BLASTX nr result
ID: Glycyrrhiza29_contig00037508
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00037508
(577 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012573667.1 PREDICTED: pentatricopeptide repeat-containing pr... 293 5e-93
XP_016206998.1 PREDICTED: pentatricopeptide repeat-containing pr... 279 4e-88
XP_007155935.1 hypothetical protein PHAVU_003G244800g [Phaseolus... 274 4e-86
KHN26464.1 Pentatricopeptide repeat-containing protein [Glycine ... 269 9e-86
XP_015954901.1 PREDICTED: pentatricopeptide repeat-containing pr... 274 1e-85
XP_017410302.1 PREDICTED: putative pentatricopeptide repeat-cont... 272 3e-85
XP_003551036.1 PREDICTED: pentatricopeptide repeat-containing pr... 271 5e-85
XP_014506479.1 PREDICTED: pentatricopeptide repeat-containing pr... 266 5e-83
ONH96536.1 hypothetical protein PRUPE_7G135300 [Prunus persica] 247 2e-75
XP_002277337.2 PREDICTED: pentatricopeptide repeat-containing pr... 246 3e-75
XP_008344308.1 PREDICTED: pentatricopeptide repeat-containing pr... 247 6e-75
XP_015890127.1 PREDICTED: pentatricopeptide repeat-containing pr... 244 2e-74
XP_008340659.1 PREDICTED: pentatricopeptide repeat-containing pr... 247 5e-74
KCW85747.1 hypothetical protein EUGRSUZ_B02507 [Eucalyptus grandis] 239 8e-73
XP_007047218.1 PREDICTED: pentatricopeptide repeat-containing pr... 240 9e-73
XP_009366958.1 PREDICTED: pentatricopeptide repeat-containing pr... 240 2e-72
XP_010043756.1 PREDICTED: pentatricopeptide repeat-containing pr... 239 3e-72
EEF38749.1 pentatricopeptide repeat-containing protein, putative... 236 2e-71
XP_002523554.2 PREDICTED: pentatricopeptide repeat-containing pr... 236 3e-71
XP_009787964.1 PREDICTED: pentatricopeptide repeat-containing pr... 234 1e-70
>XP_012573667.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g16610-like [Cicer arietinum]
Length = 653
Score = 293 bits (750), Expect = 5e-93
Identities = 147/197 (74%), Positives = 161/197 (81%), Gaps = 5/197 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERAL---ELFGLMRCDPDVV 172
DMYSKCG V SA +VFDEM +RDVFSWNSMMSCYVCNGL +R L E G+ C+PDVV
Sbjct: 147 DMYSKCGDVGSAVKVFDEMRKRDVFSWNSMMSCYVCNGLSDRVLGMLEFMGMDGCEPDVV 206
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWNTVMDAYC+MGL EA RVFEQIKDPNVISWT LI+GYS VG H VALEIFR+MVN G
Sbjct: 207 TWNTVMDAYCKMGLVDEALRVFEQIKDPNVISWTILISGYSGVGKHVVALEIFRDMVNVG 266
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKN--NDNAFYNSAGAALLTLYARCWRP 526
M+ PDV+ALSGILVSC+ LG+L SGREIHGYGLKN ++ FY SAGAALLTLYARC R
Sbjct: 267 MIIPDVDALSGILVSCKFLGNLTSGREIHGYGLKNGFRNDVFYKSAGAALLTLYARCNRL 326
Query: 527 RDVENVFRGMDKSDVVT 577
D E VFR MD SDVVT
Sbjct: 327 HDAEKVFRVMDDSDVVT 343
Score = 73.2 bits (178), Expect = 9e-12
Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 45/237 (18%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELF------GLMRCDP 163
D Y K G V+ A RVF+++ + +V SW ++S Y G ALE+F G++ D
Sbjct: 213 DAYCKMGLVDEALRVFEQIKDPNVISWTILISGYSGVGKHVVALEIFRDMVNVGMIIPDV 272
Query: 164 DVVTWNTV------------------------------------MDAYCRMGLCGEASRV 235
D ++ V + Y R +A +V
Sbjct: 273 DALSGILVSCKFLGNLTSGREIHGYGLKNGFRNDVFYKSAGAALLTLYARCNRLHDAEKV 332
Query: 236 FEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGD 415
F + D +V++W +I GY G +A E FREM G V D +S IL C D
Sbjct: 333 FRVMDDSDVVTWNAMILGYIDTGLGRLAFECFREMQGRG-VRIDQTTISTILPVC----D 387
Query: 416 LASGREIHGYGLKNNDN---AFYNSAGAALLTLYARCWRPRDVENVFRGMDKSDVVT 577
L G++IH Y K+N + YN AL+ +Y+ C ++F M K D+++
Sbjct: 388 LRCGKQIHAYVRKSNFDCAVGVYN----ALIHMYSICGCISYAYSLFSTMVKKDLIS 440
Score = 60.8 bits (146), Expect = 2e-07
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLM----------- 151
+Y++C + A +VF M + DV +WN+M+ Y+ GL A E F M
Sbjct: 319 LYARCNRLHDAEKVFRVMDDSDVVTWNAMILGYIDTGLGRLAFECFREMQGRGVRIDQTT 378
Query: 152 ----------RC-------------DPDVVTWNTVMDAYCRMGLCGEASRVFEQIKDPNV 262
RC D V +N ++ Y G A +F + ++
Sbjct: 379 ISTILPVCDLRCGKQIHAYVRKSNFDCAVGVYNALIHMYSICGCISYAYSLFSTMVKKDL 438
Query: 263 ISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDLASGREI 436
ISW T+I G+ G A+++ +EM ++G + P+ S L +C G + G E+
Sbjct: 439 ISWNTIIGGFGMHGLGQTAVKLLQEMSDSG-ISPNSVTFSSALSACSHSGLVDDGIEL 495
>XP_016206998.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like [Arachis ipaensis]
Length = 609
Score = 279 bits (714), Expect = 4e-88
Identities = 141/197 (71%), Positives = 158/197 (80%), Gaps = 5/197 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR----CDPDV 169
DMYSKC V+SA +VF+EM ERDVFSWNSMMS YV NGL E A+ L GLMR C+PDV
Sbjct: 163 DMYSKCADVQSAQKVFNEMSERDVFSWNSMMSGYVSNGLFEEAVRLLGLMRASGDCEPDV 222
Query: 170 VTWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNA 349
VTWNT+MDAYC+MGLC EA RVF QIKDPNVISWTTLI+GY+ VG HD+AL FR+MVN
