INTHF+KHPFAIVNVKGRAKGTSVQEVV +LEQATGA
Sbjct: 894  LMMKKRPVLAVGKSNTVTGVAKTINTHFKKHPFAIVNVKGRAKGTSVQEVVLKLEQATGA 953

Query: 2476 VLVS 2487
            VLVS
Sbjct: 954  VLVS 957


>OIW12416.1 hypothetical protein TanjilG_04165 [Lupinus angustifolius]
          Length = 986

 Score = 1054 bits (2726), Expect = 0.0
 Identities = 570/881 (64%), Positives = 658/881 (74%), Gaps = 52/881 (5%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALXXXXXXXXXXXXXXXXXX 174
            AG+IFVPLPHQLPK RVGHTID SWST +NPVP  G G + L                  
Sbjct: 79   AGKIFVPLPHQLPKYRVGHTIDSSWSTFDNPVPVPGTGISLLRQNELASVAKQQKKKEVE 138

Query: 175  XXXXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFG--MKKKLKV 348
                                        APT+AEL+L+++EI RL  LG G  MK+KLKV
Sbjct: 139  ES-------------------------RAPTLAELNLSKSEIRRLTTLGLGLGMKQKLKV 173

Query: 349  GKAGITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIIL 528
            GKAGITEGIVNGIHE W+  EVV+IVCED+ + NMKRTHDLLERKTGGLVVWRSG K+IL
Sbjct: 174  GKAGITEGIVNGIHERWQRVEVVRIVCEDISKLNMKRTHDLLERKTGGLVVWRSGFKLIL 233

Query: 529  YRGIDYKYPYFLSDKVLRDENNGDAMQHMD-GDDKNCNEKESHSSEMNSATHAGQNSNFK 705
            YRG DYKYPYF+SDKV R++N  DA+QH + GDD+N + +ESHSSE NSAT A Q+SNF 
Sbjct: 234  YRGADYKYPYFISDKVSRNDNTDDALQHSENGDDQNSDIRESHSSEFNSATSAEQSSNFN 293

Query: 706  TAKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAV 885
            +AKPALI+GVG+PNKVRFQLPGEAEL EDAD+LL GLGP+FTDWWGYDPLP+DADLLPAV
Sbjct: 294  SAKPALIEGVGSPNKVRFQLPGEAELAEDADRLLVGLGPRFTDWWGYDPLPIDADLLPAV 353

Query: 886  IPGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERC 1065
            +PG+RKPFRLLPYGV SKLTDDEMTT+RRL RPLP HFALGRN K QGLAAAIIKLWERC
Sbjct: 354  VPGYRKPFRLLPYGVSSKLTDDEMTTMRRLARPLPCHFALGRNRKHQGLAAAIIKLWERC 413

Query: 1066 EIVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRR 1245
            EI KIA+KRGVQNT+SE MAEE+KYLTGGTLL+R+ EFIVFYRGKDFLPAAVSSAIE+RR
Sbjct: 414  EIAKIAIKRGVQNTNSELMAEELKYLTGGTLLARDREFIVFYRGKDFLPAAVSSAIEKRR 473

Query: 1246 N--IVTNKLKAENSSS--------------------------DAVIKQRMFTKAEAALKR 1341
            N  I  +KLKA+NSSS                           AV KQR     EAA+K+
Sbjct: 474  NIGIYKDKLKAQNSSSVTVTPNLEHGTVECDSEGNGMAFQKDTAVPKQRKLAGVEAAIKK 533

Query: 1342 TSNKLSMXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLG 1521
            TS +LS                       EQEI KEGITEEERYMLR+IGLKM PFLLLG
Sbjct: 534  TSIRLSEALERKTNAEKLLAELNNTESLQEQEIDKEGITEEERYMLRRIGLKMKPFLLLG 593

Query: 1522 RRGVFDGTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYA 1701
            RRGV+DGTVENMHLHWKYRELVK++CK GSLE V++IARTLEAESGGILVAVER  +GYA
Sbjct: 594  RRGVYDGTVENMHLHWKYRELVKVLCKPGSLEFVYEIARTLEAESGGILVAVERARRGYA 653

Query: 1702 IIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKD 1881
            IIVYRGKNY RP++LRPQTLL+++ A+KRSIEAQR ESLKLHVLKLDKNIN+LK Q+ KD
Sbjct: 654  IIVYRGKNYIRPASLRPQTLLSRRAAMKRSIEAQRRESLKLHVLKLDKNINQLKLQLDKD 713

Query: 1882 -EANSKQIAEELRSDMATDRHE--ACSDSINCNSPKEASVDNQQAIQEQPVELIDSGGAR 2052
             EANSKQI E  + D+A D+ +   CS+SIN +SPKEA V+NQQ +QE+ +ELID GG +
Sbjct: 714  KEANSKQIEEVTKLDLAADKDKDGVCSNSINLDSPKEACVENQQPVQEEQLELIDDGGIQ 773

Query: 2053 QSEPE---------------SSAGLIHKEKQL-DEVNDSVVDTGHCVSNNKAMEXXXXXX 2184
            + + E                  G+  ++ QL  +V+DSVV+T HCVSNNK +E      
Sbjct: 774  EQQLELIDDGGVQEQQLQLTGDGGIQEQQLQLIGDVSDSVVETEHCVSNNKEIEPSVTSS 833

Query: 2185 XXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKA 2364
                   AP+I  SSN+LPS S++LSN+ERLLLRKQAL +KKRPVLA+GKSN +TGVAK 
Sbjct: 834  KSDPEPSAPMINRSSNKLPSRSVHLSNKERLLLRKQALMMKKRPVLAVGKSNTVTGVAKT 893

Query: 2365 INTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            INTHF+KHPFAIVNVKGRAKGTSVQEVV +LEQATGAVLVS
Sbjct: 894  INTHFKKHPFAIVNVKGRAKGTSVQEVVLKLEQATGAVLVS 934


>XP_015967744.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Arachis
            duranensis]
          Length = 984

 Score = 1039 bits (2686), Expect = 0.0
 Identities = 561/857 (65%), Positives = 638/857 (74%), Gaps = 28/857 (3%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXX 180
            AGEIFVPLP +LP  RVGHTID SWSTPENPVP  G A L                    
Sbjct: 99   AGEIFVPLPTRLPIHRVGHTIDPSWSTPENPVPVPGIALLRQNELAKKKENAEEKRRRAR 158

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAG 360
                                      APT+AELSL++AEI RL   G GMK+KLK+GKAG
Sbjct: 159  EEARE--------------------RAPTLAELSLSDAEIRRLTTAGLGMKQKLKIGKAG 198

Query: 361  ITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGI 540
            ITEGIV GIHE WR  EVV+IVCED+C+ NMKRTHDLLERKTGGLVVWRSGSKI+LYRG+
Sbjct: 199  ITEGIVQGIHERWRRSEVVRIVCEDICKLNMKRTHDLLERKTGGLVVWRSGSKILLYRGV 258

Query: 541  DYKYPYFLSDKVLRDENNGDAMQHMD-GDDKNCNEKESHSSEMNSATHAGQNSNFKTAKP 717
            +YKYPYFLSD+V   +N  DA+Q  +  DDK+ +E+ SH+S+MN  T+A Q S+ K AKP
Sbjct: 259  NYKYPYFLSDEVFGHKNIDDALQLSEHSDDKDFDERHSHASKMNLVTNADQRSDIKAAKP 318

Query: 718  ALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGF 897
            ALI+GVG  NKVRF+LPGE EL  DAD+LL GLGP+FTDWWGYDPLPVDADLLPAVIPG+
Sbjct: 319  ALIKGVGNLNKVRFELPGEVELAADADQLLIGLGPRFTDWWGYDPLPVDADLLPAVIPGY 378

Query: 898  RKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVK 1077
            RKPFRLLPYGVKSKLTDDEMTTLRRLG+PLP HFALGRN K QGLAAAIIKLWERCEIVK
Sbjct: 379  RKPFRLLPYGVKSKLTDDEMTTLRRLGKPLPCHFALGRNRKHQGLAAAIIKLWERCEIVK 438

Query: 1078 IAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVT 1257
            IA+KRGVQNT+SE MAEEIK+LTGGTLL+R+ EFIV YRGKDFLP+AVSSAI++RRNI  
Sbjct: 439  IAIKRGVQNTNSEIMAEEIKHLTGGTLLARDREFIVLYRGKDFLPSAVSSAIDERRNIEL 498

Query: 1258 NKLKAENSSS--------------------------DAVIKQRMFTKAEAALKRTSNKLS 1359
            +KLKAE+SSS                           A+++Q MFT AEA +KR S KLS
Sbjct: 499  SKLKAESSSSVTVTPGQKHGAIECVSEGSGTTSQKGTAIVEQGMFTDAEATIKRNSIKLS 558

Query: 1360 MXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFD 1539
            M                    P E+EI KEGITEEERYMLRKIGLKM PFLLLGRRGVFD
Sbjct: 559  MALERKAKAEKLLAELENAECPQEKEIDKEGITEEERYMLRKIGLKMKPFLLLGRRGVFD 618

Query: 1540 GTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRG 1719
            GTVENMHLHWKYRELVKIIC + S E++HQIA+TLEAESGGIL+AVERVNKGYA+IVYRG
Sbjct: 619  GTVENMHLHWKYRELVKIICNRQSPEAIHQIAQTLEAESGGILIAVERVNKGYAVIVYRG 678

Query: 1720 KNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKD-EANSK 1896
            KNYSRP++LRP+TLLNKK ALKR +EAQR ESLKLHVLKLDKNI +LK +M KD EANSK
Sbjct: 679  KNYSRPASLRPKTLLNKKAALKRFLEAQRRESLKLHVLKLDKNIKDLKLKMDKDKEANSK 738

Query: 1897 QIAEELRSDMATDRHEACSDSINCNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESSA 2076
              AEE+R DM      + S+S+N NS KE S++NQ++ Q+Q   +ID  G RQ E ES +
Sbjct: 739  HEAEEMRVDMG-----SFSNSVNLNSLKEVSIENQESRQKQ---MIDDDGTRQGEEESMS 790

Query: 2077 GLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXXAPVIKGSSNELPSTSLY 2256
             LI ++ QLD V+ S VDT H +SNN   E              PVI  SS  LP   +Y
Sbjct: 791  DLIIEKTQLDGVSVSAVDTRHGISNNNPPESYDTSSKCDPEPSVPVINRSSKGLPIRPVY 850

