BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00035372
         (842 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterran...   260   6e-76
KYP35957.1 Putative ribonuclease H protein At1g65750 family, par...   225   3e-69
GAU10809.1 hypothetical protein TSUD_424890, partial [Trifolium ...   212   2e-65
GAU43217.1 hypothetical protein TSUD_301040 [Trifolium subterran...   219   4e-64
GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterran...   197   2e-57
GAU14768.1 hypothetical protein TSUD_204170 [Trifolium subterran...   197   5e-56
GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterran...   201   2e-55
GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum]   193   7e-54
GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterran...   197   2e-53
GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterran...   191   2e-53
KYP51324.1 Putative ribonuclease H protein At1g65750 family, par...   185   1e-51
KYP70287.1 Putative ribonuclease H protein At1g65750 family [Caj...   183   1e-51
ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); ...   190   1e-51
KYP70284.1 Putative ribonuclease H protein At1g65750 family [Caj...   183   6e-51
KYP78366.1 Putative ribonuclease H protein At1g65750 family [Caj...   188   1e-50
KYP70291.1 Putative ribonuclease H protein At1g65750 family [Caj...   183   2e-50
KYP65324.1 Putative ribonuclease H protein At1g65750 family [Caj...   184   6e-50
GAU18899.1 hypothetical protein TSUD_228890 [Trifolium subterran...   186   6e-50
KYP74203.1 Putative ribonuclease H protein At1g65750 family [Caj...   181   3e-49
KYP72462.1 Putative ribonuclease H protein At1g65750 family, par...   177   3e-49

>GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterraneum]
          Length = 1147

 Score =  260 bits (664), Expect = 6e-76
 Identities = 121/280 (43%), Positives = 174/280 (62%)
 Frame = +1

Query: 1    QNISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADG 180
            QN+SLLGKL  E+ ++  KLW ++    Y +G+ +F+     GS  WN++ KA   L DG
Sbjct: 656  QNVSLLGKLIWEVSNSPGKLWVKLFIDKYTKGRHLFNVSVSGGSCIWNSLAKALHMLRDG 715

Query: 181  FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
            F +KIG+G++ FWY PW  KE L S VPFV I D +L+I DVW NG W L+ LYT +P+E
Sbjct: 716  FTFKIGNGNSRFWYDPWALKENLCSTVPFVAIQDTDLKINDVWCNGRWHLEKLYTSIPDE 775

Query: 361  VINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKLK 540
              N +  + P +VN ++D WVW   S+G Y+ + AY   +N   P   H L+W W+W+LK
Sbjct: 776  ARNYILLLQPYIVNDILDVWVWQNSSNGVYTTKDAYEWLLN-PLPINSH-LNWKWIWQLK 833

Query: 541  LPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQN 720
            LP+NIQFF+W++ H +IPT+ +L+ R + AS+ CPRC   PET++HC F C     +W+ 
Sbjct: 834  LPANIQFFVWQILHGSIPTKYILNRRRVCASNICPRCTAMPETIVHCLFACTDAIGIWRA 893

Query: 721  LGLGGYASPTNTDKGTLLQWVRDAAITQDAIIPSVLWSLW 840
             GL  +  P +TD   L  W RD   +   II  ++W +W
Sbjct: 894  CGL-EHVLPPSTDV-DLFCWCRDVGKSHGCIIFIIMWFVW 931


>KYP35957.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 307

 Score =  225 bits (574), Expect = 3e-69
 Identities = 109/279 (39%), Positives = 160/279 (57%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADGF 183
           N+++LGKL  E++  SQK+W +VL   Y+R  S+F   ++  S  WN I K    L DGF
Sbjct: 3   NVAMLGKLVWEILHGSQKMWVRVLIHKYMRHGSLFLATKKPRSPIWNAIKKTLPWLEDGF 62

Query: 184 FYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNEV 363
             K+GDG++S W+  WL KE L + V +V I D EL++ DVW    W L+AL T +  + 
Sbjct: 63  EVKLGDGASSLWFDVWLSKETLGARVRWVYISDSELKVVDVWGGSCWNLNALATTITPDQ 122

