BLASTX nr result
ID: Glycyrrhiza29_contig00039317
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00039317
(266 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP38814.1 Retrovirus-related Pol polyprotein from transposon TN... 147 1e-39
KYP43260.1 Retrovirus-related Pol polyprotein from transposon TN... 130 2e-35
KYP56919.1 Retrovirus-related Pol polyprotein from transposon TN... 118 2e-30
KYP44288.1 Retrovirus-related Pol polyprotein from transposon TN... 120 5e-30
KYP70533.1 Retrovirus-related Pol polyprotein from transposon TN... 117 4e-29
XP_016679117.1 PREDICTED: uncharacterized protein LOC107898077 [... 118 4e-29
CAN69956.1 hypothetical protein VITISV_032883 [Vitis vinifera] 116 2e-28
KYP62303.1 Retrovirus-related Pol polyprotein from transposon TN... 110 4e-28
KYP64079.1 Retrovirus-related Pol polyprotein from transposon TN... 111 1e-27
KYP76423.1 Retrovirus-related Pol polyprotein from transposon TN... 111 1e-26
CAN65377.1 hypothetical protein VITISV_014188 [Vitis vinifera] 110 2e-26
XP_016733413.1 PREDICTED: uncharacterized protein LOC107944102 [... 110 3e-26
CAN77916.1 hypothetical protein VITISV_031396 [Vitis vinifera] 110 3e-26
CAN66512.1 hypothetical protein VITISV_026972 [Vitis vinifera] 109 5e-26
KYP68556.1 Retrovirus-related Pol polyprotein from transposon TN... 109 5e-26
CAN64779.1 hypothetical protein VITISV_043230 [Vitis vinifera] 109 5e-26
CAN76284.1 hypothetical protein VITISV_041019 [Vitis vinifera] 109 6e-26
KYP36206.1 Retrovirus-related Pol polyprotein from transposon TN... 108 1e-25
CAN80477.1 hypothetical protein VITISV_032838 [Vitis vinifera] 107 2e-25
KYP34090.1 Retrovirus-related Pol polyprotein from transposon TN... 107 3e-25
>KYP38814.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 611
Score = 147 bits (371), Expect = 1e-39
Identities = 71/94 (75%), Positives = 77/94 (81%), Gaps = 6/94 (6%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
CICFTYVPKVKRDKLDK+ EA IFI YST SKAYRV+QPQT KILISRDV F EDKQWNW
Sbjct: 351 CICFTYVPKVKRDKLDKRVEARIFIDYSTPSKAYRVYQPQTGKILISRDVCFVEDKQWNW 410
Query: 183 EQDDWKQNSDFSFIN------DENIDDPPVRGSR 266
E+DDWKQ +FSFI DEN+DDPPVR +R
Sbjct: 411 EKDDWKQVPNFSFIKEKDEIFDENVDDPPVRRTR 444
>KYP43260.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 302
Score = 130 bits (328), Expect = 2e-35
Identities = 67/93 (72%), Positives = 75/93 (80%), Gaps = 6/93 (6%)
Frame = +3
Query: 6 ICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNWE 185
IC TYVPKVKRDKLDKK +AGIFIGYST+SKAYRV+QPQT KILISRDV F EDK+ +WE
Sbjct: 79 ICSTYVPKVKRDKLDKKVKAGIFIGYSTSSKAYRVYQPQTGKILISRDVCFVEDKKQSWE 138
Query: 186 QDDWKQNSDFSF------INDENIDDPPVRGSR 266
+DDWKQ +FSF I DEN DP VRG+R
Sbjct: 139 KDDWKQVPNFSFTEEKDEIFDENNVDPLVRGTR 171
>KYP56919.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 305
Score = 118 bits (295), Expect = 2e-30