Query: 2257 LSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSV 2436
            LSNRERLLLR+QALK+ KRPVLAIGKSNI+TGVAKAI THFQKHP AIVN+KGRAKGTSV
Sbjct: 851  LSNRERLLLRRQALKMTKRPVLAIGKSNIVTGVAKAIKTHFQKHPLAIVNIKGRAKGTSV 910

Query: 2437 QEVVSELEQATGAVLVS 2487
            QEVV +LEQATGAVLVS
Sbjct: 911  QEVVFKLEQATGAVLVS 927


>XP_016203225.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic [Arachis
            ipaensis]
          Length = 984

 Score = 1037 bits (2681), Expect = 0.0
 Identities = 560/857 (65%), Positives = 637/857 (74%), Gaps = 28/857 (3%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXX 180
            AGEIFVPLP +LP  RVGHTID SWSTPENPVP  G A L                    
Sbjct: 99   AGEIFVPLPTRLPIHRVGHTIDPSWSTPENPVPVPGIALLRQNELAKRKENAEEKRRRAR 158

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAG 360
                                      APT+AELSL++AEI RL   G GMK+KLK+GKAG
Sbjct: 159  EAARE--------------------RAPTLAELSLSDAEIRRLTTAGLGMKQKLKIGKAG 198

Query: 361  ITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGI 540
            ITEGIV GIHE WR  EVV+IVCED+C+ NMKRTHDLLERKTGGLVVWRSGSKI+LYRG+
Sbjct: 199  ITEGIVQGIHERWRRSEVVRIVCEDICKLNMKRTHDLLERKTGGLVVWRSGSKILLYRGV 258

Query: 541  DYKYPYFLSDKVLRDENNGDAMQHMD-GDDKNCNEKESHSSEMNSATHAGQNSNFKTAKP 717
            DYKYPYFLSD+V   +N  + +Q  +  DDK+ +E++SH+S+MN  T+A Q S+ K AKP
Sbjct: 259  DYKYPYFLSDEVSGHKNIDNVLQLSEHSDDKDFDERQSHASKMNLVTNADQRSDIKAAKP 318

Query: 718  ALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGF 897
            ALI+GVG PNKVRF+LPGE E+  DAD+LL GLGP+FTDWWGYDPLPVDADLLPAVIPG+
Sbjct: 319  ALIKGVGNPNKVRFELPGEVEIAADADQLLIGLGPRFTDWWGYDPLPVDADLLPAVIPGY 378

Query: 898  RKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVK 1077
            RKPFRLLPYGVKSKLTDDEMTTLRRLG+PLP HFALGRN K QGLAAAIIKLWERCEIVK
Sbjct: 379  RKPFRLLPYGVKSKLTDDEMTTLRRLGKPLPCHFALGRNRKHQGLAAAIIKLWERCEIVK 438

Query: 1078 IAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVT 1257
            IA+KRGVQNT+SE MAEEIK+LTGGTLL+R+ EFIV YRGKDFLP+AVSSAI++RRNI  
Sbjct: 439  IAIKRGVQNTNSEIMAEEIKHLTGGTLLARDREFIVLYRGKDFLPSAVSSAIDERRNIEL 498

Query: 1258 NKLKAENSSSDAV--------------------------IKQRMFTKAEAALKRTSNKLS 1359
            +KLKAE+SSSDAV                          ++Q MFT AEA +KR S KLS
Sbjct: 499  SKLKAESSSSDAVTPGKKHGAIECVSEGSGTTSQKGTAIVEQGMFTDAEATIKRNSIKLS 558

Query: 1360 MXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFD 1539
            M                    P E+EI KEGITEEERYMLRKIGLKM PFLLLGRRGVFD
Sbjct: 559  MALERKAKAEKLLAELENAECPQEKEIDKEGITEEERYMLRKIGLKMKPFLLLGRRGVFD 618

Query: 1540 GTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRG 1719
            GTVENMHLHWKYRELVKIIC + S E +HQIA+TLEAESGGIL+AVERVNKGYA+IVYRG
Sbjct: 619  GTVENMHLHWKYRELVKIICNKRSPEIIHQIAQTLEAESGGILIAVERVNKGYAVIVYRG 678

Query: 1720 KNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKD-EANSK 1896
            KNYSRP++LRP+TLLNKK ALKR +EAQR ESLKLHVLKLDKNI +LK +M KD EANSK
Sbjct: 679  KNYSRPASLRPKTLLNKKAALKRFLEAQRRESLKLHVLKLDKNIKDLKLKMDKDKEANSK 738

Query: 1897 QIAEELRSDMATDRHEACSDSINCNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESSA 2076
              AE +R DM      + S+S+N NS KE S++NQ++ Q+Q   +ID  G RQ E ES +
Sbjct: 739  HEAEGMRVDMG-----SFSNSVNLNSLKEVSIENQESRQKQ---MIDDDGTRQGEEESMS 790

Query: 2077 GLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXXAPVIKGSSNELPSTSLY 2256
             LI ++ QLD V+ S VDT H +SNN   E              PV   SS  LP   +Y
Sbjct: 791  DLIIEKTQLDGVSVSAVDTRHGISNNNPPESSDMSSKCDPEPSVPVKNTSSKGLPIRPVY 850

Query: 2257 LSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSV 2436
            LSNRERLLLR+QALK+ KRPVLAIGKSNI+TGVAKAI THFQKHP AIVN+KGRAKGTSV
Sbjct: 851  LSNRERLLLRRQALKMTKRPVLAIGKSNIVTGVAKAIKTHFQKHPLAIVNIKGRAKGTSV 910

Query: 2437 QEVVSELEQATGAVLVS 2487
            QEVV +LEQATGAVLVS
Sbjct: 911  QEVVFKLEQATGAVLVS 927


>XP_003618343.2 group IIA intron splicing facilitator CRS1 [Medicago truncatula]
            AES74561.2 group IIA intron splicing facilitator CRS1
            [Medicago truncatula]
          Length = 1045

 Score = 1019 bits (2634), Expect = 0.0
 Identities = 563/940 (59%), Positives = 645/940 (68%), Gaps = 111/940 (11%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALXXXXXXXXXXXXXXXXXX 174
            AGEIF+PLPH LPK RVGHT+D SWSTPENPVP  G G   L                  
Sbjct: 79   AGEIFLPLPHTLPKYRVGHTLDLSWSTPENPVPLVGAGLEKLSENEVERARLAKEKKREE 138

Query: 175  XXXXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGK 354
                                         PT+AELSLT+ EI+RLR+LG+ MK+K+KVGK
Sbjct: 139  KRK------------------------RVPTLAELSLTDGEILRLRELGYQMKQKIKVGK 174

Query: 355  AGITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYR 534
            AG+TEGIVNGIHE WR  EVV++VCEDLCR NMKRTHD+LERKTGGLVVWRSGSKIILYR
Sbjct: 175  AGVTEGIVNGIHERWRRSEVVRVVCEDLCRINMKRTHDILERKTGGLVVWRSGSKIILYR 234

Query: 535  GIDYKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAK 714
            GIDYKYPYFLSD+VLR+E + DA+Q MD DD++ +E+++HSSEM+SATHAGQ+SN KT K
Sbjct: 235  GIDYKYPYFLSDEVLREEES-DALQPMDSDDESIDERKTHSSEMSSATHAGQSSNIKTVK 293

Query: 715  PALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPG 894
            PAL+QGVGTPN+VRFQLPGEAEL+E+ D LLEGLGP+FTDWWGYDP+PVDADLLPAVIPG
Sbjct: 294  PALVQGVGTPNRVRFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDPVPVDADLLPAVIPG 353

Query: 895  FRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIV 1074
            FR PFRLLPYGV+SKLTDDEMTTL+RLGR LP HFALGRN KLQG+AAAIIK WERCEIV
Sbjct: 354  FRPPFRLLPYGVQSKLTDDEMTTLKRLGRTLPCHFALGRNWKLQGVAAAIIKFWERCEIV 413

Query: 1075 KIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIV 1254
             IAVKRGVQNT +  MAEEIKYLTGGTLLSRN E IV YRGKDFLPAAVSSAI++R   V
Sbjct: 414  NIAVKRGVQNTSNRKMAEEIKYLTGGTLLSRNKEVIVIYRGKDFLPAAVSSAIKKRWKAV 473

Query: 1255 TNKLKAENSSS-----------------DAVIKQRMFTKAEAALKRTSNKLSMXXXXXXX 1383
             NK  AEN S+                    I++ +  KA+AA++RTS KL+        
Sbjct: 474  KNKENAENRSAITASSHSERKHMTFIKDKETIEKPLLMKAKAAIQRTSFKLAQALEKKEK 533

Query: 1384 XXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHL 1563
                           E+EI KE ITEEERYMLR+IGLKM PFLLLGRRGVFDGTVENMHL
Sbjct: 534  AEKLLESLEKDESLQEEEIDKESITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHL 593

Query: 1564 HWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPST 1743
            HWKYRELVKIIC Q S+E  HQ ARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRP +
Sbjct: 594  HWKYRELVKIICNQESVEYAHQTARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPDS 653

Query: 1744 LRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKDEANSKQIAEELRSD 1923
            LRP+TLLNKKQALKRSIEAQR E+LKLHVLKLDKNINELK QMVKDEA+S+QIA+ELRSD
Sbjct: 654  LRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNINELKHQMVKDEASSEQIAKELRSD 713

Query: 1924 MATDR--HEACSDS----------------------------------INCNSPKEASVD 1995
            +AT+    EA  D+                                     NS +EASVD
Sbjct: 714  LATENSPEEASVDNQQPIQEQHIELIGSGGECQGEPESLTGLVHQERQATKNSLEEASVD 773

Query: 1996 NQQAIQEQPVELIDSGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXX 2175
            NQQ IQEQ +ELID+G   Q EPES  GL+H+E+QLDEV+D VVDTGH VS NKA E   
Sbjct: 774  NQQPIQEQHIELIDTGEECQGEPESLTGLVHQERQLDEVDDFVVDTGHSVSTNKASEGSI 833

Query: 2176 XXXXXXXXXXAPVIKGSSNELPSTSLY--------------------------------- 2256
                      APVI  +SNE PS+ ++                                 
Sbjct: 834  ISFKSDPEPSAPVINENSNEFPSSLVHPKRQLDEVSDSVVDTGHSVSTNDAMEASIISFK 893

Query: 2257 ----------------LSNRERLLLRKQAL-------KIKKRPVLAIGKSNIMTGVAKAI 2367
                             S+R   L  ++ L       ++KK P++ IGKSNI+ G+ +AI
Sbjct: 894  RDPEPSAPVINKSPIEFSSRSSSLSNRERLLLRKQALRMKKIPIVPIGKSNIVAGLEEAI 953