Query: 364 INKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKLKL 543
              +  ++PRLV G +D W+W   +SGTY+VR AY   +   +     +  W W+W+L L
Sbjct: 123 HESIISLSPRLVQGAIDVWIWSANTSGTYTVRKAYQWLLQ-SSLTWSVEGSWKWIWQLPL 181

Query: 544 PSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQNL 723
             NIQFF+WE+CH++IPTR  L  R I+  D CPRC    E++ HC F+C   + +W +L
Sbjct: 182 SKNIQFFLWEVCHNSIPTRGTLAQRHITNVDICPRCHEVVESIYHCLFECQLSQQLWHSL 241

Query: 724 GLGGYASPTNTDKGTLLQWVRDAAITQDAIIPSVLWSLW 840
           GL   + P N      + W++        +IP +LW  W
Sbjct: 242 GLVPPSPPLNL--VITMDWLKMLIDLHVTVIPVLLWVTW 278


>GAU10809.1 hypothetical protein TSUD_424890, partial [Trifolium subterraneum]
          Length = 218

 Score =  212 bits (540), Expect = 2e-65
 Identities = 100/208 (48%), Positives = 133/208 (63%)
 Frame = +1

Query: 1   QNISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADG 180
           QN++LLGKL  E++ +  KLW ++    YL+G+  F+     GS  WN + KA  +L DG
Sbjct: 13  QNVALLGKLIWEILQSPDKLWVRIFNDIYLKGQLPFNNNVVGGSVIWNAVKKAMSRLKDG 72

Query: 181 FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
           F +KIGDG +SFWY  W+ KE L ++VPFV I D  L+I DVW NG W L+ LYT LP  
Sbjct: 73  FKFKIGDGESSFWYDSWVLKERLCTVVPFVAIQDTALKIKDVWANGEWNLNNLYTNLPES 132

Query: 361 VINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKLK 540
           +IN +  I P LV  L D W W   +SG Y+V+ AY+   N   P  DH  +W W+W+L+
Sbjct: 133 IINVITMIQPCLVMNLPDVWTWDNSTSGVYTVKDAYNWLSN-PAPLFDHP-NWQWIWRLE 190

Query: 541 LPSNIQFFIWELCHHAIPTRAVLHARGI 624
           LP+NIQFF W+  H +IPTRAVLH R +
Sbjct: 191 LPANIQFFTWQAIHMSIPTRAVLHHRHV 218


>GAU43217.1 hypothetical protein TSUD_301040 [Trifolium subterraneum]
          Length = 565

 Score =  219 bits (559), Expect = 4e-64
 Identities = 108/255 (42%), Positives = 151/255 (59%), Gaps = 1/255 (0%)
 Frame = +1

Query: 19  GKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADGFFYKIG 198
           GKL  E++ +  KLW ++    YLRG+  F+      S  WN++ KA   L DG   KIG
Sbjct: 148 GKLIWEILQSPNKLWVRLFDDRYLRGQLPFNVKIVGVSVIWNSLAKAMHILRDGITLKIG 207

Query: 199 DGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNEVINKLQ 378
           DG++SFWY  W++KE LSS+VPFVDIHD  L+I +VW NG W L  LYT +P  V + ++
Sbjct: 208 DGNSSFWYDSWVFKEKLSSVVPFVDIHDTALKINEVWNNGEWNLQHLYTNIPQYVADAIK 267

Query: 379 QINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQL-HWAWLWKLKLPSNI 555
            +   +V+ L D W W   ++G YS + AY   I + +P   + L  W W+W+L +P+NI
Sbjct: 268 SLQQCIVSDLPDIWTWQNDNTGIYSTKDAY---IWLLDPMHINNLTGWHWIWQLCIPANI 324

Query: 556 QFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQNLGLGG 735
           QFF+W+L H +IPTRA LH R + ++D CPRC    ET+ HC F C     VW   GL  
Sbjct: 325 QFFLWQLVHESIPTRAFLHHRHVCSTDLCPRCSAAAETIDHCLFLCADSVSVWNMCGL-- 382

