BLASTX nr result

ID: Glycyrrhiza29_contig00039119 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00039119
         (305 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU19203.1 hypothetical protein TSUD_198860 [Trifolium subterran...    62   6e-10
XP_002489092.1 hypothetical protein SORBIDRAFT_0088s002240, part...    50   5e-06

>GAU19203.1 hypothetical protein TSUD_198860 [Trifolium subterraneum]
          Length = 172

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 43/100 (43%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = -2

Query: 292 FQAYLDIGNQPASCW---PYRIIISGDVHGRRSQ*VLINVKGAQRG*GGGPVCFCEKSSA 122
           FQAYLDIGNQPASCW   PYRIIISGDV  R                             
Sbjct: 39  FQAYLDIGNQPASCWPGRPYRIIISGDVRTR----------------------------- 69

Query: 121 PVIAEKKT*YLYLMSIHPYFHSF*REANCLPAGSCMSGNV 2
               EK+                 REA+CLPAGSCMSGNV
Sbjct: 70  ----EKEP----------------READCLPAGSCMSGNV 89


>XP_002489092.1 hypothetical protein SORBIDRAFT_0088s002240, partial [Sorghum
           bicolor]
          Length = 58

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +2

Query: 2   DVTAHTATSRQAVSLPLKRMEVWMNRHQIQV 94
           DVTAHTA S+QAVS PL+ MEVW+NRHQ  V
Sbjct: 17  DVTAHTAPSQQAVSFPLEVMEVWINRHQTLV 47


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