Query: 2368 NTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
                ++HPF IVNVKGRAKGTSV E+VS LE+ATGAVLVS
Sbjct: 954  KNLLRRHPFVIVNVKGRAKGTSVHELVSILEEATGAVLVS 993


>XP_003554854.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max] KRG93410.1 hypothetical
            protein GLYMA_19G014100 [Glycine max]
          Length = 1028

 Score = 1004 bits (2597), Expect = 0.0
 Identities = 563/895 (62%), Positives = 632/895 (70%), Gaps = 66/895 (7%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALXXXXXXXXXXXXXXXXXX 174
            + EI VP PH+LPK+RVGHT + SWSTP NPVP  G G AAL                  
Sbjct: 76   SSEIHVPFPHELPKRRVGHTFEPSWSTPLNPVPVPGSGIAALSKSEVRRQKKLRAEESRR 135

Query: 175  XXXXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGM-KKKLKVG 351
                                         PT+AELSL ++EI RL  LGF   KKK+++ 
Sbjct: 136  RKEL------------------------VPTLAELSLPDSEIRRLTTLGFSTTKKKVRLA 171

Query: 352  KAGITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILY 531
            KAGITE IV+ IHE W+  EVV++ CE+L R +M+RTHDLLERKTGGLVVWRSG+KIILY
Sbjct: 172  KAGITEQIVDVIHERWKRSEVVRVFCEELSRDDMRRTHDLLERKTGGLVVWRSGTKIILY 231

Query: 532  RGIDYKYPYFLSDKVLRDEN-NGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKT 708
            RG DYKYPYFLSDKV R +N + DA+QH++ DDK C++ ESH SE NS   A +NSN +T
Sbjct: 232  RGADYKYPYFLSDKVTRQDNTSNDALQHVNADDKYCDKSESHLSEKNSVACAVENSNAET 291

Query: 709  AKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVI 888
            AKPALI GVGTPNKVRFQLP EAEL ED D LL GLGP+FTDWWG DPLPVDADLLPAVI
Sbjct: 292  AKPALILGVGTPNKVRFQLPDEAELAEDTDCLLTGLGPRFTDWWGGDPLPVDADLLPAVI 351

Query: 889  PGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCE 1068
             G+RKPFRLLPYGV  KLTDDEMTTL+RLG+PLP HFALGRN KLQGLAAAIIKLWERCE
Sbjct: 352  HGYRKPFRLLPYGVNPKLTDDEMTTLKRLGKPLPCHFALGRNRKLQGLAAAIIKLWERCE 411

Query: 1069 IVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRN 1248
            IVKIAVKRGVQNT S+ MA+E+K+LTGG LLSR+ EF VFYRGKD+LPAAVSSAI+++RN
Sbjct: 412  IVKIAVKRGVQNTSSKIMAKELKHLTGGILLSRDREFFVFYRGKDYLPAAVSSAIKKQRN 471

Query: 1249 IVTNKLKAENSSSDAVI-----------------------KQRMFTKAEAALKRTSNKLS 1359
            I   KLK  NS S  V                        KQRM TKAE A+KRTS KLS
Sbjct: 472  IGMYKLKFGNSLSATVTPNPKDGTIECNSEVKGMNFQKDTKQRMLTKAEEAIKRTSIKLS 531

Query: 1360 MXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFD 1539
            M                    P EQEI KEGI++EE+YMLR+IGL M PFLLLGRRGVFD
Sbjct: 532  MALEKKAKAEKLLEKLINAESPQEQEIDKEGISKEEKYMLRRIGLMMKPFLLLGRRGVFD 591

Query: 1540 GTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRG 1719
            GTVENMHLHWKYRELVKIIC  GSLE VHQIA TLEAESGGILVAVERV KG+AIIVYRG
Sbjct: 592  GTVENMHLHWKYRELVKIICN-GSLEEVHQIALTLEAESGGILVAVERVRKGFAIIVYRG 650

Query: 1720 KNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKDE-ANSK 1896
            KNYS P  LRPQTLLNK+QALKRSIEAQR ESLKL +L LDK INELK Q+V+DE ANSK
Sbjct: 651  KNYSVPVCLRPQTLLNKRQALKRSIEAQRRESLKLRILTLDKEINELKLQIVEDEEANSK 710

Query: 1897 QIAEELRSDMATDRHEACSDSINCNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESSA 2076
            Q+AE  R DMATD HEACS+ IN +SPKEAS DNQQAIQE+PVELIDSGGA Q EPE+S 
Sbjct: 711  QMAEASRLDMATDEHEACSNFINWHSPKEASGDNQQAIQEEPVELIDSGGAHQGEPENSI 770

Query: 2077 G--------------------------------------LIHKEKQLDEVNDSVVDTGHC 2142
                                                   LIHKE Q DEV+DSV DT   
Sbjct: 771  SWNSSIEASIDNQQAIQEHPVELIDGGATHQDEPESWPSLIHKETQSDEVSDSVTDTELH 830

Query: 2143 VSNNKAMEXXXXXXXXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVL 2322
            +SN K ME             APVI  S   LPS S++LS +ERLLLRKQALKIK+ PVL
Sbjct: 831  ISNRKGMESSNSLSKNDREPLAPVIYMS---LPSRSVHLSTKERLLLRKQALKIKQ-PVL 886

Query: 2323 AIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            AIGKSNI++GV + I  HF+KHP A+VNVKGRAKGTSVQE+V +LEQ TGA+LVS
Sbjct: 887  AIGKSNIVSGVVQTIKAHFEKHPLAVVNVKGRAKGTSVQELVFKLEQETGALLVS 941


>XP_004489340.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Cicer arietinum]
          Length = 834

 Score =  999 bits (2582), Expect = 0.0
 Identities = 530/750 (70%), Positives = 582/750 (77%), Gaps = 80/750 (10%)
 Frame = +1

Query: 478  RKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHS 657
            RKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRD+   DA+QHMDGDDKNC+E+ES+S
Sbjct: 33   RKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDDKIDDALQHMDGDDKNCDERESYS 92

Query: 658  SEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDW 837
            SEMNS THA  +SN +T KPAL+QGVGTPNKVRFQLPGEAEL+E+ D LLEGLGP+FTDW
Sbjct: 93   SEMNSTTHASHSSNIRTVKPALVQGVGTPNKVRFQLPGEAELLEEVDSLLEGLGPRFTDW 152

Query: 838  WGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNM 1017
            WGYDP+PVDADLLPAVIPGFR+PFRLLPYGVKS LTDDE+TTL+RLGRPLP HFALGRN 
Sbjct: 153  WGYDPVPVDADLLPAVIPGFRQPFRLLPYGVKSNLTDDELTTLKRLGRPLPCHFALGRNR 212

Query: 1018 KLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRG 1197
            KLQGLAAAIIKLWERCEI KIAVKRGVQNT ++ MAEEIK+LTGGTLLSR+ + IV YRG
Sbjct: 213  KLQGLAAAIIKLWERCEIAKIAVKRGVQNTSNKIMAEEIKHLTGGTLLSRDKDVIVIYRG 272

Query: 1198 KDFLPAAVSSAIEQRRNIVTNKLKAENSSSDAV-----------------IKQRMFTKAE 1326
            KDFLPAA SSAI+QRRN++ NK+KAENSSS  V                 I++R+ TKA+
Sbjct: 273  KDFLPAAASSAIQQRRNVLINKVKAENSSSVTVSPHSEAKDMAFLKDTEIIEKRIMTKAK 332

Query: 1327 AALKRTSNKLSMXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSP 1506
            AA+KRTS KLS                     P EQEI KEGITEEERYMLR+IGLKM P
Sbjct: 333  AAIKRTSIKLSQALEKKAKAEKLLAILEKVESPQEQEIDKEGITEEERYMLRRIGLKMKP 392

Query: 1507 FLLLGRRGVFDGTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERV 1686
            FLLLGRRGVFDGTVENMHLHWKYRELVKIIC QGSLESVHQ A TLEAESGGILVAVERV
Sbjct: 393  FLLLGRRGVFDGTVENMHLHWKYRELVKIICNQGSLESVHQTALTLEAESGGILVAVERV 452

Query: 1687 NKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKR 1866
            +KG+AIIVYRGKNYSRPS LRP+TLLNKKQALKRSIEAQR E+LKLHVLKLDKNINELK 
Sbjct: 453  SKGHAIIVYRGKNYSRPSCLRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNINELKL 512

Query: 1867 QMVKDEANSKQIAEELRSDMATDRHEACSDSIN--------------------------- 1965
            QMVKDEA+SKQIAE LRSD+A D+H   S+SIN                           
Sbjct: 513  QMVKDEASSKQIAETLRSDLAIDKHGGSSNSINCNSPKEASVHNQQAIEEQHIELIDGVS 572

Query: 1966 -----CNSPKEASVDNQQ-------------------------------AIQEQPVELID 2037
                 CNS KEASVDNQQ                               AIQEQ +ELID
Sbjct: 573  SNSLNCNSSKEASVDNQQQAIEEQHIELIDGASSNLISSPEEASVGNQRAIQEQYIELID 632

Query: 2038 SGGARQSEPESSAGLIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXXAPVI 2217
            +GGARQ EPESSAGL+H+E+QLDE +DSVVDTGHCVSNNKAME             APVI
Sbjct: 633  TGGARQGEPESSAGLVHQERQLDEESDSVVDTGHCVSNNKAMEASVASLKSDPEPSAPVI 692

Query: 2218 KGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFA 2397
              SS ELPS SLYLSNRERLLLR+QAL +KKRP+LAIGKSN +TG+AKAI  HF+KHPF 
Sbjct: 693  NKSSIELPSRSLYLSNRERLLLRRQALNMKKRPLLAIGKSNTVTGLAKAIKDHFRKHPFV 752

Query: 2398 IVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            IVNVKGRAKGTSV E+VS+LE ATGAVLVS
Sbjct: 753  IVNVKGRAKGTSVHELVSKLEHATGAVLVS 782



 Score = 67.8 bits (164), Expect = 7e-08
 Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
 Frame = +1

Query: 253 VEAPTVAELS---LTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHEWWRSHEVVKI 423
           VE+P   E+    +TE E   LR++G  MK  L +G+ G+ +G V  +H  W+  E+VKI
Sbjct: 362 VESPQEQEIDKEGITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKI 421

