BLASTX nr result

ID: Glycyrrhiza29_contig00040847 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00040847
         (380 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum]   108   3e-25
GAU36816.1 hypothetical protein TSUD_219190 [Trifolium subterran...   108   4e-25
KYP42324.1 Putative ribonuclease H protein At1g65750 family [Caj...    79   2e-14
GAU40905.1 hypothetical protein TSUD_297100 [Trifolium subterran...    74   2e-13
KYP71397.1 Putative ribonuclease H protein At1g65750 family, par...    75   2e-13
GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum]    75   3e-13
KYP64774.1 Putative ribonuclease H protein At1g65750 family, par...    75   3e-13
XP_015389227.1 PREDICTED: putative ribonuclease H protein At1g65...    74   8e-13
KYP72596.1 Putative ribonuclease H protein At1g65750 family [Caj...    72   4e-12
KYP63873.1 Putative ribonuclease H protein At1g65750 family [Caj...    71   6e-12
KYP65965.1 Putative ribonuclease H protein At1g65750 family [Caj...    71   6e-12
EOX93148.1 Uncharacterized protein TCM_001997 [Theobroma cacao]        71   8e-12
KYP62996.1 Putative ribonuclease H protein At1g65750 family [Caj...    70   2e-11
XP_010520746.1 PREDICTED: uncharacterized protein LOC104799794 [...    69   3e-11
KYP37594.1 Putative ribonuclease H protein At1g65750 family, par...    69   3e-11
GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran...    69   3e-11
XP_009344908.1 PREDICTED: uncharacterized protein LOC103936764 [...    69   3e-11
KYP73874.1 Putative ribonuclease H protein At1g65750 family [Caj...    69   4e-11
KYP71696.1 Putative ribonuclease H protein At1g65750 family [Caj...    69   4e-11
OMO73242.1 reverse transcriptase [Corchorus capsularis]                69   4e-11

>GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum]
          Length = 482

 Score =  108 bits (270), Expect = 3e-25
 Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = -2

Query: 370 WVPYVAPLADHALHPIQPHEWHLTVHNYASNGAWNWDVLHQILPYDICCKIAGIKAPCAG 191
           W+P V  L DH    I   E +  V++YAS+G W WD +  I+P DIC KIA IK P  G
Sbjct: 81  WIPNVGALEDHIAASIPREELNFPVNHYASDGLWKWDKIRSIVPNDICDKIAVIKPPSQG 140

Query: 190 IEDFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFP-FQLLWKIPTPPRVNTFLWRVVHN 14
             DFP W+   DG+FS+K+AY  +    Q D  + P F+ +W    P R+  FLW++   
Sbjct: 141 APDFPCWKLSIDGYFSLKTAYEFMENQHQEDLYINPIFEKVWHWKGPNRIKAFLWKLSQG 200

Query: 13  RLMT 2
           RL+T
Sbjct: 201 RLLT 204


>GAU36816.1 hypothetical protein TSUD_219190 [Trifolium subterraneum]
          Length = 521

 Score =  108 bits (270), Expect = 4e-25
 Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = -2

Query: 370 WVPYVAPLADHALHPIQPHEWHLTVHNYASNGAWNWDVLHQILPYDICCKIAGIKAPCAG 191
           W+P V  L DH    I   E +  V++YAS+G W WD +  I+P DIC KIA IK P  G
Sbjct: 250 WIPNVGALEDHIAASIPREELNFPVNHYASDGLWKWDKIRSIVPNDICDKIAVIKPPSQG 309

Query: 190 IEDFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFP-FQLLWKIPTPPRVNTFLWRVVHN 14
             DFP W+   DG+FS+K+AY  +    Q D  + P F+ +W    P R+  FLW++   
Sbjct: 310 APDFPCWKLSVDGYFSLKTAYEFMENQHQEDLYINPIFEKVWHWKGPNRIKAFLWKLSQG 369

Query: 13  RLMT 2
           RL+T
Sbjct: 370 RLLT 373


>KYP42324.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1443

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
 Frame = -2

Query: 376  DSWVPYVAPLADHALHPIQPHEWHLTVHNYA-SNGAWNWDVLHQILPYDICCKIAGIKAP 200
            DSW+P    L    L P+  ++    V +Y   +G WN D +  +LP  I  +I G   P
Sbjct: 1020 DSWLPSRVILEKVILSPVPENDKKKVVSDYIHDDGNWNIDDIRSVLPGQIWWEIMGTAPP 1079