Sbjct: 223 VTWNTMMDAYCKMGLCSEALRVFHQIKDPNVISWTTLISGYAGVGRHDLALGTFRDMVNF 282
Query: 350 GMVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWRP 526
GMV PDV++LSGILVSCR LG L SG E+H YG+K + +AFY SAGAALLTLYA C R
Sbjct: 283 GMVLPDVDSLSGILVSCRFLGSLTSGNEVHCYGVKVISGDAFYKSAGAALLTLYANCGRL 342
Query: 527 RDVENVFRGMDKSDVVT 577
D ENVF MDKSDVVT
Sbjct: 343 NDAENVFDRMDKSDVVT 359
Score = 65.1 bits (157), Expect = 6e-09
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELF------GLMRCDP 163
D Y K G A RVF ++ + +V SW +++S Y G + AL F G++ D
Sbjct: 230 DAYCKMGLCSEALRVFHQIKDPNVISWTTLISGYAGVGRHDLALGTFRDMVNFGMVLPDV 289
Query: 164 DVVTWNTV-----------------------------------MDAYCRMGLCGEASRVF 238
D ++ V + Y G +A VF
Sbjct: 290 DSLSGILVSCRFLGSLTSGNEVHCYGVKVISGDAFYKSAGAALLTLYANCGRLNDAENVF 349
Query: 239 EQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDL 418
+++ +V++W +I G +G + A++ F+EM A V D +S +L++C DL
Sbjct: 350 DRMDKSDVVTWNAMIYGLIDMGLANEAVQCFKEM-QASNVKVDQTTVSTLLLAC----DL 404
Query: 419 ASGREIHGYGLKNNDNAFYNSAGAALLTLYARCWRPRDVENVFRGMDKSDVVT 577
G+E+H Y LK+ N + AL+ Y++C +VF M D+V+
Sbjct: 405 RRGKEMHAYVLKHRYN-WVIPVCNALIHTYSKCGCIAYAYSVFSTMAVRDLVS 456
Score = 55.8 bits (133), Expect = 8e-06
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Frame = +2
Query: 8 YSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVVTW 178
YSKCG + A VF M RD+ SWN+++S + +GL + L+L MR PD VT+
Sbjct: 433 YSKCGCIAYAYSVFSTMAVRDLVSWNTIISGFGMHGLGQTVLKLLQEMRDAGISPDSVTF 492
Query: 179 NTVMDAYCRMGLCGEASRVF-----EQIKDPNVISWTTLITGYSSVGNHDVALEIFREMV 343
++ + A GL E +F E +P ++ ++ + G LE +
Sbjct: 493 SSALSACSHSGLVNEGIELFYRMIEEFSLNPAKEHFSCVVDMLARAGR----LEDAFHFI 548
Query: 344 NAGMVFPDVEALSGILVSCRSLGDLASGR 430
N + PD +L +C+ +++ G+
Sbjct: 549 NKMPLEPDKHVWGALLAACQEHQNVSVGK 577
>XP_007155935.1 hypothetical protein PHAVU_003G244800g [Phaseolus vulgaris]
ESW27929.1 hypothetical protein PHAVU_003G244800g
[Phaseolus vulgaris]
Length = 619
Score = 274 bits (701), Expect = 4e-86
Identities = 141/198 (71%), Positives = 158/198 (79%), Gaps = 6/198 (3%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR-----CDPD 166
DMYSKCG V SA +VFDEMPERDVFSWNSMMS YVCNG P+RA+E+F +M+ C PD
Sbjct: 146 DMYSKCGDVWSATQVFDEMPERDVFSWNSMMSGYVCNGFPQRAVEVFRVMKGNGCECAPD 205
Query: 167 VVTWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVN 346
VVTWNT+MDAYCRMG C EA RVF +I+ PNVISWT LI+GY+SVG H V+L IFREMVN
Sbjct: 206 VVTWNTLMDAYCRMGKCCEAWRVFGEIEIPNVISWTILISGYASVGRHHVSLGIFREMVN 265
Query: 347 AGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWR 523
GMV PDV+ALSG+LVSCR+LG LASG EIHGYGLK + FY SAGAALL LYA C R
Sbjct: 266 VGMVSPDVDALSGVLVSCRALGALASGMEIHGYGLKIMYGDVFYRSAGAALLALYAGCGR 325
Query: 524 PRDVENVFRGMDKSDVVT 577
+ VFR MDKSDVVT
Sbjct: 326 LDRADVVFRRMDKSDVVT 343
>KHN26464.1 Pentatricopeptide repeat-containing protein [Glycine soja]
Length = 473
Score = 269 bits (688), Expect = 9e-86
Identities = 139/197 (70%), Positives = 157/197 (79%), Gaps = 6/197 (3%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR-----CDPDV 169
MYSKCG V SA +VFDEM ERDVFSWNSMMS YV NGLP +A+E+ G+M+ C+PDV
Sbjct: 1 MYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYVWNGLPHKAVEVLGVMKKDGCGCEPDV 60
Query: 170 VTWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNA 349
VTWNTVMDAYCRMG C EASRVF +I+DPNVISWT LI+GY+ VG HDV+L IFR+MVN
Sbjct: 61 VTWNTVMDAYCRMGQCCEASRVFGEIEDPNVISWTILISGYAGVGRHDVSLGIFRQMVNV 120
Query: 350 GMVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWRP 526
GMV PDV+ALSG+LVSCR LG LASG+EIHGYGLK + FY SAGAALL LYA R
Sbjct: 121 GMVSPDVDALSGVLVSCRHLGALASGKEIHGYGLKIMCGDVFYRSAGAALLMLYAGWGRL 180
Query: 527 RDVENVFRGMDKSDVVT 577
+NVF MDKSDVVT
Sbjct: 181 DCADNVFWRMDKSDVVT 197
>XP_015954901.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like [Arachis duranensis]
Length = 641
Score = 274 bits (700), Expect = 1e-85
Identities = 139/197 (70%), Positives = 156/197 (79%), Gaps = 5/197 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR----CDPDV 169
DMYSKC V+SA +VF+EM ERDVFSWNSMMS YV NGL E A+ L GLMR C+PDV
Sbjct: 163 DMYSKCADVQSAQKVFNEMSERDVFSWNSMMSGYVSNGLFEEAVRLLGLMRASGDCEPDV 222
Query: 170 VTWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNA 349
VTWNT+MDAYC+MG C EA RVF QIKDPNVISWTTLI+GY+ V HD+AL FR+MVN
Sbjct: 223 VTWNTMMDAYCKMGRCSEALRVFHQIKDPNVISWTTLISGYAGVRRHDLALGTFRDMVNF 282
Query: 350 GMVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWRP 526
GMV PDV++LSGILVSCR LG L SG E+H YG+K + +AFY SAGAALLTLYA C R
Sbjct: 283 GMVLPDVDSLSGILVSCRFLGSLTSGNEVHCYGVKVISGDAFYKSAGAALLTLYANCGRL 342
Query: 527 RDVENVFRGMDKSDVVT 577
D ENVF MDKSDVVT
Sbjct: 343 NDAENVFDRMDKSDVVT 359
Score = 63.9 bits (154), Expect = 1e-08
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 43/235 (18%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALEL--------FGLMRC 157