Query: 424 VCEDLCRTNMKRTHDLLERKTGGLVV----WRSGSKIILYRGIDYKYPYFLSDKVLRDEN 591
           +C      ++ +T   LE ++GG++V       G  II+YRG +Y  P  L  + L ++ 
Sbjct: 422 ICNQGSLESVHQTALTLEAESGGILVAVERVSKGHAIIVYRGKNYSRPSCLRPRTLLNKK 481

Query: 592 NG----------DAMQ-HMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVG 738
                       +A++ H+   DKN NE +     +     + Q +    +  A+ +  G
Sbjct: 482 QALKRSIEAQRREALKLHVLKLDKNINELKLQM--VKDEASSKQIAETLRSDLAIDKHGG 539

Query: 739 TPNKVRFQLPGEAEL 783
           + N +    P EA +
Sbjct: 540 SSNSINCNSPKEASV 554


>KRG93411.1 hypothetical protein GLYMA_19G014100 [Glycine max]
          Length = 1034

 Score =  998 bits (2580), Expect = 0.0
 Identities = 563/901 (62%), Positives = 632/901 (70%), Gaps = 72/901 (7%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALXXXXXXXXXXXXXXXXXX 174
            + EI VP PH+LPK+RVGHT + SWSTP NPVP  G G AAL                  
Sbjct: 76   SSEIHVPFPHELPKRRVGHTFEPSWSTPLNPVPVPGSGIAALSKSEVRRQKKLRAEESRR 135

Query: 175  XXXXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGM-KKKLKVG 351
                                         PT+AELSL ++EI RL  LGF   KKK+++ 
Sbjct: 136  RKEL------------------------VPTLAELSLPDSEIRRLTTLGFSTTKKKVRLA 171

Query: 352  KAGITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILY 531
            KAGITE IV+ IHE W+  EVV++ CE+L R +M+RTHDLLERKTGGLVVWRSG+KIILY
Sbjct: 172  KAGITEQIVDVIHERWKRSEVVRVFCEELSRDDMRRTHDLLERKTGGLVVWRSGTKIILY 231

Query: 532  RGIDYKYPYFLSDKVLRDEN-NGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKT 708
            RG DYKYPYFLSDKV R +N + DA+QH++ DDK C++ ESH SE NS   A +NSN +T
Sbjct: 232  RGADYKYPYFLSDKVTRQDNTSNDALQHVNADDKYCDKSESHLSEKNSVACAVENSNAET 291

Query: 709  AKPALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVI 888
            AKPALI GVGTPNKVRFQLP EAEL ED D LL GLGP+FTDWWG DPLPVDADLLPAVI
Sbjct: 292  AKPALILGVGTPNKVRFQLPDEAELAEDTDCLLTGLGPRFTDWWGGDPLPVDADLLPAVI 351

Query: 889  PGFRKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCE 1068
             G+RKPFRLLPYGV  KLTDDEMTTL+RLG+PLP HFALGRN KLQGLAAAIIKLWERCE
Sbjct: 352  HGYRKPFRLLPYGVNPKLTDDEMTTLKRLGKPLPCHFALGRNRKLQGLAAAIIKLWERCE 411

Query: 1069 IVKIAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRN 1248
            IVKIAVKRGVQNT S+ MA+E+K+LTGG LLSR+ EF VFYRGKD+LPAAVSSAI+++RN
Sbjct: 412  IVKIAVKRGVQNTSSKIMAKELKHLTGGILLSRDREFFVFYRGKDYLPAAVSSAIKKQRN 471

Query: 1249 IVTNKLKAENSSSDAV-----------------------IKQRMFTKAEAALKRTSNKLS 1359
            I   KLK  NS S  V                        KQRM TKAE A+KRTS KLS
Sbjct: 472  IGMYKLKFGNSLSATVTPNPKDGTIECNSEVKGMNFQKDTKQRMLTKAEEAIKRTSIKLS 531

Query: 1360 MXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFD 1539
            M                    P EQEI KEGI++EE+YMLR+IGL M PFLLLGRRGVFD
Sbjct: 532  MALEKKAKAEKLLEKLINAESPQEQEIDKEGISKEEKYMLRRIGLMMKPFLLLGRRGVFD 591

Query: 1540 GTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRG 1719
            GTVENMHLHWKYRELVKIIC  GSLE VHQIA TLEAESGGILVAVERV KG+AIIVYRG
Sbjct: 592  GTVENMHLHWKYRELVKIIC-NGSLEEVHQIALTLEAESGGILVAVERVRKGFAIIVYRG 650

Query: 1720 KNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKD-EANSK 1896
            KNYS P  LRPQTLLNK+QALKRSIEAQR ESLKL +L LDK INELK Q+V+D EANSK
Sbjct: 651  KNYSVPVCLRPQTLLNKRQALKRSIEAQRRESLKLRILTLDKEINELKLQIVEDEEANSK 710

Query: 1897 QIAEELRSDM------ATDRHEACSDSINCNSPKEASVDNQQAIQEQPVELIDSGGARQS 2058
            Q+AE  R DM      ATD HEACS+ IN +SPKEAS DNQQAIQE+PVELIDSGGA Q 
Sbjct: 711  QMAEASRLDMFVAWFKATDEHEACSNFINWHSPKEASGDNQQAIQEEPVELIDSGGAHQG 770

Query: 2059 EPESS--------------------------------------AGLIHKEKQLDEVNDSV 2124
            EPE+S                                        LIHKE Q DEV+DSV
Sbjct: 771  EPENSISWNSSIEASIDNQQAIQEHPVELIDGGATHQDEPESWPSLIHKETQSDEVSDSV 830

Query: 2125 VDTGHCVSNNKAMEXXXXXXXXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQALKI 2304
             DT   +SN K ME             APVI  S   LPS S++LS +ERLLLRKQALKI
Sbjct: 831  TDTELHISNRKGMESSNSLSKNDREPLAPVIYMS---LPSRSVHLSTKERLLLRKQALKI 887

Query: 2305 KKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLV 2484
             K+PVLAIGKSNI++GV + I  HF+KHP A+VNVKGRAKGTSVQE+V +LEQ TGA+LV
Sbjct: 888  -KQPVLAIGKSNIVSGVVQTIKAHFEKHPLAVVNVKGRAKGTSVQELVFKLEQETGALLV 946

Query: 2485 S 2487
            S
Sbjct: 947  S 947


>XP_007151135.1 hypothetical protein PHAVU_004G020800g [Phaseolus vulgaris]
            XP_007151136.1 hypothetical protein PHAVU_004G020800g
            [Phaseolus vulgaris] ESW23129.1 hypothetical protein
            PHAVU_004G020800g [Phaseolus vulgaris] ESW23130.1
            hypothetical protein PHAVU_004G020800g [Phaseolus
            vulgaris]
          Length = 960

 Score =  971 bits (2510), Expect = 0.0
 Identities = 522/796 (65%), Positives = 599/796 (75%), Gaps = 54/796 (6%)
 Frame = +1

Query: 262  PTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGITEGIVNGIHEWWRSHEVVKIVCEDLC 441
            PT+AELSL+ AEI RL  +G  +++KL+VGKAGITEGIVNGIHE WR+ EVV+I C+DL 
Sbjct: 113  PTLAELSLSNAEIKRLTTVGLRLRQKLRVGKAGITEGIVNGIHERWRNSEVVRIACDDLS 172

Query: 442  RTNMKRTHDLLERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDKVLRDENNGDAMQHMDG 621
            R NMKRTHDLLERKTGGLVVWRSGSKIILYRG DYKYPYFLSDKVLRD+++GD +QHMD 
Sbjct: 173  RFNMKRTHDLLERKTGGLVVWRSGSKIILYRGPDYKYPYFLSDKVLRDDHSGDVLQHMDE 232

Query: 622  DDKNCNEKESHSSEMNSATHAGQNSNFKTAKPALIQGVGTPNKVRFQLPGEAELVEDADK 801
            DDK+ +++ESH SE NS T+ GQ+ N KT+KPALIQG+GTP KVRFQLPGEAEL +DAD 
Sbjct: 233  DDKSRDKRESHLSEKNSVTYTGQSLNAKTSKPALIQGIGTPKKVRFQLPGEAELAKDADN 292

Query: 802  LLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRKPFRLLPYGVKSKLTDDEMTTLRRLGR 981
            LL G+GP+F DWWGYDPLPVDADLLPAVIPG+RKPFRLLPYGVK KLTDDEMTT+RRLG 
Sbjct: 293  LLTGIGPRFFDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTTMRRLGN 352

Query: 982  PLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIAVKRGVQNTDSETMAEEIKYLTGGTLL 1161
             LP HFALGRN KLQGLA AIIKLWERCEIVKIA+KRGV+NTD E MAEEIKYLTGGTLL
Sbjct: 353  HLPCHFALGRNRKLQGLAVAIIKLWERCEIVKIAIKRGVENTDGEVMAEEIKYLTGGTLL 412

Query: 1162 SRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTNKLKAENSSS--------------DAVI 1299
            +R+ EFIVFYRGKDFLPAAVSSAIEQRR+I  NKLK  NS S              D+V+
Sbjct: 413  ARDKEFIVFYRGKDFLPAAVSSAIEQRRSIGMNKLKTGNSRSVTDARDLNDGTRECDSVV 472

Query: 1300 KQRMF---------TKAEAALKRTSNKLSMXXXXXXXXXXXXXXXXXXXXPPEQEIVKEG 1452
            K   F         T+AE A+K TS KLSM                    P E+EI +EG
Sbjct: 473  KGMNFQKDTKPGILTEAEKAIKSTSIKLSMALEERTKAEKLLAEMENAEKPQEEEINREG 532

Query: 1453 ITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVENMHLHWKYRELVKIICKQG--SLESVH 1626
            ITEEE+YMLR+IGLKM PFLLLGRRGVFDGTV+NMHLHWKYRELVKIIC +   SLE V 
Sbjct: 533  ITEEEKYMLRRIGLKMGPFLLLGRRGVFDGTVQNMHLHWKYRELVKIICNKQTLSLEDVQ 592

Query: 1627 QIARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQR 1806
            QIA+TLEAESGGIL++VE+V KG+AIIVYRGKNYSRP++LRP+TLLNK++ALKRS EAQR
Sbjct: 593  QIAKTLEAESGGILISVEKVGKGHAIIVYRGKNYSRPASLRPRTLLNKREALKRSKEAQR 652