Query: 199  CAGIE-DFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFP-FQLLWKIPTPPRVNTFLWR 26
                + D  +WR  +DG FS+KSAY  L    Q DHL    F+++WK P P RV  FLWR
Sbjct: 1080 SPENDTDCMVWRESTDGSFSIKSAYNALRT--QSDHLNHQLFKMVWKWPGPERVRCFLWR 1137

Query: 25   VVHNRLMT 2
            + H  L T
Sbjct: 1138 LAHKSLCT 1145


>GAU40905.1 hypothetical protein TSUD_297100 [Trifolium subterraneum]
          Length = 264

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
 Frame = -2

Query: 271 WNWDVLHQILPYDICCKIAGIKAPCAGIE-DFPIWRHFSDGFFSVKSAYLHLY--KDLQR 101
           W W+VL+Q+ P D+  KIA IK P   ++ DFP W    DG FS  SAY  L   K +++
Sbjct: 45  WKWEVLNQLFPDDVRTKIAAIKPPSIEMQSDFPNWSASPDGKFSRNSAYSLLMDKKPIEK 104

Query: 100 --DHLVFPFQLLWKIPTPPRVNTFLWRVVHNRLMT 2
              HL   F+L+WK   P R+ +FLW+V H RLMT
Sbjct: 105 TDSHL---FKLVWKWKGPNRIPSFLWKVAHCRLMT 136


>KYP71397.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 510

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
 Frame = -2

Query: 376 DSWVPYVAPLADHALHPIQPHEWHLTVHNYASN-GAWNWDVLHQILPYDICCKIAGIKAP 200
           D WVP +  L   A+H +   E +  V +Y    G WN   +  +LP DI   I G  AP
Sbjct: 174 DHWVPSIPKLISEAVHFVPMQEINKHVADYVDQFGEWNLSSIEHLLPPDIFNVILGQPAP 233

Query: 199 -CAGIEDFPIWRHFSDGFFSVKSAYLHL-YKDLQRDHLVFPFQLLWKIPTPPRVNTFLWR 26
             +  +D   W++ +DG FS+K  Y  L   D+     VF  +LLW    P R+ TFLWR
Sbjct: 234 GLSSDKDVLAWKNAADGEFSLKKGYEFLCLADVSSRQKVF--KLLWNWRGPERIRTFLWR 291

Query: 25  VVHNRLMT 2
           + HN L+T
Sbjct: 292 LAHNSLLT 299


>GAU38761.1 hypothetical protein TSUD_64920 [Trifolium subterraneum]
          Length = 533

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = -2

Query: 370 WVPYVAPLADHALHPIQPHEWHLTVHNYASNGAWNWDVLHQILPYDICCKIAGIKAPCAG 191
           W+P V  L DH    I   E +  V+NYAS+G W WD +  I+P DIC KIA IK P  G
Sbjct: 287 WIPNVGALEDHIAASIPKEELNFPVNNYASDGLWKWDKIRSIVPNDICDKIAVIKPPSQG 346

Query: 190 IEDFPIWR 167
             DFP W+
Sbjct: 347 APDFPCWK 354


>KYP64774.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 930

 Score = 75.1 bits (183), Expect = 3e-13
 Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
 Frame = -2

Query: 379 QDSWVPYVAPLADHALHPIQPHEWHLTVHNYAS-NGAWNWDVLHQILPYDICCKIAGIKA 203
           +D+W+P V PL    +  +   + +  V +  + NG WN+  L  +LP +IC  I+ I  
Sbjct: 587 KDNWIPTVGPLRHKVISSLSEQQLNWKVRDMVTENGHWNYIGLLSVLPLNICNIISTISP 646

Query: 202 PCAGIE-DFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFP-----FQLLWKIPTPPRVN 41
           P    + D  +W+   DG FSVKSA       L   +L  P     F+L+WK P   R+ 
Sbjct: 647 PNMSCKPDCLLWKPSHDGIFSVKSAI----SSLSAHNLTPPQHPQVFKLIWKWPGLQRIR 702

Query: 40  TFLWRVVHNRLMT 2
             LWR++HN L+T
Sbjct: 703 LLLWRILHNALLT 715


>XP_015389227.1 PREDICTED: putative ribonuclease H protein At1g65750 [Citrus
           sinensis]
          Length = 427

 Score = 73.6 bits (179), Expect = 8e-13
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
 Frame = -2