D Y K G A RVF ++ + +V SW +++S Y G+ L L FG++
Sbjct: 230 DAYCKMGRCSEALRVFHQIKDPNVISWTTLISGYA--GVRRHDLALGTFRDMVNFGMVLP 287
Query: 158 DPDVVTWNTV-----------------------------------MDAYCRMGLCGEASR 232
D D ++ V + Y G +A
Sbjct: 288 DVDSLSGILVSCRFLGSLTSGNEVHCYGVKVISGDAFYKSAGAALLTLYANCGRLNDAEN 347
Query: 233 VFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLG 412
VF+++ +V++W +I G +G + A++ F+EM A V D +S +L++C
Sbjct: 348 VFDRMDKSDVVTWNAMIYGLIDMGLANEAVQCFKEM-QASNVKVDQTTVSTLLLAC---- 402
Query: 413 DLASGREIHGYGLKNNDNAFYNSAGAALLTLYARCWRPRDVENVFRGMDKSDVVT 577
DL G+E+H Y LK+ N + AL+ Y++C +VF M D+V+
Sbjct: 403 DLRRGKEMHAYVLKHRYN-WVIPVCNALIHTYSKCGCIAYAYSVFSTMAVRDLVS 456
Score = 55.8 bits (133), Expect = 8e-06
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Frame = +2
Query: 8 YSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVVTW 178
YSKCG + A VF M RD+ SWN+++S + +GL + L+L MR PD VT+
Sbjct: 433 YSKCGCIAYAYSVFSTMAVRDLVSWNTIISGFGMHGLGQTVLKLLQEMRDAGISPDSVTF 492
Query: 179 NTVMDAYCRMGLCGEASRVF-----EQIKDPNVISWTTLITGYSSVGNHDVALEIFREMV 343
++ + A GL E +F E +P ++ ++ + G LE +
Sbjct: 493 SSALSACSHSGLVNEGIELFYRMIEEFSLNPAKEHFSCVVDMLARAGR----LEDAFHFI 548
Query: 344 NAGMVFPDVEALSGILVSCRSLGDLASGR 430
N + PD +L +C+ +++ G+
Sbjct: 549 NKMPLEPDKHVWGALLAACQEHQNVSVGK 577
>XP_017410302.1 PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630 [Vigna angularis] KOM29543.1 hypothetical
protein LR48_Vigan727s000200 [Vigna angularis]
BAT75575.1 hypothetical protein VIGAN_01345300 [Vigna
angularis var. angularis]
Length = 619
Score = 272 bits (695), Expect = 3e-85
Identities = 138/198 (69%), Positives = 156/198 (78%), Gaps = 6/198 (3%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR-----CDPD 166
DMYSKCG V SA +VFDEMPERDVFSWNSMMS YVCNG P+RA+ +F +M+ C PD
Sbjct: 146 DMYSKCGDVWSATQVFDEMPERDVFSWNSMMSAYVCNGFPQRAVGVFRVMKRDGFECAPD 205
Query: 167 VVTWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVN 346
VTWNT+MDAYCRMG C EA R F +I+ PNVISWT L++GY+S G HDV+L IFREM+N
Sbjct: 206 AVTWNTLMDAYCRMGKCCEAWRAFGEIEVPNVISWTILLSGYASAGRHDVSLGIFREMMN 265
Query: 347 AGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWR 523
GMV PDV+ALSG+LVSCRSLG LASG EIHGYGLK + FY SAGAALLTLYA C R
Sbjct: 266 VGMVSPDVDALSGVLVSCRSLGALASGMEIHGYGLKIMYGDVFYRSAGAALLTLYAGCGR 325
Query: 524 PRDVENVFRGMDKSDVVT 577
+ VFR MDKSDVVT
Sbjct: 326 LDRADIVFRRMDKSDVVT 343
>XP_003551036.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 619
Score = 271 bits (694), Expect = 5e-85
Identities = 140/198 (70%), Positives = 158/198 (79%), Gaps = 6/198 (3%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR-----CDPD 166
DMYSKCG V SA +VFDEM ERDVFSWNSMMS YV NGLP +A+E+ G+M+ C+PD
Sbjct: 146 DMYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYVWNGLPHKAVEVLGVMKKDGCGCEPD 205
Query: 167 VVTWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVN 346
VVTWNTVMDAYCRMG C EASRVF +I+DPNVISWT LI+GY+ VG HDV+L IFR+MVN
Sbjct: 206 VVTWNTVMDAYCRMGQCCEASRVFGEIEDPNVISWTILISGYAGVGRHDVSLGIFRQMVN 265
Query: 347 AGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWR 523
GMV PDV+ALSG+LVSCR LG LASG+EIHGYGLK + FY SAGAALL LYA R
Sbjct: 266 VGMVSPDVDALSGVLVSCRHLGALASGKEIHGYGLKIMCGDVFYRSAGAALLMLYAGWGR 325
Query: 524 PRDVENVFRGMDKSDVVT 577
+NVF MDKSDVVT
Sbjct: 326 LDCADNVFWRMDKSDVVT 343
>XP_014506479.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vigna radiata var. radiata]
Length = 619
Score = 266 bits (680), Expect = 5e-83
Identities = 136/198 (68%), Positives = 155/198 (78%), Gaps = 6/198 (3%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR-----CDPD 166
DMYSKCG V SA +VFDEM ERDVFSWNSMMS YVCNG P+RA+E+F +M+ C PD
Sbjct: 146 DMYSKCGDVWSAIQVFDEMRERDVFSWNSMMSAYVCNGFPQRAVEVFRVMKRDGRECAPD 205
Query: 167 VVTWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVN 346
VVTWNT+MDAYCRMG C EA R F +I+ PNVISWT L++GY+S G HDV+L IFR+M+N
Sbjct: 206 VVTWNTLMDAYCRMGKCCEAWRAFGEIEVPNVISWTILMSGYASAGRHDVSLGIFRKMMN 265
Query: 347 AGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWR 523
GMV PDV+ LSG+LVSCR LG LASG EIHGYGLK + FY SAGAALLTLYA C R
Sbjct: 266 VGMVSPDVDTLSGMLVSCRCLGALASGMEIHGYGLKIMYGDVFYRSAGAALLTLYAGCGR 325
Query: 524 PRDVENVFRGMDKSDVVT 577
+ VFR MDKSDVVT
Sbjct: 326 LDRADIVFRRMDKSDVVT 343
>ONH96536.1 hypothetical protein PRUPE_7G135300 [Prunus persica]
Length = 646
Score = 247 bits (631), Expect = 2e-75
Identities = 120/196 (61%), Positives = 152/196 (77%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVV 172
DMYSKC + SA RVFDEM RD++SWNSM+S YVCNGL A+ELF M C+PD+V
Sbjct: 167 DMYSKCEDIGSAKRVFDEMVGRDLWSWNSMISGYVCNGLLGLAVELFDCMNLGGCEPDIV 226
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
T NTVMDAYCRMG C EA+R+FEQIK+PN+ISWTTLI+GYS +G+H+ +L IFR+M+ +