Query: 1807 CESLKLHVLKLDKNINELKRQMVK-----DEANSKQ------IAEELRSDMATDRHEACS 1953
             ESLKLHVLKL  NIN LK QM +     D+  + Q      I      + + D  EA  
Sbjct: 653  HESLKLHVLKLGSNINRLKLQMEQSVELVDDGGAHQSEADNFINWNPNKETSVDNPEAMQ 712

Query: 1954 ------------------DSINCNSPKEASVDNQQAIQEQPVELIDSGGARQSEPESSAG 2079
                               S N NSP+ A VDNQQAIQ+ PVE ID  GA Q EPES  G
Sbjct: 713  GQTVEPIDSGEAHPGEPESSANWNSPEGAFVDNQQAIQDHPVEQIDGRGAHQDEPESWPG 772

Query: 2080 LIHKEKQLDEVNDSVVDTGHCVSNNKAMEXXXXXXXXXXXXXAPVIKGSSNELPSTSLYL 2259
            LI K+++ D V+DS+VDT H VS ++ ME               V   SSNELPS S+ L
Sbjct: 773  LIPKDREFDGVSDSLVDTEHSVSISEVMESSIMSSKSHADLSTLVRDMSSNELPSGSVCL 832

Query: 2260 SNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQ 2439
            SNRERLLLRKQAL +KKR VL++GKSN +TG+AKAIN HF+K+P A+VNVKGRA GTS+Q
Sbjct: 833  SNRERLLLRKQALTMKKRSVLSVGKSNSVTGIAKAINAHFRKYPLAVVNVKGRANGTSIQ 892

Query: 2440 EVVSELEQATGAVLVS 2487
            EVVS+LEQ TGAVLVS
Sbjct: 893  EVVSKLEQETGAVLVS 908


>KJB33714.1 hypothetical protein B456_006G027700 [Gossypium raimondii]
          Length = 998

 Score =  896 bits (2315), Expect = 0.0
 Identities = 491/871 (56%), Positives = 595/871 (68%), Gaps = 43/871 (4%)
 Frame = +1

Query: 4    GEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXXX 183
            GEIFVPLP +LPK RVGHTID SWSTPENPVP  G                         
Sbjct: 89   GEIFVPLPEKLPKYRVGHTIDSSWSTPENPVPDPG---------------------SDPG 127

Query: 184  XXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGI 363
                                      P++AEL L+ AE+ RLR +G G K+KLKVGKAGI
Sbjct: 128  SLMVRFRDMKRERKKMGRVKEEERVVPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGI 187

Query: 364  TEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGID 543
            TEGIVNGIHE WR  EVV+IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +
Sbjct: 188  TEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGAN 247

Query: 544  YKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPAL 723
            YKYPYF +DK+   +++ +A    + D+K  +E ES SSE N    +   +  K  K AL
Sbjct: 248  YKYPYFSADKIGTHDSSSNASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRAL 307

Query: 724  IQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRK 903
            IQGVG+P++VRFQLPGEAELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+
Sbjct: 308  IQGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRR 367

Query: 904  PFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIA 1083
            PFRLLPYGVKS LT+DEMTTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIA
Sbjct: 368  PFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIA 427

Query: 1084 VKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN- 1260
            VKRGVQNT+SE MAEE+K+LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V + 
Sbjct: 428  VKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHA 487

Query: 1261 ----------------KLKAENS-------SSDAVIKQRMFTKAEAALKRTSNKLSMXXX 1371
                            K+ +EN         SD    ++    AEA +KRTS+KLSM   
Sbjct: 488  ENQSGKTMQEVHGEGAKIASENDINSAKDRKSDVFSIRKNLNSAEATIKRTSSKLSMALE 547

Query: 1372 XXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVE 1551
                             P + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVE
Sbjct: 548  KKAKAEKLLAELEQEVIPQQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVE 607

Query: 1552 NMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYS 1731
            NMHLHWKYRELVKII K+ ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY 
Sbjct: 608  NMHLHWKYRELVKIISKETNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYE 667

Query: 1732 RPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMV-----KDEANSK 1896
            RP+ LRPQTLL K++A+KRS+E QR +SLKLH+LKL +NI+ELK Q+V     K+E  + 
Sbjct: 668  RPTCLRPQTLLTKREAMKRSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEAKEEMETL 727

Query: 1897 QIAEELRSDM----ATDRHEACSDSINCNSPKEASVDNQQAIQE-------QPVELIDSG 2043
            Q  +  RSD+    + + H    D     S K   +    +I E       +P  + D  
Sbjct: 728  QSVKCARSDIEYHASPEGHLEAKDKSESTSMKNDRMVAAVSISEPSEQVLVEPSSIHDGV 787

Query: 2044 GARQSEPESSAGLIHKEKQLDEVN--DSVVDTGHCVSNNKAME-XXXXXXXXXXXXXAPV 2214
               ++EPE S+  +++ K   E+    S  +      NN  ME              +P 
Sbjct: 788  ENHKTEPEFSSESVNRRKHNTELRALHSQFEMEENAYNNGPMESMVESASKNLDVLISPA 847

Query: 2215 IKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPF 2394
                SN++ ST+ +LSN+ERLLLRKQAL +KKRPVLA+G+SNI+TGVAK INTHF+KHP 
Sbjct: 848  ADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAKTINTHFKKHPL 907

Query: 2395 AIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            AIVNVKGRAKGTSVQEVV +L++ATGAVLVS
Sbjct: 908  AIVNVKGRAKGTSVQEVVLKLQEATGAVLVS 938


>XP_012483760.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Gossypium raimondii] KJB33715.1
            hypothetical protein B456_006G027700 [Gossypium
            raimondii]
          Length = 1012

 Score =  892 bits (2304), Expect = 0.0
 Identities = 493/885 (55%), Positives = 597/885 (67%), Gaps = 57/885 (6%)
 Frame = +1

Query: 4    GEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXXX 183
            GEIFVPLP +LPK RVGHTID SWSTPENPVP  G                         
Sbjct: 89   GEIFVPLPEKLPKYRVGHTIDSSWSTPENPVPDPG---------------------SDPG 127

Query: 184  XXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGI 363
                                      P++AEL L+ AE+ RLR +G G K+KLKVGKAGI
Sbjct: 128  SLMVRFRDMKRERKKMGRVKEEERVVPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGI 187

Query: 364  TEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGID 543
            TEGIVNGIHE WR  EVV+IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +
Sbjct: 188  TEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGAN 247

Query: 544  YKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPAL 723
            YKYPYF +DK+   +++ +A    + D+K  +E ES SSE N    +   +  K  K AL
Sbjct: 248  YKYPYFSADKIGTHDSSSNASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRAL 307

Query: 724  IQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRK 903
            IQGVG+P++VRFQLPGEAELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+
Sbjct: 308  IQGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRR 367

Query: 904  PFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIA 1083
            PFRLLPYGVKS LT+DEMTTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIA
Sbjct: 368  PFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIA 427

Query: 1084 VKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN- 1260
            VKRGVQNT+SE MAEE+K+LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V + 
Sbjct: 428  VKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHA 487

Query: 1261 ----------------KLKAENS-------SSDAVIKQRMFTKAEAALKRTSNKLSMXXX 1371
                            K+ +EN         SD    ++    AEA +KRTS+KLSM   
Sbjct: 488  ENQSGKTMQEVHGEGAKIASENDINSAKDRKSDVFSIRKNLNSAEATIKRTSSKLSMALE 547

Query: 1372 XXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVE 1551
                             P + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVE
Sbjct: 548  KKAKAEKLLAELEQEVIPQQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVE 607

Query: 1552 NMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYS 1731
            NMHLHWKYRELVKII K+ ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY 
Sbjct: 608  NMHLHWKYRELVKIISKETNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYE 667

Query: 1732 RPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKDEANSKQIA-- 1905
            RP+ LRPQTLL K++A+KRS+E QR +SLKLH+LKL +NI+ELK Q+V D+  S  +A  
Sbjct: 668  RPTCLRPQTLLTKREAMKRSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEASNTLAAD 727

Query: 1906 --------EEL---------RSDM----ATDRHEACSDSINCNSPKEASVDNQQAIQE-- 2016
                    EE+         RSD+    + + H    D     S K   +    +I E  
Sbjct: 728  QSRLPSVEEEMETLQSVKCARSDIEYHASPEGHLEAKDKSESTSMKNDRMVAAVSISEPS 787

Query: 2017 -----QPVELIDSGGARQSEPESSAGLIHKEKQLDEVN--DSVVDTGHCVSNNKAME-XX 2172
                 +P  + D     ++EPE S+  +++ K   E+    S  +      NN  ME   
Sbjct: 788  EQVLVEPSSIHDGVENHKTEPEFSSESVNRRKHNTELRALHSQFEMEENAYNNGPMESMV 847

Query: 2173 XXXXXXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTG 2352
                       +P     SN++ ST+ +LSN+ERLLLRKQAL +KKRPVLA+G+SNI+TG
Sbjct: 848  ESASKNLDVLISPAADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTG 907

Query: 2353 VAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            VAK INTHF+KHP AIVNVKGRAKGTSVQEVV +L++ATGAVLVS
Sbjct: 908  VAKTINTHFKKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVS 952


>XP_012483761.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Gossypium raimondii]
          Length = 1009

 Score =  891 bits (2303), Expect = 0.0
 Identities = 492/882 (55%), Positives = 596/882 (67%), Gaps = 54/882 (6%)
 Frame = +1

Query: 4    GEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXXX 183
            GEIFVPLP +LPK RVGHTID SWSTPENPVP  G                         
Sbjct: 89   GEIFVPLPEKLPKYRVGHTIDSSWSTPENPVPDPG---------------------SDPG 127

Query: 184  XXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGI 363
                                      P++AEL L+ AE+ RLR +G G K+KLKVGKAGI
Sbjct: 128  SLMVRFRDMKRERKKMGRVKEEERVVPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGI 187

Query: 364  TEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGID 543
            TEGIVNGIHE WR  EVV+IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +
Sbjct: 188  TEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGAN 247

Query: 544  YKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPAL 723
            YKYPYF +DK+   +++ +A    + D+K  +E ES SSE N    +   +  K  K AL
Sbjct: 248  YKYPYFSADKIGTHDSSSNASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRAL 307

Query: 724  IQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRK 903
            IQGVG+P++VRFQLPGEAELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+
Sbjct: 308  IQGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRR 367

Query: 904  PFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIA 1083
            PFRLLPYGVKS LT+DEMTTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIA
Sbjct: 368  PFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIA 427

Query: 1084 VKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN- 1260
            VKRGVQNT+SE MAEE+K+LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V + 
Sbjct: 428  VKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHA 487