Query: 736 YASPTNTDKGTLLQW 780
           +A P +      + W
Sbjct: 383 HAIPYSLQSTDRISW 397


>GAU22731.1 hypothetical protein TSUD_138560 [Trifolium subterraneum]
          Length = 385

 Score =  197 bits (502), Expect = 2e-57
 Identities = 91/281 (32%), Positives = 157/281 (55%), Gaps = 2/281 (0%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADGF 183
           N +LLGKL   +  +   LW Q++   Y++        +++GS TWN+I+KA   + DGF
Sbjct: 41  NTALLGKLVWNIHQDKDVLWVQIMKHKYVKDDIFITITKKQGSVTWNSIMKALLAIKDGF 100

Query: 184 FYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNEV 363
            +++GDG++SFWYT W     L++ V +VDIHD+++R+ DV++ G + L++LYT +P E+
Sbjct: 101 QFRLGDGNSSFWYTNWSGCGILANQVMYVDIHDLQMRVRDVYIYGKFNLNSLYTHIPPEI 160

Query: 364 INKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIE-NPQQDHQLHWAWLWKLK 540
           +N L  +   L   + D + W    +G Y+ +  YH    ++        + W+WLW ++
Sbjct: 161 VNHLNLLPVCLNPRVADRYTWKGNLNGLYTAQDGYHWLNRVKPTNSSTKDISWSWLWHIE 220

Query: 541 LPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQN 720
            P  I+FF+W   H+++PTRA+L  RG+ +   CP C+   ET +HC  DC  ++ +W+ 
Sbjct: 221 APEKIKFFLWTALHNSLPTRAMLSHRGLLSVYACPMCNAAEETTMHCLRDCEFIKHLWKT 280

Query: 721 LGLGGYASPTNTDKGTLLQWVRDAAITQDA-IIPSVLWSLW 840
           +   GY   T      L  W+R    +    +  + +W +W
Sbjct: 281 I---GYTDQTFFQGDNLYAWLRKGCDSPSMFMFLAAVWWIW 318


>GAU14768.1 hypothetical protein TSUD_204170 [Trifolium subterraneum]
          Length = 503

 Score =  197 bits (500), Expect = 5e-56
 Identities = 93/254 (36%), Positives = 139/254 (54%), Gaps = 2/254 (0%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADGF 183
           N ++LGKL  +L   S K W  +L   YL         ++ GS  WN+I KA   L DGF
Sbjct: 107 NTAMLGKLVWDLQQQSDKPWVHMLQDKYLDSSHFLTSKRKFGSPIWNSISKAKLALLDGF 166

Query: 184 FYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNEV 363
            Y+IGDG++SFWY+PW+ ++PL   + +V I D +LR+ D++ N SW L+ LYT L  ++
Sbjct: 167 HYRIGDGNSSFWYSPWISRDPLCKSLDYVAIQDSQLRLKDIFFNDSWHLNQLYTPLTTDM 226

Query: 364 INKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKLKL 543
            N +   +  L  G++D + W     G Y+  S Y   +  +     +   W W+W L+ 
Sbjct: 227 KNLISHYHLILNIGVLDCFTWNGSLDGVYTASSGYSWLLK-KKQHNPNNKSWKWIWNLRA 285

Query: 544 PSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQNL 723
           P  I+F IW +CH++IPT  +LH R ++  + C RC  + ET LHC  DCP    +W  +
Sbjct: 286 PEKIKFLIWCICHNSIPTLDMLHHRHLAQDNICSRCLANVETTLHCLRDCPDAARIWDAI 345

Query: 724 GL--GGYASPTNTD 759
           G   G + S  N D
Sbjct: 346 GFRNGDFYSQMNLD 359


>GAU50504.1 hypothetical protein TSUD_409790 [Trifolium subterraneum]
          Length = 902

 Score =  201 bits (512), Expect = 2e-55
 Identities = 96/263 (36%), Positives = 155/263 (58%), Gaps = 3/263 (1%)
 Frame = +1

