BLASTX nr result
ID: Glycyrrhiza29_contig00040646
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00040646
(464 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterran... 73 2e-20
GAU37589.1 hypothetical protein TSUD_365100 [Trifolium subterran... 84 6e-16
XP_013467017.1 hypothetical protein MTR_1g041340 [Medicago trunc... 65 8e-14
GAU14768.1 hypothetical protein TSUD_204170 [Trifolium subterran... 77 1e-13
KYP64684.1 Putative ribonuclease H protein At1g65750 family, par... 55 3e-13
ABN08698.1 RNA-directed DNA polymerase ; Ribonuclease H, putativ... 65 3e-11
GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterran... 69 1e-10
GAU35447.1 hypothetical protein TSUD_364030 [Trifolium subterran... 67 4e-10
GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterran... 67 5e-10
GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum] 66 8e-10
GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum] 66 8e-10
GAU11790.1 hypothetical protein TSUD_75410 [Trifolium subterraneum] 66 8e-10
GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterran... 66 1e-09
GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterran... 66 1e-09
GAU51664.1 hypothetical protein TSUD_268670 [Trifolium subterran... 65 2e-09
GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum] 65 3e-09
GAU42452.1 hypothetical protein TSUD_235210 [Trifolium subterran... 64 4e-09
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ... 64 4e-09
GAU45929.1 hypothetical protein TSUD_100060 [Trifolium subterran... 62 8e-09
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran... 63 1e-08
>GAU41508.1 hypothetical protein TSUD_302460 [Trifolium subterraneum]
Length = 1075
Score = 73.2 bits (178), Expect(2) = 2e-20
Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLH-YGSPIWNSIFKAKEVLKEG 284
NT++L KLVWDM S+KLWV +LS+K+V G LH+ H GSP W+SI AK VLK+G
Sbjct: 662 NTSLLGKLVWDMVQSSNKLWVNLLSNKYVAGPEILHSNSHSTGSPTWSSIIHAKNVLKDG 721
Query: 283 YKFR 272
+ +R
Sbjct: 722 FSWR 725
Score = 52.8 bits (125), Expect(2) = 2e-20
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 15/88 (17%)
Frame = -3
Query: 261 SGDSLFWYSP*MNFGPL---------------LWKSHAPENLRFLIWLALHNSSPTMQVL 127
SG S FW+S G L + P + F WL HNS PT+ +L
Sbjct: 728 SGSSSFWFSHWSPLGYLGTLVPYIDIHDLQLSVKDLKLPSKIIFFFWLVCHNSVPTLSLL 787
Query: 126 HRRGISQLANCTRCNGIVEEIVLHCVRD 43
+ R +S C RC G+ EE LHCVRD
Sbjct: 788 NHRKMSNSFICARC-GLQEETFLHCVRD 814
>GAU37589.1 hypothetical protein TSUD_365100 [Trifolium subterraneum]
Length = 648
Score = 84.0 bits (206), Expect = 6e-16
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYGSPIWNSIFKAKEVLKEGY 281
NTAML KLVWD+Q ++K WV M+ K++ F +TP YGSPIWNSI KAK+VL EGY
Sbjct: 421 NTAMLGKLVWDIQQNTNKPWVHMIKDKYLYNKMFFNTPRSYGSPIWNSISKAKQVLLEGY 480
Query: 280 KFRVA 266
FR++
Sbjct: 481 HFRIS 485
>XP_013467017.1 hypothetical protein MTR_1g041340 [Medicago truncatula] KEH41052.1
hypothetical protein MTR_1g041340 [Medicago truncatula]
Length = 317
Score = 65.5 bits (158), Expect(2) = 8e-14
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYGSPIWNSIFKAKEVLKEGY 281