Query: 1261 ----------------KLKAENS-------SSDAVIKQRMFTKAEAALKRTSNKLSMXXX 1371
                            K+ +EN         SD    ++    AEA +KRTS+KLSM   
Sbjct: 488  ENQSGKTMQEVHGEGAKIASENDINSAKDRKSDVFSIRKNLNSAEATIKRTSSKLSMALE 547

Query: 1372 XXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVE 1551
                             P + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVE
Sbjct: 548  KKAKAEKLLAELEQEVIPQQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVE 607

Query: 1552 NMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYS 1731
            NMHLHWKYRELVKII K+ ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY 
Sbjct: 608  NMHLHWKYRELVKIISKETNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYE 667

Query: 1732 RPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKD-----EANSK 1896
            RP+ LRPQTLL K++A+KRS+E QR +SLKLH+LKL +NI+ELK Q+V D     E  + 
Sbjct: 668  RPTCLRPQTLLTKREAMKRSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEVEEEMETL 727

Query: 1897 QIAEELRSDM----ATDRHEACSDSINCNSPKEASVDNQQAIQE-------QPVELIDSG 2043
            Q  +  RSD+    + + H    D     S K   +    +I E       +P  + D  
Sbjct: 728  QSVKCARSDIEYHASPEGHLEAKDKSESTSMKNDRMVAAVSISEPSEQVLVEPSSIHDGV 787

Query: 2044 GARQSEPESSAGLIHKEKQLDEVN------DSVVDTGH-------CVSNNKAME-XXXXX 2181
               ++EPE S+  +++ K   E+       + V  + H          NN  ME      
Sbjct: 788  ENHKTEPEFSSESVNRRKHNTELRALHSQFEMVESSSHHDNLMEENAYNNGPMESMVESA 847

Query: 2182 XXXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAK 2361
                    +P     SN++ ST+ +LSN+ERLLLRKQAL +KKRPVLA+G+SNI+TGVAK
Sbjct: 848  SKNLDVLISPAADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAK 907

Query: 2362 AINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
             INTHF+KHP AIVNVKGRAKGTSVQEVV +L++ATGAVLVS
Sbjct: 908  TINTHFKKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVS 949


>XP_016672839.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic-like
            isoform X3 [Gossypium hirsutum] XP_016672840.1 PREDICTED:
            CRM-domain containing factor CFM2, chloroplastic-like
            isoform X4 [Gossypium hirsutum]
          Length = 1012

 Score =  891 bits (2303), Expect = 0.0
 Identities = 493/885 (55%), Positives = 597/885 (67%), Gaps = 57/885 (6%)
 Frame = +1

Query: 4    GEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXXX 183
            GEIFVPLP +LPK RVGHTID SWSTPENPVP  G                         
Sbjct: 89   GEIFVPLPEKLPKYRVGHTIDTSWSTPENPVPDPG---------------------SDPG 127

Query: 184  XXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGI 363
                                      P++AEL L+ AE+ RLR +G G K+KLKVGKAGI
Sbjct: 128  SLMVRFRDMKRERKKMGRVKEEERVVPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGI 187

Query: 364  TEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGID 543
            TEGIVNGIHE WR  EVV+IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +
Sbjct: 188  TEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGAN 247

Query: 544  YKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPAL 723
            YKYPYF +DK+   +++ +A    + D+K  +E ES SSE N    +   +  K  K AL
Sbjct: 248  YKYPYFSADKIGTHDSSSNASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRAL 307

Query: 724  IQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRK 903
            I GVG+P++VRFQLPGEAELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+
Sbjct: 308  IHGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRR 367

Query: 904  PFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIA 1083
            PFRLLPYGVKS LT+DEMTTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIA
Sbjct: 368  PFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIA 427

Query: 1084 VKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN- 1260
            VKRGVQNT+SE MAEE+K+LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V + 
Sbjct: 428  VKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHA 487

Query: 1261 ----------------KLKAEN-------SSSDAVIKQRMFTKAEAALKRTSNKLSMXXX 1371
                            K+ +EN       S SD    ++    AEA +KRTS+KLSM   
Sbjct: 488  ENQSGKTMQEVHGEGAKIASENDINSAKDSKSDVFSVRKNLNSAEATIKRTSSKLSMALE 547

Query: 1372 XXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVE 1551
                             P + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVE
Sbjct: 548  KKAKAEKLLAELEQEVIPQQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVE 607

Query: 1552 NMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYS 1731
            NMHLHWKYRELVKII K+ ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY 
Sbjct: 608  NMHLHWKYRELVKIISKETNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYE 667

Query: 1732 RPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKDEANSKQIA-- 1905
            RP+ LRPQTLL K++A+KRS+E QR +SLKLH+LKL +NI+ELK Q+V D+  S  +A  
Sbjct: 668  RPTCLRPQTLLTKREAMKRSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEASNTLAAD 727

Query: 1906 --------EEL---------RSDM----ATDRHEACSDSINCNSPKEASVDNQQAIQE-- 2016
                    EE+         RSD+    + + H    D     S K   +    +I E  
Sbjct: 728  QSRLPSVEEEMETLQSVKCARSDIEYHASPEGHLEAKDKSESTSMKNDRMVAAVSISEPS 787

Query: 2017 -----QPVELIDSGGARQSEPESSAGLIHKEKQLDEVN--DSVVDTGHCVSNNKAME-XX 2172
                 +P  + D     ++EPE S+  +++ K   E+    S  +      NN  ME   
Sbjct: 788  EQVLVEPSSIHDGVENHKTEPEFSSESVNRRKHNTELRALHSQFEMEENAYNNGPMESMV 847

Query: 2173 XXXXXXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTG 2352
                       +P     SN++ ST+ +LSN+ERLLLRKQAL +KKRPVLA+G+SNI+TG
Sbjct: 848  ESASKNLDVLISPAADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTG 907

Query: 2353 VAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            VAK INTHF+KHP AIVNVKGRAKGTSVQEVV +L++ATGAVLVS
Sbjct: 908  VAKTINTHFKKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVS 952


>XP_016672841.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic-like
            isoform X5 [Gossypium hirsutum]
          Length = 1009

 Score =  891 bits (2302), Expect = 0.0
 Identities = 492/882 (55%), Positives = 596/882 (67%), Gaps = 54/882 (6%)
 Frame = +1

Query: 4    GEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXXX 183
            GEIFVPLP +LPK RVGHTID SWSTPENPVP  G                         
Sbjct: 89   GEIFVPLPEKLPKYRVGHTIDTSWSTPENPVPDPG---------------------SDPG 127

Query: 184  XXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGI 363
                                      P++AEL L+ AE+ RLR +G G K+KLKVGKAGI
Sbjct: 128  SLMVRFRDMKRERKKMGRVKEEERVVPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGI 187

Query: 364  TEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGID 543
            TEGIVNGIHE WR  EVV+IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +
Sbjct: 188  TEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGAN 247

Query: 544  YKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPAL 723
            YKYPYF +DK+   +++ +A    + D+K  +E ES SSE N    +   +  K  K AL
Sbjct: 248  YKYPYFSADKIGTHDSSSNASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRAL 307

Query: 724  IQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRK 903
            I GVG+P++VRFQLPGEAELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+
Sbjct: 308  IHGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRR 367

Query: 904  PFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIA 1083
            PFRLLPYGVKS LT+DEMTTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIA
Sbjct: 368  PFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIA 427

Query: 1084 VKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN- 1260
            VKRGVQNT+SE MAEE+K+LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V + 
Sbjct: 428  VKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHA 487

Query: 1261 ----------------KLKAEN-------SSSDAVIKQRMFTKAEAALKRTSNKLSMXXX 1371
                            K+ +EN       S SD    ++    AEA +KRTS+KLSM   
Sbjct: 488  ENQSGKTMQEVHGEGAKIASENDINSAKDSKSDVFSVRKNLNSAEATIKRTSSKLSMALE 547

Query: 1372 XXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVE 1551
                             P + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVE
Sbjct: 548  KKAKAEKLLAELEQEVIPQQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVE 607

Query: 1552 NMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYS 1731
            NMHLHWKYRELVKII K+ ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY 
Sbjct: 608  NMHLHWKYRELVKIISKETNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYE 667

Query: 1732 RPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKD-----EANSK 1896
            RP+ LRPQTLL K++A+KRS+E QR +SLKLH+LKL +NI+ELK Q+V D     E  + 
Sbjct: 668  RPTCLRPQTLLTKREAMKRSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEVEEEMETL 727

Query: 1897 QIAEELRSDM----ATDRHEACSDSINCNSPKEASVDNQQAIQE-------QPVELIDSG 2043
            Q  +  RSD+    + + H    D     S K   +    +I E       +P  + D  
Sbjct: 728  QSVKCARSDIEYHASPEGHLEAKDKSESTSMKNDRMVAAVSISEPSEQVLVEPSSIHDGV 787

Query: 2044 GARQSEPESSAGLIHKEKQLDEVN------DSVVDTGH-------CVSNNKAME-XXXXX 2181
               ++EPE S+  +++ K   E+       + V  + H          NN  ME      
Sbjct: 788  ENHKTEPEFSSESVNRRKHNTELRALHSQFEMVESSSHHDNLMEENAYNNGPMESMVESA 847

Query: 2182 XXXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMTGVAK 2361
                    +P     SN++ ST+ +LSN+ERLLLRKQAL +KKRPVLA+G+SNI+TGVAK
Sbjct: 848  SKNLDVLISPAADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAK 907

Query: 2362 AINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
             INTHF+KHP AIVNVKGRAKGTSVQEVV +L++ATGAVLVS
Sbjct: 908  TINTHFKKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVS 949


>EOY02282.1 CRM family member 2, putative isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  891 bits (2302), Expect = 0.0
 Identities = 492/915 (53%), Positives = 609/915 (66%), Gaps = 87/915 (9%)
 Frame = +1

Query: 4    GEIFVPLPHQLPKQRVGHTIDQSWSTPENPVP--GKGFAALXXXXXXXXXXXXXXXXXXX 177
            GEIFVPLP ++PK RVGHTID SWSTPENPVP  G G  +L                   
Sbjct: 94   GEIFVPLPEKIPKYRVGHTIDTSWSTPENPVPDPGSGPGSLMARFREMKRERRKVGRVKE 153

Query: 178  XXXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKA 357
                                        P++AEL L+ AE+ RLR +G G K+KLK+GKA
Sbjct: 154  EDRA-----------------------VPSLAELKLSAAELRRLRTVGIGEKRKLKLGKA 190