Identities = 51/88 (57%), Positives = 67/88 (76%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CFTYVP++KRDKLDKKAE G+F+GYS+ SK Y + QP T+KILISRDVHF E+++W+W
Sbjct: 92 CLCFTYVPQIKRDKLDKKAEPGVFVGYSSVSKDYTILQPHTKKILISRDVHFMENEKWSW 151
Query: 183 EQDDWKQNSDFSFINDENIDDPPVRGSR 266
+ +D S DE +D PVRG+R
Sbjct: 152 NNVEKNSTTDSSHNQDELVDHIPVRGTR 179
>KYP44288.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 559
Score = 120 bits (301), Expect = 5e-30
Identities = 55/88 (62%), Positives = 70/88 (79%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CF++VP+VKRDKLDKKAE G+FIGY+ TSKAYR+FQPQ KIL+SRDV F E+KQW+W
Sbjct: 241 CLCFSFVPQVKRDKLDKKAEPGVFIGYNNTSKAYRIFQPQNGKILVSRDVKFMEEKQWSW 300
Query: 183 EQDDWKQNSDFSFINDENIDDPPVRGSR 266
E+ KQ D++ID+ PVRG+R
Sbjct: 301 EELIKKQLQKIPQFVDDDIDNFPVRGTR 328
>KYP70533.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 459
Score = 117 bits (292), Expect = 4e-29
Identities = 58/105 (55%), Positives = 72/105 (68%), Gaps = 17/105 (16%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CFT+VP+ KRDKLDK+A GIFIGYST SKAY++FQPQT KI+ISRDVHF ED++WNW
Sbjct: 141 CLCFTHVPQSKRDKLDKRASQGIFIGYSTVSKAYKIFQPQTGKIIISRDVHFLEDEEWNW 200
Query: 183 EQ-----------------DDWKQNSDFSFINDENIDDPPVRGSR 266
+ +QN D S+ N E +DD PVRG+R
Sbjct: 201 NDKRKTNLVSTNVKFKSLASNTRQNEDESWQN-ELLDDDPVRGTR 244
>XP_016679117.1 PREDICTED: uncharacterized protein LOC107898077 [Gossypium
hirsutum]
Length = 662
Score = 118 bits (295), Expect = 4e-29
Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 16/104 (15%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CFTY+P+VKRDKLDKKAEA IF+GYST SKAYRVFQP T ++++SRDV+F E++QWNW
Sbjct: 536 CLCFTYIPQVKRDKLDKKAEASIFVGYSTVSKAYRVFQPHTGRVIVSRDVYFVENEQWNW 595
Query: 183 EQDDWKQNSDFSFIN----------------DENIDDPPVRGSR 266
E D K N +S N D DD PVRG+R
Sbjct: 596 E-DSTKTNQTYSAPNCFTIGSTLEELEDEGQDVLADDAPVRGTR 638
>CAN69956.1 hypothetical protein VITISV_032883 [Vitis vinifera]
Length = 811
Score = 116 bits (291), Expect = 2e-28
Identities = 53/88 (60%), Positives = 69/88 (78%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CF+YVP+VKRDKLDKKA+ G+FIGYS +S+AYR+FQPQ KIL+S+DV F ED+QWN
Sbjct: 351 CLCFSYVPQVKRDKLDKKAKPGVFIGYSNSSEAYRIFQPQNGKILVSKDVKFMEDRQWNC 410
Query: 183 EQDDWKQNSDFSFINDENIDDPPVRGSR 266
E+ Q + DE+IDD PVRG++
Sbjct: 411 EESIKMQLPEVPRYFDEDIDDVPVRGTK 438
>KYP62303.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 238
Score = 110 bits (275), Expect = 4e-28
Identities = 47/88 (53%), Positives = 72/88 (81%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CF+Y+P++KRDKLDKKAEAGIF+GY++TSKAY++F PQ+ KI++SRDV F E+++W+
Sbjct: 59 CLCFSYIPQIKRDKLDKKAEAGIFVGYNSTSKAYKIFLPQSNKIIVSRDVQFFEEEKWSK 118
Query: 183 EQDDWKQNSDFSFINDENIDDPPVRGSR 266
E + K+ ++E++DD P+RG+R
Sbjct: 119 ESE--KKLLQVQEGSEEDVDDQPIRGTR 144
>KYP64079.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 343
Score = 111 bits (277), Expect = 1e-27
Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 13/101 (12%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+ F+Y+P+VKRDKLDKKAE GIF+GYS SKAYR++ PQ+ K++ISRDV F EDKQW+W