NTAML KLVWD+ C SDKLWV +L H++V FL + GS +W S +A L+ G
Sbjct: 107 NTAMLGKLVWDIYCNSDKLWVSLLRHRYVGDKFFLDIHITQGSTVWQSNMQAIATLRNGS 166
Query: 280 KFRV 269
+R+
Sbjct: 167 GYRL 170
Score = 38.5 bits (88), Expect(2) = 8e-14
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 195 APENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRC 85
AP+ + FL W H+ PT +LH +G+ NC RC
Sbjct: 204 APKKIIFLHWTVCHDVVPTRSLLHNKGMLDTNNCLRC 240
>GAU14768.1 hypothetical protein TSUD_204170 [Trifolium subterraneum]
Length = 503
Score = 77.0 bits (188), Expect = 1e-13
Identities = 36/64 (56%), Positives = 45/64 (70%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYGSPIWNSIFKAKEVLKEGY 281
NTAML KLVWD+Q QSDK WV ML K++ FL + +GSPIWNSI KAK L +G+
Sbjct: 107 NTAMLGKLVWDLQQQSDKPWVHMLQDKYLDSSHFLTSKRKFGSPIWNSISKAKLALLDGF 166
Query: 280 KFRV 269
+R+
Sbjct: 167 HYRI 170
Score = 60.5 bits (145), Expect = 8e-08
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
+W APE ++FLIW HNS PT+ +LH R ++Q C+RC V E LHC+RD
Sbjct: 280 IWNLRAPEKIKFLIWCICHNSIPTLDMLHHRHLAQDNICSRCLANV-ETTLHCLRD 334
>KYP64684.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 490
Score = 55.5 bits (132), Expect(2) = 3e-13
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Frame = -2
Query: 463 VNTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYG-SPIWNSIFKAKEVLKE 287
VN ++L KLVWDM K WV +LS+ ++ G S L G SPIW+SI K L+E
Sbjct: 78 VNVSLLGKLVWDMLSAPQKPWVHLLSNLYLHGDSILCAQTRRGASPIWSSIIKTLPSLRE 137
Query: 286 GYK----------------FRVAGQWGF--PILVFPIDEFWTSIMEISCP 191
G++ + + + F P+L DE W + ++ P
Sbjct: 138 GFQPHLGSGASSLVTSRGYYTASSGYRFLTPVLSSEGDEVWKKLWKVMVP 187
Score = 46.6 bits (109), Expect(2) = 3e-13
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRDFLY 34
LWK PE ++F +W LH + PT QV R +++ C+ C+ E +LH +RD Y
Sbjct: 181 LWKVMVPEKVKFFLWQCLHLALPTNQVRADRRLAESGACSPCS-CPRETILHALRDCPY 238
>ABN08698.1 RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
truncatula]
Length = 86
Score = 65.5 bits (158), Expect = 3e-11
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
+WK PE ++FL+WLA HNS PT+ +L+ R I+ A C+RCN VE LHCV D
Sbjct: 16 IWKLKLPEKIKFLVWLACHNSVPTISLLNHRNIAPTATCSRCNLHVETF-LHCVHD 70
>GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterraneum]
Length = 902
Score = 68.6 bits (166), Expect = 1e-10
Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLH-YGSPIWNSIFKAKEVLKEG 284
N ++L KLVWDM S+KLWV +LS K+VKG +FL + + GSP W+SI +AK +LK+G
Sbjct: 589 NISLLGKLVWDMVQSSNKLWVDLLSSKYVKGSTFLLSGNNSSGSPTWSSIIQAKNILKDG 648
Query: 283 YKFR 272
+ +R
Sbjct: 649 FSWR 652
Score = 64.7 bits (156), Expect = 3e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
+WK PE ++F WLA HNS PT+ +L+ R ++ A C RC G+ EE LHCVRD
Sbjct: 766 IWKLQLPEKIKFFFWLACHNSVPTLSLLNHRKMNLSATCARC-GLREETFLHCVRD 820
>GAU35447.1 hypothetical protein TSUD_364030 [Trifolium subterraneum]
Length = 526
Score = 67.0 bits (162), Expect = 4e-10
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYGSPIWNSIFKAKEVLKEGY 281
NT++L KLVW++ ++ LWVQ++ HK++KG L+ GS WN+I KA LK+GY
Sbjct: 199 NTSLLGKLVWNIHQNNEALWVQVIRHKYIKGDVLLNITKKPGSVTWNAIMKALSALKDGY 258
Query: 280 KFRV 269