Query: 358  GITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRG 537
            GITEGIVNGIHE WR  EVVKIVCED+C+ NMKRTH++LERKTGGLVVWRSGSKIILYRG
Sbjct: 191  GITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLERKTGGLVVWRSGSKIILYRG 250

Query: 538  IDYKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKP 717
             +Y+YPYFL+DK+  D+ + +A    + D+   +E ES SSE+NSA  A  N+  K  KP
Sbjct: 251  ANYRYPYFLADKIATDDTSSNASPDTNMDNVELHETESCSSEINSAKTAIPNATNKMTKP 310

Query: 718  ALIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGF 897
             ++QGVG+P++VRFQLPGEAELVE+A+ LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+
Sbjct: 311  MIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGY 370

Query: 898  RKPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVK 1077
            R+PFRLLPYGVK  LT+DEMTTLRRLGRPLP HF LGRN KLQGLAA+I+K WE+CEI K
Sbjct: 371  RRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAASIVKHWEKCEIAK 430

Query: 1078 IAVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVT 1257
            +AVKRGVQNT+SE MAEE+K+LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V 
Sbjct: 431  VAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRRHVI 490

Query: 1258 N--KLKAENSSSDAVIKQ----------------------------RMFTKAEAALKRTS 1347
            +  K  AE S S    ++                            +    AEAA+++T 
Sbjct: 491  HVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSAKDQRSNFFGDPKNMKSAEAAIRKTD 550

Query: 1348 NKLSMXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRR 1527
             KLSM                    P + EI KEGIT+EERYMLRK+GL+M PFLLLGRR
Sbjct: 551  VKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRR 610

Query: 1528 GVFDGTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAII 1707
            GVFDGTVENMHLHWKYRELVKII K+ ++E+VHQ+AR LEAESGGILVAVERV+KGYAII
Sbjct: 611  GVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAII 670

Query: 1708 VYRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKD-E 1884
            VYRGKNY RP++LRPQTLL K+QA+KRS+E QR +SLKLH+L L +N+N+L+ Q+V D E
Sbjct: 671  VYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQLVVDKE 730

Query: 1885 ANSKQIAEELRSDMATDRHEACSDS------INCNSPKEASVDN---------------- 1998
            ANS Q  E+    +  +  E           I C +     V++                
Sbjct: 731  ANSMQTVEQSSLPLVQEELETLQSVEYTGSVIECPASSGGHVESRDKDGSESTSMKNDKM 790

Query: 1999 -------QQAIQE--QPVELIDSGGARQSEPESSAGLIHKEKQ----------------- 2100
                   Q + QE  +P  + D     ++E E SA  ++++                   
Sbjct: 791  VATISIRQPSKQEFMEPSSIHDGFENHKTESEFSAESVNRKSHATELRALHTQVEMVDTS 850

Query: 2101 -----LDEVNDS-VVDTGHCVSNNKAMEXXXXXXXXXXXXXAPVIKGSSNELPSTSLYLS 2262
                 ++E++DS  ++  H VSNN  ME             +  ++  SN++ ST+ +LS
Sbjct: 851  YPDNLMEEIDDSGAINAEHGVSNNGPMESLVESASMLDVSISSAVENVSNKMASTANFLS 910

Query: 2263 NRERLLLRKQALKIKKRPVLAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQE 2442
            N++RLLLRKQALK+KKRPVLA+G+SNI+TGVAKAI  HFQKHP AIVNVKGRAKGTSVQE
Sbjct: 911  NKDRLLLRKQALKMKKRPVLAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQE 970

Query: 2443 VVSELEQATGAVLVS 2487
            VV +L++ATGAVLVS
Sbjct: 971  VVLKLQEATGAVLVS 985


>CBI34982.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1028

 Score =  889 bits (2297), Expect = 0.0
 Identities = 496/886 (55%), Positives = 599/886 (67%), Gaps = 57/886 (6%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXX 180
            AGEIFVPLP+QLPK RVGHTIDQSWS PENPVP  G   +                    
Sbjct: 114  AGEIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRK 173

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAG 360
                                      APT+AEL+L E E+ RL+ +G  ++KKLKVGKAG
Sbjct: 174  EDE----------------------RAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAG 211

Query: 361  ITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGI 540
            ITEGIVNGIHE WR  EVVKI CED+C+ NMKRTHD+LERKTGGLV+WRSGS IILYRG 
Sbjct: 212  ITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGA 271

Query: 541  DYKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPA 720
            +YKYPYFLSD  L ++++ DA      +++  + KE  SS       AG     K A  +
Sbjct: 272  NYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLS 331

Query: 721  LIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFR 900
            LIQGVG P +VRFQLPGEA+L E+AD+LL+GLGP+FTDWWGYDPLP+DADLLPAV+PG+R
Sbjct: 332  LIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYR 391

Query: 901  KPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKI 1080
            +PFRLLPYG+K KLT+DEMT LRRLGRPLP HFALGRN KLQGLAA++IKLWE+CEI KI
Sbjct: 392  RPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKI 451

Query: 1081 AVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRR----- 1245
            AVKRGVQNT+SE MAEE+K LTGGTLLSR+ EFIVFYRGKDFLP AVSSAIE RR     
Sbjct: 452  AVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIH 511

Query: 1246 -------------NIVTNKLKAENSSSD------------AVIKQRMFTKAEAALKRTSN 1350
                         N   ++L     +SD            ++ K+RM   AEA ++RT+ 
Sbjct: 512  RGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNI 571

Query: 1351 KLSMXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRG 1530
            KLSM                    P + EI KEGITEEERYMLRK+GL+M PFLLLGRRG
Sbjct: 572  KLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRG 631

Query: 1531 VFDGTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIV 1710
            +FDGTVENMHLHWKYRELVKII    S+E +H +ARTLEAESGGILVAVERV+KGYAII+
Sbjct: 632  IFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIM 691

Query: 1711 YRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMV---KD 1881
            YRGKNY RP++LRPQTLLNK++ALKRS+EAQR ESLKLHVL+L +NI+ELK Q+V   KD
Sbjct: 692  YRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKD 751

Query: 1882 -EANSKQIAEELRSDMATDRHEACSDSINCNSPKEASVDNQQAIQEQP----VELIDSGG 2046
             E NSKQ+ ++ R  +A +R+ A    I+ +   ++S D+ Q            + DS  
Sbjct: 752  KETNSKQLVDKSRLHLARERYGADVILIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDS-D 810

Query: 2047 ARQSEPESSAGLIHKEKQLDEVNDSVVDTGHC------------------VSNNKAMEXX 2172
              ++ PE S+  + KE + + + D + + G C                  V++ + ME  
Sbjct: 811  TDEANPEPSSESVLKEIETNVLTD-MNEEGECTTCSEDLVSQGETSCYAIVNHEETMESS 869

Query: 2173 XXXXXXXXXXXAP-VIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMT 2349
                           +   SNE+P  +  LSNRERLLLRKQAL++KKRPV+A+G+SNI+T
Sbjct: 870  VKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVT 929

Query: 2350 GVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            GVAK I  HFQKHP AIVNVKGRAKGTSVQEV+ +LEQATGAVLVS
Sbjct: 930  GVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVS 975


>XP_012483758.1 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Gossypium raimondii] KJB33712.1
            hypothetical protein B456_006G027700 [Gossypium
            raimondii]
          Length = 1023

 Score =  888 bits (2295), Expect = 0.0
 Identities = 494/896 (55%), Positives = 599/896 (66%), Gaps = 68/896 (7%)
 Frame = +1

Query: 4    GEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXXX 183
            GEIFVPLP +LPK RVGHTID SWSTPENPVP  G                         
Sbjct: 89   GEIFVPLPEKLPKYRVGHTIDSSWSTPENPVPDPG---------------------SDPG 127

Query: 184  XXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGI 363
                                      P++AEL L+ AE+ RLR +G G K+KLKVGKAGI
Sbjct: 128  SLMVRFRDMKRERKKMGRVKEEERVVPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGI 187

Query: 364  TEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGID 543
            TEGIVNGIHE WR  EVV+IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +
Sbjct: 188  TEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGAN 247

Query: 544  YKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPAL 723
            YKYPYF +DK+   +++ +A    + D+K  +E ES SSE N    +   +  K  K AL
Sbjct: 248  YKYPYFSADKIGTHDSSSNASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRAL 307

Query: 724  IQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRK 903
            IQGVG+P++VRFQLPGEAELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+
Sbjct: 308  IQGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRR 367

Query: 904  PFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIA 1083
            PFRLLPYGVKS LT+DEMTTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIA
Sbjct: 368  PFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIA 427

Query: 1084 VKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN- 1260
            VKRGVQNT+SE MAEE+K+LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V + 
Sbjct: 428  VKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHA 487

Query: 1261 ----------------KLKAENS-------SSDAVIKQRMFTKAEAALKRTSNKLSMXXX 1371
                            K+ +EN         SD    ++    AEA +KRTS+KLSM   
Sbjct: 488  ENQSGKTMQEVHGEGAKIASENDINSAKDRKSDVFSIRKNLNSAEATIKRTSSKLSMALE 547

Query: 1372 XXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVE 1551
                             P + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVE
Sbjct: 548  KKAKAEKLLAELEQEVIPQQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVE 607

Query: 1552 NMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYS 1731
            NMHLHWKYRELVKII K+ ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY 
Sbjct: 608  NMHLHWKYRELVKIISKETNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYE 667

Query: 1732 RPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKDEANSKQIA-- 1905
            RP+ LRPQTLL K++A+KRS+E QR +SLKLH+LKL +NI+ELK Q+V D+  S  +A  
Sbjct: 668  RPTCLRPQTLLTKREAMKRSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEASNTLAAD 727

Query: 1906 --------EEL---------RSDM----ATDRHEACSDSINCNSPKEASVDNQQAIQE-- 2016
                    EE+         RSD+    + + H    D     S K   +    +I E  
Sbjct: 728  QSRLPSVEEEMETLQSVKCARSDIEYHASPEGHLEAKDKSESTSMKNDRMVAAVSISEPS 787

Query: 2017 -----QPVELIDSGGARQSEPESSAGLIHKEKQLDEVN------DSVVDTGH-------C 2142
                 +P  + D     ++EPE S+  +++ K   E+       + V  + H        
Sbjct: 788  EQVLVEPSSIHDGVENHKTEPEFSSESVNRRKHNTELRALHSQFEMVESSSHHDNLMEEN 847