Query: 376 DSWVPYVAPLADHALHPIQPHE-WHLTVHNYASNGAWNWDVLHQILPYDICCKIAGIKAP 200
           D WV    PL+ +AL PI      +L V    +NG W+WD    +LP  I  +IA ++ P
Sbjct: 134 DCWVTKHKPLSSYALAPIPVESLMNLVVDFVDTNGNWHWDSFEHLLPNCIILRIAAVQPP 193

Query: 199 CAGI-EDFPIWRHFSDGFFSVKSAYLHLYK-DLQRDHLVFPFQLLWKIPTPPRVNTFLWR 26
             G  +D   W +   G FSVKSAY+ + + +   +H    + + WK    PRV TF+W 
Sbjct: 194 MEGKGDDKFFWANSQWGDFSVKSAYMAITENETGIEH--SQWNIAWKWKGLPRVQTFIWL 251

Query: 25  VVHNRLMT 2
            +H+RL T
Sbjct: 252 ALHDRLKT 259


>KYP72596.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 646

 Score = 71.6 bits (174), Expect = 4e-12
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
 Frame = -2

Query: 379 QDSWVPYVAPLADHALHPIQPHEWHLTVHNYASN-GAWNWDVLHQILPYDICCKIAGIKA 203
           +DSW+     L+ H  H +  +E   +V +Y +  G W+WD LH +LP +I   +     
Sbjct: 377 EDSWLDGFPQLSTHVPHNLLGNEISKSVADYVTEEGTWDWDNLHNLLPANILDHLDSHVT 436

Query: 202 PCAGIE-DFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFPFQLLWKIPTPPRVNTFLWR 26
           P    + D   W   SDG FSVKSAY+ L  +    + V  F  +W+   P R+   LW+
Sbjct: 437 PIRDPKKDSLAWLGSSDGEFSVKSAYVCLDHNQNECNQVV-FSTIWRWKGPERIKLMLWK 495

Query: 25  VVHNRLMT 2
             HN L+T
Sbjct: 496 TAHNSLLT 503


>KYP63873.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 826

 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
 Frame = -2

Query: 376 DSWVPYVAPLADHALHPIQPHEWHLTVHNYA-SNGAWNWDVLHQILPYDICCKIAGIKAP 200
           DSW+P    L +  L P+  ++    V  Y   +  WN D +  +LP  I  +I G   P
Sbjct: 292 DSWLPSRVILEEVILSPVPENDKKKVVSEYIHDDDNWNIDDIRSVLPGQIWWEIMGTAPP 351

Query: 199 CAGIE-DFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFP-FQLLWKIPTPPRVNTFLWR 26
            +  + +  +WR  +DG FS+KS Y  L    Q DHL    F+++WK P P RV  F+W+
Sbjct: 352 SSENDANCMVWRASADGSFSIKSTYNAL--STQFDHLNHQLFKMVWKWPGPERVRCFMWK 409

Query: 25  VVHNRLMT 2
           + H  L T
Sbjct: 410 LAHKSLCT 417


>KYP65965.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1043

 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = -2

Query: 376 DSWVPYVAPLADHALHPIQPHEWHLTVHNYASN-GAWNWDVLHQILPYDICCKIAGIKAP 200
           D WVP + PL   AL  + P E    V +Y  + G W+ D +   LP ++   I  +  P
Sbjct: 611 DRWVPGLEPLIQSALSFVPPGELLKAVSDYVDDLGGWDIDQIQSYLPPNVWLCIQRLAPP 670

Query: 199 CAGI-EDFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFPFQLLWKIPTPPRVNTFLWRV 23
            AG+  D  +W + +DG F+++SA+  +   +Q  +    F+++W+   P RV   LW++
Sbjct: 671 HAGVGRDRVVWDNTTDGNFTLRSAH-EISSSMQVTNSPPIFKMIWRWKGPERVRVLLWKI 729

Query: 22  VHNRLMT 2
            HN L+T
Sbjct: 730 AHNSLLT 736


>EOX93148.1 Uncharacterized protein TCM_001997 [Theobroma cacao]
          Length = 523

 Score = 70.9 bits (172), Expect = 8e-12
 Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
 Frame = -2

Query: 337 ALHPIQPHEWHLTVHNYASN-GAWNWDVLHQILPYDICCKIAGIKA-PCAGIEDFPIWRH 164
           A+  I  HE  L + +Y +  G W++D L QI P+ I  +I  ++  P +  ED   WR 
Sbjct: 305 AIKEILDHEVELPIASYCNEYGGWDFDQLLQIFPHHIVLRILTVQIDPSSVEEDVVYWRL 364

