BLASTX nr result

ID: Glycyrrhiza29_contig00041452 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00041452
         (220 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003593962.1 transcription termination factor family protein [...    55   6e-07
XP_003593965.2 transcription termination factor family protein [...    52   5e-06
KYP62877.1 hypothetical protein KK1_017436 [Cajanus cajan]             51   9e-06
XP_006597531.1 PREDICTED: transcription termination factor 1, mi...    51   9e-06

>XP_003593962.1 transcription termination factor family protein [Medicago
           truncatula] AES64213.1 transcription termination factor
           family protein [Medicago truncatula]
          Length = 366

 Score = 54.7 bits (130), Expect = 6e-07
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -2

Query: 114 SSSHDERISFTTNYLVNNCGLSPETASKLSSRVRLSNS 1
           SSS  +  SFT NYL+ NCG SPETASKLS RV L+NS
Sbjct: 24  SSSSSQNHSFTVNYLIQNCGFSPETASKLSKRVLLNNS 61


>XP_003593965.2 transcription termination factor family protein [Medicago
           truncatula] AES64216.2 transcription termination factor
           family protein [Medicago truncatula]
          Length = 385

 Score = 52.0 bits (123), Expect = 5e-06
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -2

Query: 126 QRFCSSSHDERISFTTNYLVNNCGLSPETASKLSSRVRLSNS 1
           Q F SS+  ++ SFT NYL+ N G SP+TASKLS R++L+NS
Sbjct: 32  QPFSSSTKQQQHSFTVNYLIQNLGFSPQTASKLSKRLQLNNS 73


>KYP62877.1 hypothetical protein KK1_017436 [Cajanus cajan]
          Length = 361

 Score = 51.2 bits (121), Expect = 9e-06
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = -2

Query: 126 QRFCSSSHDERISFTTNYLVNNCGLSPETASKLSSRVRLSNS 1
           Q F SS+  E  SFT  YL+NNCG  P+TAS LS+R+RLS+S
Sbjct: 24  QSFTSSAQQEAHSFTYAYLLNNCGFPPKTASHLSTRLRLSSS 65


>XP_006597531.1 PREDICTED: transcription termination factor 1, mitochondrial-like
           [Glycine max] KRH11208.1 hypothetical protein
           GLYMA_15G095800 [Glycine max]
          Length = 381

 Score = 51.2 bits (121), Expect = 9e-06
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -2

Query: 114 SSSHDERISFTTNYLVNNCGLSPETASKLSSRVRLSNS 1
           SS H ++ SFT NYL+N  G SPETASKLS+R+RL  S
Sbjct: 37  SSDHKQQHSFTLNYLLNTFGFSPETASKLSTRIRLETS 74


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