Query: 2143 VSNNKAME-XXXXXXXXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPV 2319
              NN  ME              +P     SN++ ST+ +LSN+ERLLLRKQAL +KKRPV
Sbjct: 848  AYNNGPMESMVESASKNLDVLISPAADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPV 907

Query: 2320 LAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            LA+G+SNI+TGVAK INTHF+KHP AIVNVKGRAKGTSVQEVV +L++ATGAVLVS
Sbjct: 908  LAVGRSNIVTGVAKTINTHFKKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVS 963


>XP_002275511.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X1 [Vitis vinifera] XP_010660972.1 PREDICTED: CRM-domain
            containing factor CFM2, chloroplastic isoform X1 [Vitis
            vinifera]
          Length = 1044

 Score =  889 bits (2297), Expect = 0.0
 Identities = 496/886 (55%), Positives = 599/886 (67%), Gaps = 57/886 (6%)
 Frame = +1

Query: 1    AGEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXX 180
            AGEIFVPLP+QLPK RVGHTIDQSWS PENPVP  G   +                    
Sbjct: 114  AGEIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLVRK 173

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAG 360
                                      APT+AEL+L E E+ RL+ +G  ++KKLKVGKAG
Sbjct: 174  EDE----------------------RAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAG 211

Query: 361  ITEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGI 540
            ITEGIVNGIHE WR  EVVKI CED+C+ NMKRTHD+LERKTGGLV+WRSGS IILYRG 
Sbjct: 212  ITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGA 271

Query: 541  DYKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPA 720
            +YKYPYFLSD  L ++++ DA      +++  + KE  SS       AG     K A  +
Sbjct: 272  NYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLS 331

Query: 721  LIQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFR 900
            LIQGVG P +VRFQLPGEA+L E+AD+LL+GLGP+FTDWWGYDPLP+DADLLPAV+PG+R
Sbjct: 332  LIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYR 391

Query: 901  KPFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKI 1080
            +PFRLLPYG+K KLT+DEMT LRRLGRPLP HFALGRN KLQGLAA++IKLWE+CEI KI
Sbjct: 392  RPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKI 451

Query: 1081 AVKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRR----- 1245
            AVKRGVQNT+SE MAEE+K LTGGTLLSR+ EFIVFYRGKDFLP AVSSAIE RR     
Sbjct: 452  AVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIH 511

Query: 1246 -------------NIVTNKLKAENSSSD------------AVIKQRMFTKAEAALKRTSN 1350
                         N   ++L     +SD            ++ K+RM   AEA ++RT+ 
Sbjct: 512  RGKQKIDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNI 571

Query: 1351 KLSMXXXXXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRG 1530
            KLSM                    P + EI KEGITEEERYMLRK+GL+M PFLLLGRRG
Sbjct: 572  KLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRG 631

Query: 1531 VFDGTVENMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIV 1710
            +FDGTVENMHLHWKYRELVKII    S+E +H +ARTLEAESGGILVAVERV+KGYAII+
Sbjct: 632  IFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIM 691

Query: 1711 YRGKNYSRPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMV---KD 1881
            YRGKNY RP++LRPQTLLNK++ALKRS+EAQR ESLKLHVL+L +NI+ELK Q+V   KD
Sbjct: 692  YRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLVSRIKD 751

Query: 1882 -EANSKQIAEELRSDMATDRHEACSDSINCNSPKEASVDNQQAIQEQP----VELIDSGG 2046
             E NSKQ+ ++ R  +A +R+ A    I+ +   ++S D+ Q            + DS  
Sbjct: 752  KETNSKQLVDKSRLHLARERYGADVILIHSSDGMDSSRDSLQTSHNDKRIDFPSMCDS-D 810

Query: 2047 ARQSEPESSAGLIHKEKQLDEVNDSVVDTGHC------------------VSNNKAMEXX 2172
              ++ PE S+  + KE + + + D + + G C                  V++ + ME  
Sbjct: 811  TDEANPEPSSESVLKEIETNVLTD-MNEEGECTTCSEDLVSQGETSCYAIVNHEETMESS 869

Query: 2173 XXXXXXXXXXXAP-VIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPVLAIGKSNIMT 2349
                           +   SNE+P  +  LSNRERLLLRKQAL++KKRPV+A+G+SNI+T
Sbjct: 870  VKSSKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVT 929

Query: 2350 GVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            GVAK I  HFQKHP AIVNVKGRAKGTSVQEV+ +LEQATGAVLVS
Sbjct: 930  GVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVS 975


>XP_016672837.1 PREDICTED: CRM-domain containing factor CFM2, chloroplastic-like
            isoform X1 [Gossypium hirsutum] XP_016672838.1 PREDICTED:
            CRM-domain containing factor CFM2, chloroplastic-like
            isoform X2 [Gossypium hirsutum]
          Length = 1023

 Score =  888 bits (2294), Expect = 0.0
 Identities = 494/896 (55%), Positives = 599/896 (66%), Gaps = 68/896 (7%)
 Frame = +1

Query: 4    GEIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALXXXXXXXXXXXXXXXXXXXXX 183
            GEIFVPLP +LPK RVGHTID SWSTPENPVP  G                         
Sbjct: 89   GEIFVPLPEKLPKYRVGHTIDTSWSTPENPVPDPG---------------------SDPG 127

Query: 184  XXXXXXXXXXXXXXXXXXXXXXXVEAPTVAELSLTEAEIMRLRKLGFGMKKKLKVGKAGI 363
                                      P++AEL L+ AE+ RLR +G G K+KLKVGKAGI
Sbjct: 128  SLMVRFRDMKRERKKMGRVKEEERVVPSLAELKLSAAELKRLRTVGIGEKRKLKVGKAGI 187

Query: 364  TEGIVNGIHEWWRSHEVVKIVCEDLCRTNMKRTHDLLERKTGGLVVWRSGSKIILYRGID 543
            TEGIVNGIHE WR  EVV+IVCED+C+ NMKRTH++LERKTGGLV+WRSGSKIILYRG +
Sbjct: 188  TEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLERKTGGLVIWRSGSKIILYRGAN 247

Query: 544  YKYPYFLSDKVLRDENNGDAMQHMDGDDKNCNEKESHSSEMNSATHAGQNSNFKTAKPAL 723
            YKYPYF +DK+   +++ +A    + D+K  +E ES SSE N    +   +  K  K AL
Sbjct: 248  YKYPYFSADKIGTHDSSSNASSDTNVDNKELDETESCSSEFNGVKTSTPKATDKMTKRAL 307

Query: 724  IQGVGTPNKVRFQLPGEAELVEDADKLLEGLGPQFTDWWGYDPLPVDADLLPAVIPGFRK 903
            I GVG+P++VRFQLPGEAELV +AD+LL+GLGP+FTDWWGY+PLPVD DLLPA+IPG+R+
Sbjct: 308  IHGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRR 367

Query: 904  PFRLLPYGVKSKLTDDEMTTLRRLGRPLPSHFALGRNMKLQGLAAAIIKLWERCEIVKIA 1083
            PFRLLPYGVKS LT+DEMTTLRRLGRPLP HFALGRN KLQGLAA+IIKLWE+CEI KIA
Sbjct: 368  PFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRKLQGLAASIIKLWEKCEIAKIA 427

Query: 1084 VKRGVQNTDSETMAEEIKYLTGGTLLSRNNEFIVFYRGKDFLPAAVSSAIEQRRNIVTN- 1260
            VKRGVQNT+SE MAEE+K+LTGGTLLSR+ +FIV YRGKDFLP+AVSSAIE+RR  V + 
Sbjct: 428  VKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRKHVIHA 487

Query: 1261 ----------------KLKAEN-------SSSDAVIKQRMFTKAEAALKRTSNKLSMXXX 1371
                            K+ +EN       S SD    ++    AEA +KRTS+KLSM   
Sbjct: 488  ENQSGKTMQEVHGEGAKIASENDINSAKDSKSDVFSVRKNLNSAEATIKRTSSKLSMALE 547

Query: 1372 XXXXXXXXXXXXXXXXXPPEQEIVKEGITEEERYMLRKIGLKMSPFLLLGRRGVFDGTVE 1551
                             P + EI KEGIT EERYMLRK+GL+M PFLLLGRRGVFDGTVE
Sbjct: 548  KKAKAEKLLAELEQEVIPQQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVE 607

Query: 1552 NMHLHWKYRELVKIICKQGSLESVHQIARTLEAESGGILVAVERVNKGYAIIVYRGKNYS 1731
            NMHLHWKYRELVKII K+ ++E+VHQ A+ LEAESGGILVAVERV+KGYAII YRGKNY 
Sbjct: 608  NMHLHWKYRELVKIISKETNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYE 667

Query: 1732 RPSTLRPQTLLNKKQALKRSIEAQRCESLKLHVLKLDKNINELKRQMVKDEANSKQIA-- 1905
            RP+ LRPQTLL K++A+KRS+E QR +SLKLH+LKL +NI+ELK Q+V D+  S  +A  
Sbjct: 668  RPTCLRPQTLLTKREAMKRSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEASNTLAAD 727

Query: 1906 --------EEL---------RSDM----ATDRHEACSDSINCNSPKEASVDNQQAIQE-- 2016
                    EE+         RSD+    + + H    D     S K   +    +I E  
Sbjct: 728  QSRLPSVEEEMETLQSVKCARSDIEYHASPEGHLEAKDKSESTSMKNDRMVAAVSISEPS 787

Query: 2017 -----QPVELIDSGGARQSEPESSAGLIHKEKQLDEVN------DSVVDTGH-------C 2142
                 +P  + D     ++EPE S+  +++ K   E+       + V  + H        
Sbjct: 788  EQVLVEPSSIHDGVENHKTEPEFSSESVNRRKHNTELRALHSQFEMVESSSHHDNLMEEN 847

Query: 2143 VSNNKAME-XXXXXXXXXXXXXAPVIKGSSNELPSTSLYLSNRERLLLRKQALKIKKRPV 2319
              NN  ME              +P     SN++ ST+ +LSN+ERLLLRKQAL +KKRPV
Sbjct: 848  AYNNGPMESMVESASKNLDVLISPAADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPV 907

Query: 2320 LAIGKSNIMTGVAKAINTHFQKHPFAIVNVKGRAKGTSVQEVVSELEQATGAVLVS 2487
            LA+G+SNI+TGVAK INTHF+KHP AIVNVKGRAKGTSVQEVV +L++ATGAVLVS
Sbjct: 908  LAVGRSNIVTGVAKTINTHFKKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVS 963