Query: 163 FSDGFFSVKSAY-LHLYKDLQRDHLVFPFQLLWKIPTPPRVNTFLWRVVHNRL 8
            S G FSVK+AY + + K+   +     +  LW++P+P +V  FLWR++H+ L
Sbjct: 365 TSSGIFSVKTAYDVQMEKETPTESF---WDQLWRLPSPRKVRVFLWRLIHDSL 414


>KYP62996.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 506

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
 Frame = -2

Query: 376 DSWVPYVAPLADHALHPIQPHEWHLTVHNYASN-GAWNWDVLHQILPYDICCKIAGIKAP 200
           D W+P +  L   A H +   E +  V +Y    G WN   +  +LP DI   I G  AP
Sbjct: 132 DHWIPAIPKLISEADHFVPMQEINKHVADYVDQFGEWNLSSIEHLLPPDIFNVILGQSAP 191

Query: 199 -CAGIEDFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFPFQLLWKIPTPPRVNTFLWRV 23
             +  +D   W++ +DG FS+K  Y  L   +        F+LLW    P R+ TFLWR+
Sbjct: 192 GLSPDKDVLAWKNAADGEFSLKKGYEFLCP-VGVSSRQKVFKLLWNWRGPERIQTFLWRL 250

Query: 22  VHNRLMT 2
            HN L+T
Sbjct: 251 AHNSLLT 257


>XP_010520746.1 PREDICTED: uncharacterized protein LOC104799794 [Tarenaya
           hassleriana]
          Length = 451

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
 Frame = -2

Query: 379 QDSWVPYVAPLADHALHPIQPHEWHLTVHNYAS-NGAWNWDVLHQILPYDICCKIAGIKA 203
           +D+WV    PL ++     +P    + V  +A+ +G W WD    +LP   C +IA +  
Sbjct: 242 RDNWVEDDKPLIEYLSEEDRPSINPVMVAEFANADGKWKWDKFASLLPNSTCLRIASLLP 301

Query: 202 PCAGIE-DFPIWRHFSDGFFSVKSAYLHLYKD-LQRDHLVFPFQLLWKIPTPPRVNTFLW 29
           P    E D   W    DG  +VKSAY  L  D +   H ++   ++WK   P R+ TFLW
Sbjct: 302 PRQSAESDRLYWCSSRDGKCTVKSAYNSLLPDNITSSHTIW--SVIWKWGDPERIRTFLW 359

Query: 28  RVVHNRLMT 2
              +NRL+T
Sbjct: 360 LACNNRLLT 368


>KYP37594.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 522

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
 Frame = -2

Query: 376 DSWVPYVAPLADHALHPIQPHEWHLTVHNYAS-NGAWNWDVLHQILPYDICCKIAGIKAP 200
           DSW+P    +A+  + P+   +    V NY + +G WN + + + LP  I  +I GI  P
Sbjct: 98  DSWLPSRTIIAEVVVQPVPMQDRRKVVANYVNEDGTWNLNEIRRFLPNMIWLEIIGIGPP 157

Query: 199 CA-GIEDFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFPFQLLWKIPTPPRVNTFLWRV 23
            +   +D  +W    DG FS+K+AY  +   L  ++    +  +WK   P R+   LWRV
Sbjct: 158 SSENDKDILVWGGSKDGRFSIKTAYNSISPPLVNNNQAL-YSAIWKWKGPQRIRCLLWRV 216

Query: 22  VHNRLMT 2
             N L T
Sbjct: 217 AQNSLCT 223


>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
          Length = 1250

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
 Frame = -2

Query: 376  DSWVPYVAPLADHALHPIQPHEWHLTVHNYAS-NGAWNWDVLHQILPYDICCKIAGIKAP 200
            D+WVP V PL +     +     + +V  +   NG W  D+    +P+ +  KI G+  P
Sbjct: 822  DNWVPKVGPLINVVNRDVPASNSNNSVSMFVDQNGDWQKDLFEDFIPFSVQQKIYGLIPP 881

Query: 199  --CAGIEDFPIWRHFSDGFFSVKSAYL--HLYKDLQRDHLVFPFQLLWKIPTPPRVNTFL 32
              C G  D   W   SDG FS KSAY+  H+       HL   F L+WK   P R+  FL
Sbjct: 882  RVCMG-SDTLAWGCTSDGRFSTKSAYMSTHVSSIHPNQHL---FNLVWKWRGPERIKLFL 937