Sbjct: 227 TLNTVMDAYCRMGHCNEATRIFEQIKEPNIISWTTLISGYSRIGSHEASLRIFRDMIGSS 286
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNNDN-AFYNSAGAALLTLYARCWRPR 529
MV PD+++LS +LVSCR LG L +G+EIHGYG+K AFY+SAG ALLT+YA C R
Sbjct: 287 MVDPDLDSLSTVLVSCRHLGSLLNGKEIHGYGIKRESGIAFYHSAGPALLTMYANCRRIH 346
Query: 530 DVENVFRGMDKSDVVT 577
D NVF+ M+ + VV+
Sbjct: 347 DATNVFKLMNPAHVVS 362
Score = 57.0 bits (136), Expect = 3e-06
Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVVT 175
MYSKCG + SA VF M RD+ SWNSM+ + +G AL L M P+ VT
Sbjct: 435 MYSKCGCIGSAYSVFSNMINRDLVSWNSMIGGFGMHGHGRAALHLLKEMNHSGTCPNSVT 494
Query: 176 WNTVMDAYCRMGLCGEASRVF-EQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
+ +V+ A GL E +VF +K+ VI + D LE +N
Sbjct: 495 FTSVLSACSHAGLVDEGLQVFHSMMKEYGVIPSMEHYACIVDMLARDGQLEDAVSFINRM 554
Query: 353 MVFPDVEALSGILVSCRS 406
+ PD +L +C++
Sbjct: 555 PLEPDKCIWGALLAACQA 572
>XP_002277337.2 PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 246 bits (629), Expect = 3e-75
Identities = 122/196 (62%), Positives = 152/196 (77%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRC---DPDVV 172
DMYSK G V S RVFDEM ERDV SWNSM+S YVCNG E ++EL MR +PD+V
Sbjct: 167 DMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMV 226
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWNTVMDAYCRMGLC EA +FEQIK+PN+IS TTL++GYS +GNH+ +L IFREM++
Sbjct: 227 TWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRR 286
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNND-NAFYNSAGAALLTLYARCWRPR 529
+ FPD+++LS +LVSCR LG L G+EIHGYG+++ D ++FY SAGAALLT+Y +C R +
Sbjct: 287 VAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQ 346
Query: 530 DVENVFRGMDKSDVVT 577
D NVF MD+ DVVT
Sbjct: 347 DALNVFELMDRFDVVT 362
Score = 59.7 bits (143), Expect = 4e-07
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 41/233 (17%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD----PDV 169
D Y + G + A +F+++ E ++ S +++S Y G E++L +F M PD+
Sbjct: 233 DAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDL 292
Query: 170 VTWNTVMDAYCRMG--LCGE-----------------------------------ASRVF 238
+ ++V+ + +G +CG+ A VF
Sbjct: 293 DSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVF 352
Query: 239 EQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDL 418
E + +V++W +I G+ + +ALE F +M +G++ + +S +L +C DL
Sbjct: 353 ELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQI-TISTVLPAC----DL 407
Query: 419 ASGREIHGYGLKNNDNAFYNSAGAALLTLYARCWRPRDVENVFRGMDKSDVVT 577
SG+++H Y KN+ ++ AL+ +Y++C ++F M D+V+
Sbjct: 408 KSGKQVHAYITKNSFSSVI-PVWNALIHMYSKCGCIGTAYSIFSNMISRDLVS 459
>XP_008344308.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like isoform X1 [Malus domestica]
Length = 690
Score = 247 bits (630), Expect = 6e-75
Identities = 120/196 (61%), Positives = 153/196 (78%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVV 172
DMYSKC V SA +VFDEM ERD+ SWN M+S YVCNG+ A+ELF M C+PDVV
Sbjct: 219 DMYSKCKDVRSAKQVFDEMVERDJLSWNFMISGYVCNGMLGLAVELFDCMHLDVCEPDVV 278
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
T NTVMDAYCR+G C EA R+FEQIKDPN+ISWTTLI+G+S +GNH+ +L+IFR+M++
Sbjct: 279 TLNTVMDAYCRLGHCDEAKRIFEQIKDPNIISWTTLISGFSRIGNHESSLKIFRDMMDGS 338
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWRPR 529
V+PD+++LS ++VSCR LG L +G+EIHGYG+K + AFY+SAG ALL LYA C R +
Sbjct: 339 RVYPDLDSLSAVJVSCRHLGSLLNGKEIHGYGIKIGSXIAFYSSAGPALLILYANCSRIQ 398
Query: 530 DVENVFRGMDKSDVVT 577
D NVFR M+ +DVV+
Sbjct: 399 DAINVFRLMNPADVVS 414
Score = 57.4 bits (137), Expect = 2e-06
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVVT 175
MY+KCG +ESA VF M RD+ +WNSM+ + +G L L M P+ VT
Sbjct: 487 MYAKCGCIESAYSVFSNMVNRDLVTWNSMIGGFGMHGDGRAXLXLLQEMNHSGTCPNSVT 546
Query: 176 WNTVMDAYCRMGLCGEASRVF-----EQIKDPNVISWTTLITGYSSVGNHDVALEIFREM 340
+ +V+ A C GL E +VF E P++ + ++ + G + A+ M
Sbjct: 547 FTSVLSACCHSGLVDEGLQVFYSMTREYSVIPSMEHYACVVDMLARDGQLEDAVNFIHRM 606
Query: 341 VNAGMVFPDVEALSGILVSCRS 406
+ PD +L +CR+
Sbjct: 607 ----PLEPDKCIWGALLAACRA 624
>XP_015890127.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic-like [Ziziphus jujuba]
Length = 635
Score = 244 bits (623), Expect = 2e-74
Identities = 119/196 (60%), Positives = 154/196 (78%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVV 172
+MYSKC V++A RVFD + RD+ SWN M+S YV NGL E A++L MR C+PDVV
Sbjct: 164 EMYSKCMDVQNAKRVFDVIVGRDLLSWNLMISGYVYNGLLESAVKLLDRMRFDGCEPDVV 223
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWN VMDAYC+M LC EA +FE+IK+PN+ISWTTLI GYS +GNH+V+L IFR+M+++G
Sbjct: 224 TWNIVMDAYCQMRLCDEAWNIFERIKEPNIISWTTLIKGYSRIGNHEVSLRIFRDMISSG 283
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWRPR 529
M+ PD++ LSG+LVSCR LG L+ GREIH YG+K + AFYNSAGA LLT+YA+ R +