Query: 1    QNISLLGKLASELVDNSQKLWAQVLAGFYLRGKS-IFDPLQRKGSTTWNNILKASKQLAD 177
            QNISLLGKL  ++V +S KLW  +L+  Y++G + +       GS TW++I++A   L D
Sbjct: 588  QNISLLGKLVWDMVQSSNKLWVDLLSSKYVKGSTFLLSGNNSSGSPTWSSIIQAKNILKD 647

Query: 178  GFFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPN 357
            GF ++ G G++SFW + W     L +LVP++DIHD++L I DV    S     LYT+LP 
Sbjct: 648  GFSWRAGSGTSSFWSSHWTTLGQLGALVPYIDIHDLQLSIKDVLSTNSPHTHILYTQLPP 707

Query: 358  EVINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDH--QLHWAWLW 531
             V + +  I+ +  + + D ++W    +G+Y+ +S Y+  ++++N    H   L W+W+W
Sbjct: 708  SVSDLINNIHIKFNDSIDDAFIWTSNKNGSYTTKSGYNWLLSLQNLVTPHNPSLSWSWIW 767

Query: 532  KLKLPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPV 711
            KL+LP  I+FF W  CH+++PT ++L+ R ++ S TC RC    ET LHC  DC     +
Sbjct: 768  KLQLPEKIKFFFWLACHNSVPTLSLLNHRKMNLSATCARCGLREETFLHCVRDCDFSISI 827

Query: 712  WQNLGLGGYASPTNTDKGTLLQW 780
            W ++G       ++ D    L+W
Sbjct: 828  WHHIGFDNPYFFSSMDAHDWLKW 850


>GAU25827.1 hypothetical protein TSUD_30910 [Trifolium subterraneum]
          Length = 592

 Score =  193 bits (490), Expect = 7e-54
 Identities = 97/283 (34%), Positives = 159/283 (56%), Gaps = 4/283 (1%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIF-DPLQRKGSTTWNNILKASKQLADG 180
           NISLL K   ++V +S KLW  +L+  Y  GK++        GS+TW++I++A   L +G
Sbjct: 124 NISLLEKHVWDMVQSSSKLWVDLLSSKYTAGKNLLLTSNPSSGSSTWSSIIRAKDILKEG 183

Query: 181 FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
           F ++   GS+SFW+TPW     L SLVP+VDIHD++L + DV   G+    +LYT+LP  
Sbjct: 184 FSWRADSGSSSFWFTPWTALGRLGSLVPYVDIHDLQLSVKDVLSIGNPHTQSLYTQLPPL 243

Query: 361 VINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDH--QLHWAWLWK 534
             + +   N +  + + D ++W    + TY+ +S Y+  +++ +   +H     W+W+WK
Sbjct: 244 ASDIVNNANFKFNDSIEDAFIWTNNKNDTYTTKSGYNWLLSLRDLVINHNPSHSWSWIWK 303

Query: 535 LKLPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVW 714
           ++LP  I+FF W  CH+ +PT ++L+ R +S S TC RC    E+ LHC  DC   R +W
Sbjct: 304 IQLPEKIKFFFWLACHNFVPTLSLLNHRKMSHSATCTRCGLQDESFLHCIRDCEFARSLW 363

Query: 715 QNLGLGGYASPTNTDKGTLLQWVR-DAAITQDAIIPSVLWSLW 840
            ++G       +N D   +  W++  A  +Q     + +W  W
Sbjct: 364 NHIGFNNMDFFSNMD---VYDWLKLGATGSQTTTFSTGVWWSW 403


>GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterraneum]
          Length = 1375

 Score =  197 bits (500), Expect = 2e-53
 Identities = 88/241 (36%), Positives = 143/241 (59%), Gaps = 1/241 (0%)
 Frame = +1

Query: 4    NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADGF 183
            N SLLGKL   +  N   LW QVL   YL     F   ++ GS TWN I+KA + L DGF
Sbjct: 1000 NTSLLGKLVWHMHQNCDTLWVQVLRHKYLNDDMFFSITKKSGSITWNAIMKALQALKDGF 1059