FR+
Sbjct: 259 HFRL 262
>GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterraneum]
Length = 385
Score = 66.6 bits (161), Expect = 5e-10
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYGSPIWNSIFKAKEVLKEGY 281
NTA+L KLVW++ D LWVQ++ HK+VK F+ GS WNSI KA +K+G+
Sbjct: 41 NTALLGKLVWNIHQDKDVLWVQIMKHKYVKDDIFITITKKQGSVTWNSIMKALLAIKDGF 100
Query: 280 KFRV 269
+FR+
Sbjct: 101 QFRL 104
Score = 60.8 bits (146), Expect = 5e-08
Identities = 26/56 (46%), Positives = 34/56 (60%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
LW APE ++F +W ALHNS PT +L RG+ + C CN EE +HC+RD
Sbjct: 216 LWHIEAPEKIKFFLWTALHNSLPTRAMLSHRGLLSVYACPMCNA-AEETTMHCLRD 270
>GAU47648.1 hypothetical protein TSUD_27720 [Trifolium subterraneum]
Length = 521
Score = 66.2 bits (160), Expect = 8e-10
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYGSPIWNSIFKAKEVLKEGY 281
NT++L KLVW SD LWVQ++ HK++ FL P GS WN+I KA LK+G+
Sbjct: 91 NTSLLGKLVWSTHKNSDALWVQVIKHKYINEDLFLTIPKKPGSVTWNAIMKALLALKDGF 150
Query: 280 KFRV 269
+FR+
Sbjct: 151 QFRL 154
>GAU35042.1 hypothetical protein TSUD_30080 [Trifolium subterraneum]
Length = 724
Score = 66.2 bits (160), Expect = 8e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYGSPIWNSIFKAKEVLKEGY 281
NT++L KLVW++ ++ LWVQ++ HK++KG L+ G WN+I KA LKEGY
Sbjct: 255 NTSLLGKLVWNIHQNNEALWVQVIRHKYIKGEVLLNITKKPGLVTWNAIMKALSALKEGY 314
Query: 280 KFRV 269
FR+
Sbjct: 315 HFRL 318
>GAU11790.1 hypothetical protein TSUD_75410 [Trifolium subterraneum]
Length = 823
Score = 66.2 bits (160), Expect = 8e-10
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLH-YGSPIWNSIFKAKEVLKEG 284
NT++L +LVWDM S KLWV +LS K+V G FL + H GS W+SI +AK +LK+G
Sbjct: 136 NTSLLGELVWDMMQSSSKLWVDLLSSKYVAGPDFLLSSNHPSGSSTWSSITRAKNILKDG 195
Query: 283 YKFR 272
+ +R
Sbjct: 196 FSWR 199
>GAU49954.1 hypothetical protein TSUD_180180 [Trifolium subterraneum]
Length = 968
Score = 65.9 bits (159), Expect = 1e-09
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
+WK H PE ++F +WLA HNS PT+ +L+ R ++ C RC G+ +E LHC+RD
Sbjct: 653 IWKLHLPEKIKFFLWLACHNSVPTLSLLNHRKMNPSTTCVRC-GLQDESFLHCIRD 707
>GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterraneum]
Length = 1375
Score = 65.9 bits (159), Expect = 1e-09
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = -2
Query: 463 VNTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYGSPIWNSIFKAKEVLKEG 284
VNT++L KLVW M D LWVQ+L HK++ F GS WN+I KA + LK+G
Sbjct: 999 VNTSLLGKLVWHMHQNCDTLWVQVLRHKYLNDDMFFSITKKSGSITWNAIMKALQALKDG 1058
Query: 283 YKFRV 269
++FR+
Sbjct: 1059 FQFRL 1063
Score = 62.0 bits (149), Expect = 3e-08
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRDFLYL 31
+W APE ++F IW ALHN+ PT +L RG+ Q C RCN I EE LHC+R+ ++
Sbjct: 1175 VWHIPAPEKIKFFIWSALHNALPTKSMLSHRGLLQANLCPRCN-IEEESTLHCLRNCEFI 1233
Query: 30 GKCGNNWEW 4
+ + W
Sbjct: 1234 KRFWKSIVW 1242
>GAU51664.1 hypothetical protein TSUD_268670 [Trifolium subterraneum]
Length = 1231
Score = 65.1 bits (157), Expect(2) = 2e-09
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLH-TPLHYGSPIWNSIFKAKEVLKEG 284
N +L KLVWDM S+KLWV +LS K+ G + L + L SPIW+SI +AK +LK+G