Sbjct: 61 CLSFSYIPQVKRDKLDKKAEPGIFVGYSLQSKAYRIYLPQSNKVIISRDVQFLEDKQWSW 120
Query: 183 EQDDWKQNSDFSFIN-------------DENIDDPPVRGSR 266
E+ K +S+ D+N DD P+RG+R
Sbjct: 121 EEPIQKDFPQWSWEEPIQKDFPENPQQLDDNTDDVPIRGTR 161
>KYP76423.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 644
Score = 111 bits (277), Expect = 1e-26
Identities = 55/104 (52%), Positives = 69/104 (66%), Gaps = 16/104 (15%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CFT+VP+ KRDKLDK+A GIFIGYST SKAY++FQPQT KI+ISRDVH ED++WNW
Sbjct: 65 CLCFTHVPQSKRDKLDKRASPGIFIGYSTVSKAYKIFQPQTGKIVISRDVHLVEDEEWNW 124
Query: 183 EQD----------------DWKQNSDFSFINDENIDDPPVRGSR 266
+ QN D ++ N E +DD P RG+R
Sbjct: 125 DDKGKTDMTSPNEKLKTPFSTTQNEDENWQN-ELVDDVPTRGTR 167
>CAN65377.1 hypothetical protein VITISV_014188 [Vitis vinifera]
Length = 738
Score = 110 bits (276), Expect = 2e-26
Identities = 50/88 (56%), Positives = 66/88 (75%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CF+Y+P VKRDKLDKKAEAGIFIGYS+ SKAYR++ P+ K+++SRDV F E + W+W
Sbjct: 141 CLCFSYIPHVKRDKLDKKAEAGIFIGYSSISKAYRIYLPENNKVIVSRDVKFFELESWSW 200
Query: 183 EQDDWKQNSDFSFINDENIDDPPVRGSR 266
E D + + + NIDD PVRG+R
Sbjct: 201 ENDKKLEFQE----ENANIDDEPVRGTR 224
>XP_016733413.1 PREDICTED: uncharacterized protein LOC107944102 [Gossypium
hirsutum] XP_016690648.1 PREDICTED: uncharacterized
protein LOC107907847 [Gossypium hirsutum]
Length = 943
Score = 110 bits (275), Expect = 3e-26
Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 16/102 (15%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CFT +P+VKRDKLDKKAEAGIF+GYST SKAYRVFQP T ++++SRD++F E++QWNW
Sbjct: 461 CLCFTCIPQVKRDKLDKKAEAGIFVGYSTVSKAYRVFQPHTGRVIVSRDIYFVENEQWNW 520
Query: 183 EQDDWKQNSDFSFIN----------------DENIDDPPVRG 260
E K N +S N D DD PV+G
Sbjct: 521 E-GSTKTNQTYSAPNHFTIGNTLEELEDEGQDVLADDAPVKG 561
>CAN77916.1 hypothetical protein VITISV_031396 [Vitis vinifera]
Length = 874
Score = 110 bits (274), Expect = 3e-26
Identities = 50/96 (52%), Positives = 70/96 (72%), Gaps = 8/96 (8%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CF+Y+P VKRDKLDKK EA IFIGYS+ SKAYR++ P+ K+++SRDV F E + W+W
Sbjct: 494 CLCFSYIPHVKRDKLDKKTEARIFIGYSSISKAYRIYLPENNKVIVSRDVKFFESESWSW 553
Query: 183 EQD---DWKQNSDFS-----FINDENIDDPPVRGSR 266
E D ++K+N +F ++NIDD PVRG++
Sbjct: 554 ENDKKLEFKENLEFQKDLEFQEENDNIDDEPVRGTK 589
>CAN66512.1 hypothetical protein VITISV_026972 [Vitis vinifera]
Length = 791
Score = 109 bits (273), Expect = 5e-26
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Frame = +3
Query: 18 YVPK---VKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNWEQ 188
Y P+ VKRDKLDKKAE G+FIGYS +SKAYR+FQPQ KIL+SRDV F ED+QWNWE+
Sbjct: 279 YTPQQNGVKRDKLDKKAEPGVFIGYSNSSKAYRIFQPQNGKILVSRDVKFIEDRQWNWEE 338
Query: 189 DDWKQNSDFSFINDENIDDPPVRGSR 266
Q + S DENIDD VRG+R
Sbjct: 339 SIKMQLPEVSQYFDENIDDVLVRGTR 364