Query: 184  FYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNEV 363
             +++GDG++SFWY+ W     L+  VP+VDIHD+++R+ DV+ N  W  + LYT +P +V
Sbjct: 1060 QFRLGDGNSSFWYSNWSGIGNLADQVPYVDIHDLQMRVRDVYTNNKWNFNLLYTTIPADV 1119

Query: 364  INKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQD-HQLHWAWLWKLK 540
            ++ ++++   L + +VD + W    +G Y+ +  Y+          D   + W W+W + 
Sbjct: 1120 MDHVKRLPVCLNSQVVDRYTWKGNLNGLYTAKEGYYWLNRFAFSDTDTDDISWNWVWHIP 1179

Query: 541  LPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQN 720
             P  I+FFIW   H+A+PT+++L  RG+  ++ CPRC+ + E+ LHC  +C  ++  W++
Sbjct: 1180 APEKIKFFIWSALHNALPTKSMLSHRGLLQANLCPRCNIEEESTLHCLRNCEFIKRFWKS 1239

Query: 721  L 723
            +
Sbjct: 1240 I 1240


>GAU50297.1 hypothetical protein TSUD_288310 [Trifolium subterraneum]
          Length = 545

 Score =  191 bits (484), Expect = 2e-53
 Identities = 91/281 (32%), Positives = 155/281 (55%), Gaps = 2/281 (0%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADGF 183
           N SLLGKL   +  N    W Q+L   YL         ++ GS TWN I+KA + L DGF
Sbjct: 57  NTSLLGKLVWHMHQNCDTFWLQILRHKYLNDDMFLSITKKPGSITWNAIMKALQALKDGF 116

Query: 184 FYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNEV 363
            +++GDG++SFWY  WL    L+  VP+VDIHD+++R+ DV+ +  W  + LYT +P +V
Sbjct: 117 QFRLGDGNSSFWYLNWLGIGNLADQVPYVDIHDLQMRVRDVYTDNKWNFNLLYTTIPADV 176

Query: 364 INKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIE-NPQQDHQLHWAWLWKLK 540
           ++ L+++   L + +VD + W    +G Y+ +  Y+       +      + W  +W + 
Sbjct: 177 MDHLKRLPVCLNSQVVDRYTWKGNLNGLYTAKEGYYWLNRFSFSDTATDDISWNSVWHIP 236

Query: 541 LPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQN 720
            P  I+FFIW   H+A+PT+++L  RG+  ++ CPRC+ + E+ LHC  +C  ++  W+ 
Sbjct: 237 APEKIKFFIWSALHNALPTKSMLSHRGLLQANLCPRCNIEEESTLHCLRNCEFIKRFWKA 296

Query: 721 LGLGGYASPTNTDKGTLLQWVRDAAITQDA-IIPSVLWSLW 840
           +   G+   T      L  W+R++     + +  + +W +W
Sbjct: 297 I---GFLGQTFFQGDNLNDWLRNSIDGPSSFLFMAAVWWIW 334


>KYP51324.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 483

 Score =  185 bits (469), Expect = 1e-51
 Identities = 101/281 (35%), Positives = 149/281 (53%), Gaps = 2/281 (0%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKG-STTWNNILKASKQLADG 180
           N +LLGKLA +L  N   LW Q+L   YL+GKS+F    R G S  W NI++A   + DG
Sbjct: 1   NNALLGKLAWKLCINEDCLWVQLLKHKYLQGKSMFTIKARPGDSCIWRNIVQAFVSIKDG 60

Query: 181 FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
           F++K+G G TSFW+  WL   PLS+ V  +   D+ L + DV +N +W L  L T LP E
Sbjct: 61  FYFKLGAGDTSFWFDDWLGFGPLSNRVGLIHPSDILLNVKDVILNDNWNLSRLQTNLPVE 120

Query: 361 VINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKLK 540
           V+ ++  + P LV+   D W W    +G Y+  +AY  F+  +N     +  W  LWKL 
Sbjct: 121 VLTRIANVRPLLVHETQDNWCWRPNGTGLYTAATAY-KFLLCDNITGVGRGRWKTLWKLS 179