Sbjct: 284 MISPDLDCLSGVLVSCRHLGSLSGGREIHSYGIKMKSCIAFYNSAGATLLTMYAKYGRLQ 343
Query: 530 DVENVFRGMDKSDVVT 577
D +NVF+ MD++DVVT
Sbjct: 344 DAKNVFKLMDQADVVT 359
Score = 73.2 bits (178), Expect = 9e-12
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVVT 175
MYSKCG + SA+ VF M RDV SWNSMM + +GL + ALEL MR +PD +T
Sbjct: 432 MYSKCGCIRSASLVFSNMLTRDVVSWNSMMGGFRMHGLGQAALELLKEMRQSALEPDSMT 491
Query: 176 WNTVMDAYCRMGLCGEASRVFEQIK-----DPNVISWTTLITGYSSVGNHDVALEIFREM 340
+ +V+ A GL E VF ++ P++ + ++ + G A+ + M
Sbjct: 492 FTSVLSACSHSGLVNEGLEVFHKMTKYYCLTPSMEHYACIVDMLARAGRLQDAVSFIQNM 551
Query: 341 VNAGMVFPDVEALSGILVSCRS 406
+ PD +L +CRS
Sbjct: 552 ----PLEPDKSIWGTLLAACRS 569
Score = 69.7 bits (169), Expect = 1e-10
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---------- 154
MY+K G ++ A VF M + DV +WN+M+ + GL ALE F M+
Sbjct: 335 MYAKYGRLQDAKNVFKLMDQADVVTWNAMILGFADVGLEHSALECFSKMQRAGIKNDRTT 394
Query: 155 -------CDP---------------DVVT--WNTVMDAYCRMGLCGEASRVFEQIKDPNV 262
CD D+VT WN ++ Y + G AS VF + +V
Sbjct: 395 ISTVLPVCDLKSGKQIHAFIRKGCFDLVTPVWNALIYMYSKCGCIRSASLVFSNMLTRDV 454
Query: 263 ISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDLASGREI 436
+SW +++ G+ G ALE+ +EM + + PD + +L +C G + G E+
Sbjct: 455 VSWNSMMGGFRMHGLGQAALELLKEMRQSALE-PDSMTFTSVLSACSHSGLVNEGLEV 511
Score = 67.8 bits (164), Expect = 7e-10
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Frame = +2
Query: 8 YSKCGHVESAARVFDEM-------PERDVFSWNSMMSCYVCNGLPE-RALELFGLMRCDP 163
YS+ G+ E + R+F +M P+ D S ++SC L R + +G+ +
Sbjct: 263 YSRIGNHEVSLRIFRDMISSGMISPDLDCLS-GVLVSCRHLGSLSGGREIHSYGI-KMKS 320
Query: 164 DVVTWN----TVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIF 331
+ +N T++ Y + G +A VF+ + +V++W +I G++ VG ALE F
Sbjct: 321 CIAFYNSAGATLLTMYAKYGRLQDAKNVFKLMDQADVVTWNAMILGFADVGLEHSALECF 380
Query: 332 REMVNAGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNNDNAFYNSAGAALLTLYA 511
+M AG + D +S +L C DL SG++IH + ++ AL+ +Y+
Sbjct: 381 SKMQRAG-IKNDRTTISTVLPVC----DLKSGKQIHAF-IRKGCFDLVTPVWNALIYMYS 434
Query: 512 RCWRPRDVENVFRGMDKSDVVT 577
+C R VF M DVV+
Sbjct: 435 KCGCIRSASLVFSNMLTRDVVS 456
>XP_008340659.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Malus domestica]
Length = 817
Score = 247 bits (630), Expect = 5e-74
Identities = 120/196 (61%), Positives = 153/196 (78%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVV 172
DMYSKC V SA +VFDEM ERD+ SWN M+S YVCNG+ A+ELF M C+PDVV
Sbjct: 219 DMYSKCKDVRSAKQVFDEMVERDJLSWNFMISGYVCNGMLGLAVELFDCMHLDVCEPDVV 278
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
T NTVMDAYCR+G C EA R+FEQIKDPN+ISWTTLI+G+S +GNH+ +L+IFR+M++
Sbjct: 279 TLNTVMDAYCRLGHCDEAKRIFEQIKDPNIISWTTLISGFSRIGNHESSLKIFRDMMDGS 338
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWRPR 529
V+PD+++LS ++VSCR LG L +G+EIHGYG+K + AFY+SAG ALL LYA C R +
Sbjct: 339 RVYPDLDSLSAVJVSCRHLGSLLNGKEIHGYGIKIGSXIAFYSSAGPALLILYANCSRIQ 398
Query: 530 DVENVFRGMDKSDVVT 577
D NVFR M+ +DVV+
Sbjct: 399 DAINVFRLMNPADVVS 414
Score = 61.6 bits (148), Expect = 9e-08
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVVT 175
MY+KCG +ESA VF M RD+ +WNSM+ + +G ALEL M P+ VT
Sbjct: 487 MYAKCGCIESAYSVFSNMVNRDLVTWNSMIGGFGMHGDGRAALELLQEMNHSGTCPNSVT 546
Query: 176 WNTVMDAYCRMGLCGEASRVF-----EQIKDPNVISWTTLITGYSSVGNHDVALEIFREM 340
+ +V+ A C GL E +VF E P++ + ++ + G + A+ M
Sbjct: 547 FTSVLSACCHSGLVDEGLQVFYSMTREYSVIPSMEHYACVVDMLARDGQLEDAVNFIHRM 606
Query: 341 VNAGMVFPDVEALSGILVSCRS 406
+ PD +L +CR+
Sbjct: 607 ----PLEPDKCIWGALLAACRA 624
>KCW85747.1 hypothetical protein EUGRSUZ_B02507 [Eucalyptus grandis]
Length = 578
Score = 239 bits (609), Expect = 8e-73
Identities = 117/196 (59%), Positives = 144/196 (73%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRC---DPDVV 172
DMY KCGHVESA RVFDEM +RD+ SWNS+MS Y+ NGL A+EL MR DPD+V
Sbjct: 53 DMYGKCGHVESARRVFDEMGDRDLLSWNSVMSGYIWNGLHGSAVELLPAMRSEGLDPDIV 112
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWN VMDAYC+MGL EA V EQI++PN ISWTTLI+GY +G H +LE+F +MVNAG
Sbjct: 113 TWNMVMDAYCQMGLFDEARNVLEQIEEPNTISWTTLISGYCRIGKHKTSLEVFWDMVNAG 172
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNND-NAFYNSAGAALLTLYARCWRPR 529
V+PD+ LS L SCR LG L G+EIH +G+K ++FY+SAGAALLT+YA+C + +
Sbjct: 173 KVWPDIRTLSSALTSCRHLGALVIGKEIHAHGIKTESRSSFYSSAGAALLTMYAKCGKIQ 232
Query: 530 DVENVFRGMDKSDVVT 577
+ VF MDKSD VT
Sbjct: 233 EATRVFEQMDKSDFVT 248
Score = 71.2 bits (173), Expect = 4e-11
Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 41/233 (17%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLM----RCDPDV 169
D Y + G + A V +++ E + SW +++S Y G + +LE+F M + PD+
Sbjct: 119 DAYCQMGLFDEARNVLEQIEEPNTISWTTLISGYCRIGKHKTSLEVFWDMVNAGKVWPDI 178
Query: 170 VTWNTVMDA-------------------------------------YCRMGLCGEASRVF 238
T ++ + + Y + G EA+RVF