Sbjct: 870 NICLLGKLVWDMVQSSNKLWVNLLSKKYTTGSTILQASSLSNASPIWSSIIRAKNILKDG 929
Query: 283 YKFR 272
+ +R
Sbjct: 930 FTWR 933
Score = 24.3 bits (51), Expect(2) = 2e-09
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Frame = -3
Query: 261 SGDSLFWYSP*MNFGPL--LWKSHAPENLRFLIWLALHNSSPTMQVLHRR---GISQLAN 97
SG S FW+SP + G L L +L + L ++SP Q+L+ + S L N
Sbjct: 936 SGSSSFWFSPWSSLGYLGTLVPYVDIHDLHLTVKDVLASNSPHSQILYTQLPPSASDLIN 995
Query: 96 --CTRCNGIVEEIVLHC-VRDFLYLGKCGNNW 10
R N ++++ + ++ Y K G +W
Sbjct: 996 NLNIRFNDSIDDVFIWSNNKNGSYTTKSGYSW 1027
>GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum]
Length = 592
Score = 64.7 bits (156), Expect = 3e-09
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
+WK PE ++F WLA HN PT+ +L+ R +S A CTRC G+ +E LHC+RD
Sbjct: 301 IWKIQLPEKIKFFFWLACHNFVPTLSLLNHRKMSHSATCTRC-GLQDESFLHCIRD 355
Score = 60.5 bits (145), Expect = 8e-08
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTP-LHYGSPIWNSIFKAKEVLKEG 284
N ++L K VWDM S KLWV +LS K+ G + L T GS W+SI +AK++LKEG
Sbjct: 124 NISLLEKHVWDMVQSSSKLWVDLLSSKYTAGKNLLLTSNPSSGSSTWSSIIRAKDILKEG 183
Query: 283 YKFR 272
+ +R
Sbjct: 184 FSWR 187
>GAU42452.1 hypothetical protein TSUD_235210 [Trifolium subterraneum]
Length = 770
Score = 64.3 bits (155), Expect = 4e-09
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
+WK PE ++F WLA HNSSPT+ +L+ R ++ A CT C G+ +E LHC+RD
Sbjct: 649 IWKLQLPEKIKFFFWLACHNSSPTLSLLNHRKMNPSATCT-CCGLRDESFLHCIRD 703
>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 64.3 bits (155), Expect = 4e-09
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
+W+ APE + LIWLA HN++PT+ +LH R ++ A C+RC G +E LHCVRD
Sbjct: 980 IWQLTAPEKYKLLIWLACHNAAPTLSLLHHRKMAPAATCSRC-GENDESFLHCVRD 1034
Score = 59.7 bits (143), Expect = 2e-07
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLH-YGSPIWNSIFKAKEVLKEG 284
N +L KLVWDM ++KLWV +L+ K+ G S L ++ SP W SI +AK++LK G
Sbjct: 863 NICLLGKLVWDMVQSTNKLWVNLLAKKYSSGTSLLEANVNSNSSPSWFSIIRAKDILKTG 922
Query: 283 YKFR 272
Y +R
Sbjct: 923 YSWR 926
>GAU45929.1 hypothetical protein TSUD_100060 [Trifolium subterraneum]
Length = 188
Score = 61.6 bits (148), Expect = 8e-09
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRDFLYL 31
+W APE ++F IW ALHN+ PT + RG+ Q+ C RCN I EE LHC+R+ ++
Sbjct: 127 VWHIPAPEKIKFFIWTALHNALPTKTMFSHRGLFQINLCPRCN-IEEETTLHCLRNCEFI 185
Query: 30 GKC 22
KC
Sbjct: 186 -KC 187
>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
Length = 545
Score = 62.8 bits (151), Expect = 1e-08
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = -2
Query: 460 NTAMLRKLVWDMQCQSDKLWVQMLSHKFVKGHSFLHTPLHYGSPIWNSIFKAKEVLKEGY 281
NT++L KLVW M D W+Q+L HK++ FL GS WN+I KA + LK+G+
Sbjct: 57 NTSLLGKLVWHMHQNCDTFWLQILRHKYLNDDMFLSITKKPGSITWNAIMKALQALKDGF 116
Query: 280 KFRV 269
+FR+
Sbjct: 117 QFRL 120
Score = 60.8 bits (146), Expect = 6e-08
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = -3
Query: 210 LWKSHAPENLRFLIWLALHNSSPTMQVLHRRGISQLANCTRCNGIVEEIVLHCVRD 43
+W APE ++F IW ALHN+ PT +L RG+ Q C RCN I EE LHC+R+
Sbjct: 232 VWHIPAPEKIKFFIWSALHNALPTKSMLSHRGLLQANLCPRCN-IEEESTLHCLRN 286