Query: 31   WRVVHNRLMT 2
            W+  H  L+T
Sbjct: 938  WKATHACLLT 947


>XP_009344908.1 PREDICTED: uncharacterized protein LOC103936764 [Pyrus x
            bretschneideri]
          Length = 1365

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
 Frame = -2

Query: 379  QDSWVPYVAPLADHALHPIQPHEWHLTVHNYASNGAWNWDVLHQILPYDICCKIAGIKAP 200
            +D+W+     L + A  P+       +V ++ ++  WN ++L+  LP DI   I  +   
Sbjct: 937  KDNWLES-GVLENFATIPLSADMLEWSVDDFLTDDGWNVELLYSCLPPDIVEHIFSLHVG 995

Query: 199  CAGI-EDFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFPFQLLWKIPTPPRVNTFLWRV 23
             A   ED  IW   + G FSVK+AYL L+ D   D + + +  +WK+  PP++ TFLW +
Sbjct: 996  IANHREDKVIWSLTNSGTFSVKTAYLSLFGD--DDIIPWKWNFIWKLKLPPKLVTFLWTI 1053

Query: 22   VHNRLMT 2
             H +++T
Sbjct: 1054 GHGKILT 1060


>KYP73874.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 462

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
 Frame = -2

Query: 376 DSWVPYVAPLADHALHPIQPHEWHLTVHNYA-SNGAWNWDVLHQILPYDICCKIAGIKAP 200
           D W+P    L D    PI       TV +Y   +G+WN + +H ++P     ++ G   P
Sbjct: 295 DRWLPSKVVLIDVTTGPISIDLLKKTVADYTREDGSWNLEGIHDLIPSSCWNELKGTAPP 354

Query: 199 CAGIE-DFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFPFQLLWKIPTPPRVNTFLWRV 23
               + D  +W   ++G FS+KSAY  L +     +L   F L+W+ P P  +  FLWR+
Sbjct: 355 STDNDGDCLVWGGSNNGVFSMKSAYEAL-RTSAPSNLKNLFSLIWRWPGPEHIRCFLWRI 413

Query: 22  VHNRLMT 2
            HN L T
Sbjct: 414 AHNSLCT 420


>KYP71696.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 325

 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
 Frame = -2

Query: 376 DSWVPYVAPLADHALHPIQPHEWHLTVHNYASN-GAWNWDVLHQILPYDICCKIAGIKAP 200
           ++W+P   P+  ++   I P E   T+H Y S  G W  D L   LP +I   I     P
Sbjct: 134 NNWLPNHMPIIHYSSSFIPPVELFKTIHEYTSGQGTWQIDHLQSWLPQNILETIYHFPLP 193

Query: 199 CAGI-EDFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFPFQLLWKIPTPPRVNTFLWRV 23
             G  +D  +W    DG F+ KSA           H   PF+ +W+   P R+   LWRV
Sbjct: 194 TNGYGQDVVLWSPSKDGVFTTKSAVTIASSSHTVSHPP-PFKAIWRWNGPERIRVLLWRV 252

Query: 22  VHNRLMT 2
           VH  LMT
Sbjct: 253 VHGSLMT 259


>OMO73242.1 reverse transcriptase [Corchorus capsularis]
          Length = 1482

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
 Frame = -2

Query: 376  DSWVPYVAPLADHALHPIQPHEWHLTVHNYASN-GAWNWDVLHQILPYDICCKIAGIKAP 200
            D W   + PL +  + P+  HE  LTV       G W++ VL   LP+ +C  I  I   
Sbjct: 1121 DDWTG-LGPLKELVVGPLHQHEDRLTVRTIIDGEGGWDFSVLSLQLPHRVCQAIWAIPIQ 1179

Query: 199  CAGI-EDFPIWRHFSDGFFSVKSAYLHLYKDLQRDHLVFPFQLLWKIPTPPRVNTFLWRV 23
                 +D   W+  +DG F++KSAY HL +    +   F ++ +WK PT P++  F+W  
Sbjct: 1180 ATSTGQDCLSWKGTADGKFTIKSAY-HLARGSNVEGK-FNWKWVWKTPTHPKIQHFIWLT 1237

Query: 22   VHNRLMT 2
             H RL+T
Sbjct: 1238 AHGRLVT 1244


Top