Sbjct: 179 RTLSSALTSCRHLGALVIGKEIHAHGIKTESRSSFYSSAGAALLTMYAKCGKIQEATRVF 238
Query: 239 EQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDL 418
EQ+ + ++W +I G+ +G + A+ F EM+N G+ F + +S +L C DL
Sbjct: 239 EQMDKSDFVTWNAMILGFVDLGYGNSAIVCFIEMLNLGIAFDQI-TISTLLPVC----DL 293
Query: 419 ASGREIHGYGLKNNDNAFYNSAGAALLTLYARCWRPRDVENVFRGMDKSDVVT 577
G++IH Y ++ N + AL+ +Y++ + ++F M+ D+++
Sbjct: 294 TLGKQIHAY-IQKNSSLSGVITWNALIHMYSKQGCIQSALSIFSNMETKDIIS 345
Score = 61.2 bits (147), Expect = 1e-07
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRC---DPDVVT 175
MYSK G ++SA +F M +D+ SWNS++ + +G E AL+L M+ P+ VT
Sbjct: 321 MYSKQGCIQSALSIFSNMETKDIISWNSIIGGFGMHGHGEAALQLLQEMKVSGFQPNSVT 380
Query: 176 WNTVMDAYCRMGLCGEASRVFEQIKD----PNVISWTTLITGYSSVGNHDVALEIFREMV 343
+ + A GL E R+F + P + + ++ + G + A+E+ R+M
Sbjct: 381 LTSALSACSHSGLVHEGLRLFNSMPSFGLTPAMEHFACVVDMLARAGQLEEAVELIRKMP 440
Query: 344 NAGMVFPDVEALSGILVSCRS-----LGDLASGREIHGYGLKNNDNAFYNSAGAALLTLY 508
+ PD +L +C++ + LA+ IH L+ + Y L +Y
Sbjct: 441 SP----PDKRIWGALLAACQAYHNVDVACLAAEALIH---LEPDHAGHY----VTLANIY 489
Query: 509 ARCWRPRDVENVFRGMDKSDVV 574
A+ R D V + M+ +V
Sbjct: 490 AKAGRWDDAVRVRKVMEGQKLV 511
>XP_007047218.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Theobroma cacao] EOX91375.1
Pentatricopeptide repeat-containing protein, putative
[Theobroma cacao]
Length = 635
Score = 240 bits (612), Expect = 9e-73
Identities = 117/196 (59%), Positives = 145/196 (73%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVV 172
DMY +CG + SA RVFDEM RD+FSWN M+S YV NG+ E LE+ MR D PDVV
Sbjct: 164 DMYGRCGDLTSARRVFDEMVGRDLFSWNLMISGYVGNGMLEFGLEILNCMRLDGFEPDVV 223
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWN VMD YCRMG C EA ++FE IK+PN+ISWTTLI+GYS +G H+ +L IF++M+N G
Sbjct: 224 TWNMVMDGYCRMGRCDEALKIFEYIKEPNIISWTTLISGYSRIGQHESSLRIFKDMLNKG 283
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNN-DNAFYNSAGAALLTLYARCWRPR 529
+V PD++ LS LVSCR LG L SG+EIHG+G+K +FY SAG ALLTL+++C R R
Sbjct: 284 VVLPDLDCLSSALVSCRHLGALLSGKEIHGFGIKMMIGRSFYGSAGPALLTLHSKCGRSR 343
Query: 530 DVENVFRGMDKSDVVT 577
D N+F MDKSD VT
Sbjct: 344 DAGNIFELMDKSDTVT 359
Score = 63.9 bits (154), Expect = 1e-08
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVVT 175
MYSKCG + SA VF M RD+ SWN+M+ + +GL E AL+L M P VT
Sbjct: 432 MYSKCGSIGSAYSVFSNMVARDLVSWNTMIGGFALHGLGEAALQLLKEMNYLGVCPSPVT 491
Query: 176 WNTVMDAYCRMGLCGEASRVFEQIK-----DPNVISWTTLITGYSSVGNHDVALEIFREM 340
+ + A GL E +VF + P++ + ++ S G + A+ +M
Sbjct: 492 LTSALSACNHSGLVDEGLKVFSSMTRGFHLSPSMEHFACVVDMLSRAGRLEDAINFIEKM 551
Query: 341 VNAGMVFPDVEALSGILVSCRSLG--DLASGREIHGYGLKNNDNAFYNSAGAALLTLYAR 514
+ PD +L +CR+ D+A H L+ Y L +YA+
Sbjct: 552 ----PLKPDKCIWGALLAACRAYHNIDVAKVAAEHLICLEPEQAGHY----ITLSNIYAK 603
Query: 515 CWRPRDVENVFRGMD 559
R D V + M+
Sbjct: 604 AGRWNDAVRVRKQME 618
>XP_009366958.1 PREDICTED: pentatricopeptide repeat-containing protein At5g39350
isoform X1 [Pyrus x bretschneideri]
Length = 690
Score = 240 bits (613), Expect = 2e-72
Identities = 117/196 (59%), Positives = 152/196 (77%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVV 172
DMYSKC V SA +VFDEM ERD+ SWN ++S YVCNG+ A+ELF M C+PDVV
Sbjct: 219 DMYSKCKDVRSAKQVFDEMVERDLLSWNFLISGYVCNGMLGLAVELFDCMHLDVCEPDVV 278
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
T N VMDAYCR+G C +A R+FEQIK+PN+ISWTTLI+G+S +GNH+ +L+IFR+M++
Sbjct: 279 TLNMVMDAYCRLGHCDKAKRIFEQIKEPNIISWTTLISGFSRIGNHESSLKIFRDMMDGS 338
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLK-NNDNAFYNSAGAALLTLYARCWRPR 529
V+PD+++LS +LVSCR LG L +G+EIHGYG+K + AFY+SAG ALL LYA C R +
Sbjct: 339 RVYPDLDSLSAVLVSCRHLGSLLNGKEIHGYGIKIGSGIAFYSSAGPALLILYANCSRIQ 398
Query: 530 DVENVFRGMDKSDVVT 577
D NVFR M+ +DVV+
Sbjct: 399 DAINVFRLMNPADVVS 414
Score = 58.5 bits (140), Expect = 1e-06
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVVT 175
MY+ CG +ESA VF M RD+ +WNSM+ + +G ALEL M P+ VT
Sbjct: 487 MYAICGCIESAYSVFSNMVHRDLVTWNSMIGGFGMHGDGRAALELLQEMNHSGICPNSVT 546
Query: 176 WNTVMDAYCRMGLCGEASRVFEQIKD-----PNVISWTTLITGYSSVGNHDVALEIFREM 340
+ +V+ A C GL E +VF + P++ + ++ + G + A+ M
Sbjct: 547 FTSVLSACCHSGLVDEGLQVFYSMTKKYSVIPSMEHYACVVDMLARDGQLEDAVNFIHRM 606
Query: 341 VNAGMVFPDVEALSGILVSCRS 406
+ PD +L +CR+
Sbjct: 607 ----PLEPDKCIWGALLAACRA 624
>XP_010043756.1 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Eucalyptus grandis]
Length = 640
Score = 239 bits (609), Expect = 3e-72
Identities = 117/196 (59%), Positives = 144/196 (73%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRC---DPDVV 172
DMY KCGHVESA RVFDEM +RD+ SWNS+MS Y+ NGL A+EL MR DPD+V
Sbjct: 153 DMYGKCGHVESARRVFDEMGDRDLLSWNSVMSGYIWNGLHGSAVELLPAMRSEGLDPDIV 212
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWN VMDAYC+MGL EA V EQI++PN ISWTTLI+GY +G H +LE+F +MVNAG
