BLASTX nr result

ID: Glycyrrhiza29_contig00036944 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00036944
         (220 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003629868.1 dynamin 4C-like protein [Medicago truncatula] AET...    55   6e-07
XP_014523444.1 PREDICTED: dynamin-related protein 4C [Vigna radi...    53   3e-06

>XP_003629868.1 dynamin 4C-like protein [Medicago truncatula] AET04344.1 dynamin
           4C-like protein [Medicago truncatula]
          Length = 674

 Score = 54.7 bits (130), Expect = 6e-07
 Identities = 31/52 (59%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
 Frame = +1

Query: 73  LKMGNKSATNGTVSVNQPDES--LALVHAE-EQPQPLAVAPIVSSYNEKIRP 219
           + +GNKS+T      N+ DES  L LVH + +QPQPL++APIVSSYNEKIRP
Sbjct: 1   MTIGNKSSTKA----NKLDESSSLVLVHVDVDQPQPLSIAPIVSSYNEKIRP 48


>XP_014523444.1 PREDICTED: dynamin-related protein 4C [Vigna radiata var. radiata]
          Length = 677

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = +1

Query: 82  GNKSATNGTVSVNQPDESLALVHAEEQPQPLA-VAPIVSSYNEKIRP 219
           G KS T  + S +  +ESLALVH EEQP  LA VAPIVSSYNE+IRP
Sbjct: 4   GRKSITKASASSHGNNESLALVH-EEQPMALAIVAPIVSSYNERIRP 49


Top