>KYP68556.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 819
Score = 109 bits (273), Expect = 5e-26
Identities = 55/105 (52%), Positives = 71/105 (67%), Gaps = 17/105 (16%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CFT+VP+ KRDKLDK+A GIFIGYST SKAY++FQPQT KI+IS +VHF ED++WNW
Sbjct: 674 CLCFTHVPQSKRDKLDKRASPGIFIGYSTVSKAYKIFQPQTGKIIISSNVHFLEDEEWNW 733
Query: 183 EQ-----------------DDWKQNSDFSFINDENIDDPPVRGSR 266
+ + +QN D S+ N E +DD VRG+R
Sbjct: 734 DDKRKTNLVSTDGKFKSLASNTRQNEDESWQN-ELLDDDLVRGTR 777
>CAN64779.1 hypothetical protein VITISV_043230 [Vitis vinifera]
Length = 1102
Score = 109 bits (273), Expect = 5e-26
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CF+Y+P VKRDKLDKKAEA IFIGYS+ SKAYR++ P+ K+++SRDV F E + W+W
Sbjct: 505 CLCFSYIPHVKRDKLDKKAEAXIFIGYSSISKAYRIYLPENNKVIVSRDVKFFESESWSW 564
Query: 183 EQDDWKQNSDFSFINDENIDDPPVRGSR 266
E D + + + NIDD PVRG+R
Sbjct: 565 ENDKKLEFQE----ENANIDDEPVRGTR 588
>CAN76284.1 hypothetical protein VITISV_041019 [Vitis vinifera]
Length = 875
Score = 109 bits (272), Expect = 6e-26
Identities = 51/96 (53%), Positives = 69/96 (71%), Gaps = 8/96 (8%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CF+Y+P VKRDKLDKKA+ GIFIGYS+ SKAYR++ P+ K++ SRDV F E + W+W
Sbjct: 481 CLCFSYIPHVKRDKLDKKAKFGIFIGYSSISKAYRIYLPENNKVIFSRDVKFFESESWSW 540
Query: 183 EQD---DWKQNSDFS-----FINDENIDDPPVRGSR 266
E D + K+N +F ++NIDD PVRG+R
Sbjct: 541 ENDKKLESKENLEFQRDLKFQKENDNIDDEPVRGTR 576
>KYP36206.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 861
Score = 108 bits (270), Expect = 1e-25
Identities = 50/88 (56%), Positives = 67/88 (76%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+ FTYVP++KRDKLDKKAE G+F+GYS+ SKAYR+FQP T+KILIS+DVHF E+++W+
Sbjct: 657 CLYFTYVPQIKRDKLDKKAEPGVFVGYSSVSKAYRIFQPHTKKILISKDVHFMENEKWSS 716
Query: 183 EQDDWKQNSDFSFINDENIDDPPVRGSR 266
+ +D DE +D PVRG+R
Sbjct: 717 NNVEKILAADPLHNQDELVDHIPVRGTR 744
>CAN80477.1 hypothetical protein VITISV_032838 [Vitis vinifera]
Length = 464
Score = 107 bits (266), Expect = 2e-25
Identities = 47/87 (54%), Positives = 67/87 (77%)
Frame = +3
Query: 6 ICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNWE 185
+CF++VPKVKRDKLDK++E GIF+G+S TSKAYR++ PQT KI++SRDV F E ++W+W+
Sbjct: 315 LCFSFVPKVKRDKLDKQSEIGIFVGHSDTSKAYRIYLPQTNKIVVSRDVKFLEIEKWSWD 374
Query: 186 QDDWKQNSDFSFINDENIDDPPVRGSR 266
+ NDEN+D+ P+RG+R
Sbjct: 375 E-------KMQQYNDENVDELPIRGTR 394
>KYP34090.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1270
Score = 107 bits (267), Expect = 3e-25
Identities = 48/98 (48%), Positives = 67/98 (68%), Gaps = 10/98 (10%)
Frame = +3
Query: 3 CICFTYVPKVKRDKLDKKAEAGIFIGYSTTSKAYRVFQPQTRKILISRDVHFAEDKQWNW 182
C+CF+Y+P +KRDKLDKKAE GIF+GYS SKAYR++ P K+++SRDV F E W+W
Sbjct: 645 CLCFSYIPHIKRDKLDKKAEPGIFVGYSLISKAYRIYLPHKNKVIVSRDVKFLEFDCWSW 704
Query: 183 EQD---------DWKQNSDFSFIND-ENIDDPPVRGSR 266
+ + DWK N++ + E++DD PVRG+R
Sbjct: 705 KDNKFLEQIDCLDWKGNNELGLQEENEDVDDEPVRGTR 742