Sbjct: 213 TWNMVMDAYCQMGLFDEARNVLEQIEEPNTISWTTLISGYCRIGKHKTSLEVFWDMVNAG 272
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNND-NAFYNSAGAALLTLYARCWRPR 529
V+PD+ LS L SCR LG L G+EIH +G+K ++FY+SAGAALLT+YA+C + +
Sbjct: 273 KVWPDIRTLSSALTSCRHLGALVIGKEIHAHGIKTESRSSFYSSAGAALLTMYAKCGKIQ 332
Query: 530 DVENVFRGMDKSDVVT 577
+ VF MDKSD VT
Sbjct: 333 EATRVFEQMDKSDFVT 348
Score = 71.2 bits (173), Expect = 4e-11
Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 41/233 (17%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLM----RCDPDV 169
D Y + G + A V +++ E + SW +++S Y G + +LE+F M + PD+
Sbjct: 219 DAYCQMGLFDEARNVLEQIEEPNTISWTTLISGYCRIGKHKTSLEVFWDMVNAGKVWPDI 278
Query: 170 VTWNTVMDA-------------------------------------YCRMGLCGEASRVF 238
T ++ + + Y + G EA+RVF
Sbjct: 279 RTLSSALTSCRHLGALVIGKEIHAHGIKTESRSSFYSSAGAALLTMYAKCGKIQEATRVF 338
Query: 239 EQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDL 418
EQ+ + ++W +I G+ +G + A+ F EM+N G+ F + +S +L C DL
Sbjct: 339 EQMDKSDFVTWNAMILGFVDLGYGNSAIVCFIEMLNLGIAFDQI-TISTLLPVC----DL 393
Query: 419 ASGREIHGYGLKNNDNAFYNSAGAALLTLYARCWRPRDVENVFRGMDKSDVVT 577
G++IH Y ++ N + AL+ +Y++ + ++F M+ D+++
Sbjct: 394 TLGKQIHAY-IQKNSSLSGVITWNALIHMYSKQGCIQSALSIFSNMETKDIIS 445
Score = 61.2 bits (147), Expect = 1e-07
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRC---DPDVVT 175
MYSK G ++SA +F M +D+ SWNS++ + +G E AL+L M+ P+ VT
Sbjct: 421 MYSKQGCIQSALSIFSNMETKDIISWNSIIGGFGMHGHGEAALQLLQEMKVSGFQPNSVT 480
Query: 176 WNTVMDAYCRMGLCGEASRVFEQIKD----PNVISWTTLITGYSSVGNHDVALEIFREMV 343
+ + A GL E R+F + P + + ++ + G + A+E+ R+M
Sbjct: 481 LTSALSACSHSGLVHEGLRLFNSMPSFGLTPAMEHFACVVDMLARAGQLEEAVELIRKMP 540
Query: 344 NAGMVFPDVEALSGILVSCRS-----LGDLASGREIHGYGLKNNDNAFYNSAGAALLTLY 508
+ PD +L +C++ + LA+ IH L+ + Y L +Y
Sbjct: 541 SP----PDKRIWGALLAACQAYHNVDVACLAAEALIH---LEPDHAGHY----VTLANIY 589
Query: 509 ARCWRPRDVENVFRGMDKSDVV 574
A+ R D V + M+ +V
Sbjct: 590 AKAGRWDDAVRVRKVMEGQKLV 611
>EEF38749.1 pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 236 bits (602), Expect = 2e-71
Identities = 116/196 (59%), Positives = 146/196 (74%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVV 172
DMY KCG+ SA VF+EM ERD+FSWNSM+S YV NGL + A+EL MR D PDVV
Sbjct: 139 DMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVV 198
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWNT+MDAYC+MG EA V +QI+ PN+ISWTTLI+ YS +G HD++L +F++M+
Sbjct: 199 TWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIRE 258
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNNDN-AFYNSAGAALLTLYARCWRPR 529
+V PD++ L +LVSCR +G L SG+EIHGYG K N FY+SAGAALLT+YA+C R +
Sbjct: 259 VVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQ 318
Query: 530 DVENVFRGMDKSDVVT 577
D NVF MDKSD+VT
Sbjct: 319 DAINVFELMDKSDIVT 334
Score = 81.3 bits (199), Expect = 1e-14
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 35/176 (19%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---------- 154
MY+KCG ++ A VF+ M + D+ +WN+M+ +V L ++A+E F M+
Sbjct: 310 MYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTT 369
Query: 155 -------CDPD------------------VVTWNTVMDAYCRMGLCGEASRVFEQIKDPN 259
CD V WN V+ YC+ G A +F + + +
Sbjct: 370 ISTILPVCDLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKD 429
Query: 260 VISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDLASG 427
V+SW T+I G+ G+ AL++ +EM+ +G +FP+ + +L +C G + G
Sbjct: 430 VVSWNTMIGGFGMHGHGQAALKLLKEMILSG-IFPNSTTFTSVLSACSHSGLVDEG 484
Score = 63.2 bits (152), Expect = 3e-08
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVVT 175
MY KCG V SA +F MP +DV SWN+M+ + +G + AL+L M P+ T
Sbjct: 408 MYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTT 467
Query: 176 WNTVMDAYCRMGLCGEASRVFEQIKD-----PNVISWTTLITGYSSVGNHDVALEIFREM 340
+ +V+ A GL E R+F + + P + ++ ++ + G A+ +M
Sbjct: 468 FTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKM 527
Query: 341 VNAGMVFPDVEALSGILVSCRSLGDLASGR 430
+ PD +L +CR+ +L GR
Sbjct: 528 ----PLEPDKSIWGALLAACRAYQNLDFGR 553
Score = 62.8 bits (151), Expect = 3e-08
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Frame = +2
Query: 8 YSKCGHVESAARVFDEMPERDVFSWNSMMSCYV---CN--GLPERALELFGL-MRCDPDV 169
YSK G + + RVF +M R+V S + C V C G E+ G + + +
Sbjct: 238 YSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNT 297
Query: 170 VTWNT----VMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFRE 337
V +++ ++ Y + G +A VFE + ++++W +I G+ + A+E FRE
Sbjct: 298 VFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFRE 357
Query: 338 MVNAGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNNDNAFYNSAGAALLTLYARC 517
M + D +S IL C DL G IH Y K+ + + A++ +Y +C
Sbjct: 358 MQRMD-IKNDQTTISTILPVC----DLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKC 412
Query: 518 WRPRDVENVFRGMDKSDVVT 577
R +F M DVV+
Sbjct: 413 GCVRSAYTIFCSMPNKDVVS 432
>XP_002523554.2 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
chloroplastic [Ricinus communis]
Length = 636
Score = 236 bits (602), Expect = 3e-71
Identities = 116/196 (59%), Positives = 146/196 (74%), Gaps = 4/196 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVV 172
DMY KCG+ SA VF+EM ERD+FSWNSM+S YV NGL + A+EL MR D PDVV
Sbjct: 164 DMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVV 223
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
TWNT+MDAYC+MG EA V +QI+ PN+ISWTTLI+ YS +G HD++L +F++M+
Sbjct: 224 TWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIRE 283
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNNDN-AFYNSAGAALLTLYARCWRPR 529
+V PD++ L +LVSCR +G L SG+EIHGYG K N FY+SAGAALLT+YA+C R +
Sbjct: 284 VVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQ 343
Query: 530 DVENVFRGMDKSDVVT 577
D NVF MDKSD+VT
Sbjct: 344 DAINVFELMDKSDIVT 359
Score = 81.3 bits (199), Expect = 1e-14
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 35/176 (19%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---------- 154
MY+KCG ++ A VF+ M + D+ +WN+M+ +V L ++A+E F M+
Sbjct: 335 MYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTT 394
Query: 155 -------CDPD------------------VVTWNTVMDAYCRMGLCGEASRVFEQIKDPN 259
CD V WN V+ YC+ G A +F + + +
Sbjct: 395 ISTILPVCDLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKD 454
Query: 260 VISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDLASG 427
V+SW T+I G+ G+ AL++ +EM+ +G +FP+ + +L +C G + G
Sbjct: 455 VVSWNTMIGGFGMHGHGQAALKLLKEMILSG-IFPNSTTFTSVLSACSHSGLVDEG 509
Score = 63.2 bits (152), Expect = 3e-08
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD---PDVVT 175
MY KCG V SA +F MP +DV SWN+M+ + +G + AL+L M P+ T
Sbjct: 433 MYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTT 492
Query: 176 WNTVMDAYCRMGLCGEASRVFEQIKD-----PNVISWTTLITGYSSVGNHDVALEIFREM 340
+ +V+ A GL E R+F + + P + ++ ++ + G A+ +M
Sbjct: 493 FTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKM 552
Query: 341 VNAGMVFPDVEALSGILVSCRSLGDLASGR 430
+ PD +L +CR+ +L GR
Sbjct: 553 ----PLEPDKSIWGALLAACRAYQNLDFGR 578
Score = 62.8 bits (151), Expect = 3e-08
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Frame = +2
Query: 8 YSKCGHVESAARVFDEMPERDVFSWNSMMSCYV---CN--GLPERALELFGL-MRCDPDV 169
YSK G + + RVF +M R+V S + C V C G E+ G + + +
Sbjct: 263 YSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNT 322
Query: 170 VTWNT----VMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFRE 337
V +++ ++ Y + G +A VFE + ++++W +I G+ + A+E FRE
Sbjct: 323 VFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFRE 382
Query: 338 MVNAGMVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNNDNAFYNSAGAALLTLYARC 517
M + D +S IL C DL G IH Y K+ + + A++ +Y +C
Sbjct: 383 MQRMD-IKNDQTTISTILPVC----DLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKC 437
Query: 518 WRPRDVENVFRGMDKSDVVT 577
R +F M DVV+
Sbjct: 438 GCVRSAYTIFCSMPNKDVVS 457
>XP_009787964.1 PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Nicotiana sylvestris]
Length = 637
Score = 234 bits (598), Expect = 1e-70
Identities = 113/195 (57%), Positives = 147/195 (75%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 DMYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMR---CDPDVV 172
DMYSKCG ++SA RVFD M E+D+ SWN ++S YV N LP+ A+ +FGLMR C PD+V
Sbjct: 167 DMYSKCGDIQSAKRVFDLMQEKDLLSWNLIISGYVSNELPDLAVGMFGLMRMEGCQPDIV 226
Query: 173 TWNTVMDAYCRMGLCGEASRVFEQIKDPNVISWTTLITGYSSVGNHDVALEIFREMVNAG 352
T+NT+MDAYCRMG C EA ++F IKDP++ISWTTLI+GYS +G H+ AL+IFREM+N G
Sbjct: 227 TFNTIMDAYCRMGRCDEARKIFMLIKDPSIISWTTLISGYSRIGEHNHALDIFREMINRG 286
Query: 353 MVFPDVEALSGILVSCRSLGDLASGREIHGYGLKNN-DNAFYNSAGAALLTLYARCWRPR 529
V PD++ LS +L SC+ +GDL S +EIH G+K +FY S+G ALLTLY +C R +
Sbjct: 287 EVCPDLDCLSSVLASCQLIGDLRSAKEIHAQGIKVEWPFSFYRSSGPALLTLYTKCGRIQ 346
Query: 530 DVENVFRGMDKSDVV 574
D +VF MDK+DVV
Sbjct: 347 DARHVFELMDKTDVV 361
Score = 63.5 bits (153), Expect = 2e-08
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 38/182 (20%)
Frame = +2
Query: 5 MYSKCGHVESAARVFDEMPERDVFSWNSMMSCYVCNGLPERALELFGLMRCD-------- 160
+Y++CG+++SA +F E+ +R+VF+W +M+S + N L E + + M+ D
Sbjct: 67 VYAECGNIKSARYLFVELSQRNVFAWTAMLSYFSRNCLIEECVSTYREMKLDGILLDGYV 126
Query: 161 ---------------------PDVVT----WN-----TVMDAYCRMGLCGEASRVFEQIK 250
DVV WN +++D Y + G A RVF+ ++
Sbjct: 127 FPLVLKVCAKFSSLATGEQVHKDVVVCGAEWNLQVGHSLIDMYSKCGDIQSAKRVFDLMQ 186
Query: 251 DPNVISWTTLITGYSSVGNHDVALEIFREMVNAGMVFPDVEALSGILVSCRSLGDLASGR 430
+ +++SW +I+GY S D+A+ +F M G PD+ + I+ + +G R
Sbjct: 187 EKDLLSWNLIISGYVSNELPDLAVGMFGLMRMEGCQ-PDIVTFNTIMDAYCRMGRCDEAR 245
Query: 431 EI 436
+I
Sbjct: 246 KI 247