Query: 541 LPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQN 720
           +P  I+ F+W     A+PT  +   R ++AS +CP C    + +LHC  DC   R VW+ 
Sbjct: 180 IPEKIKMFLWLAFRTALPTNQLRFQRHLAASASCPCCLTRDKDILHCLRDCHHAREVWKR 239

Query: 721 LGLGGYASPTNTDKGTLLQWVRDAAITQDAIIPSV-LWSLW 840
           LG     +   T+   ++ W+        + + SV  W +W
Sbjct: 240 LGFSTLPAFNATN---VVSWIESMIYGDHSTLFSVAAWWIW 277


>KYP70287.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 425

 Score =  183 bits (465), Expect = 1e-51
 Identities = 102/283 (36%), Positives = 150/283 (53%), Gaps = 4/283 (1%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKG-STTWNNILKASKQLADG 180
           N+SLLGKL  +++   QK W  +L+  YL G+SI     ++G S  W++I+KA   L +G
Sbjct: 94  NVSLLGKLVWDMLSAPQKPWVNLLSSLYLHGESILCAQNKRGASPIWSSIMKALPSLREG 153

Query: 181 FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
           F   +G G++S WYT W         VPFV I D    + D WV+G W  +ALYT LP E
Sbjct: 154 FQPYLGSGASSLWYTDWSGNGLWCGKVPFVHIADTNKTVADCWVSGQWSFNALYTVLPTE 213

Query: 361 VINKLQQINPRLVNGL--VDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWK 534
           ++N +QQ+  R+ N    +D +VW   +SG Y+  S YH          +    W  LWK
Sbjct: 214 LMNSVQQL--RVANSPLGLDHFVWRSDTSGCYTAASGYHFL--TPGLAAEGDAVWKKLWK 269

Query: 535 LKLPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVW 714
           + +P  ++FF+W+  H A+PT  V   R +S S  C RC    +T+LH   DCP  R V 
Sbjct: 270 IMIPEKVKFFLWQCLHLALPTNQVRADRRLSESGACSRCSCPQKTILHALRDCPYSREV- 328

Query: 715 QNLGLGGYASPTNTDKGTLLQWVRDAAITQDAIIPSV-LWSLW 840
             L  GG +   +       QW++   + ++AI  S+ LW +W
Sbjct: 329 --LMSGGCSRGWSFSVMDCFQWLKGIILHKEAITLSITLWWVW 369


>ABO80459.1 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 869

 Score =  190 bits (483), Expect = 1e-51
 Identities = 102/282 (36%), Positives = 151/282 (53%), Gaps = 3/282 (1%)
 Frame = +1

Query: 4    NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDP-LQRKGSTTWNNILKASKQLADG 180
            N  LLGKL  EL  N  KLW  +LA  Y  G ++ +  +    S  W++I++A   L  G
Sbjct: 381  NTCLLGKLVWELFHNKHKLWVSLLAAKYTAGPNLLNASITSSSSPIWSSIIRAKNVLISG 440

Query: 181  FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
            + ++ G GS+SFW+T W    PL SLVP +DIHD+ L + DV  N    L  LYT LP  
Sbjct: 441  YSWRPGSGSSSFWFTHWSEFGPLCSLVPIIDIHDLHLTVKDVISNNQRSL-MLYTPLPQA 499

Query: 361  VINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLH-WAWLWKL 537
            V + +  IN R  + + D ++W    +GTYS +S Y   +++     D+  H W+W+ K 
Sbjct: 500  VTDCINTINFRFNDAIEDVFIWPHNKNGTYSAKSGYQWLLSLSG--NDNNTHSWSWILKK 557

Query: 538  KLPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQ 717
            K+    +F IW  CH ++PT A+LH R I AS TC RC    E++ HC  DCP  + +W 
Sbjct: 558  KISEKYKFLIWLACHDSLPTAALLHHRQIIASATCARCGVSDESVFHCIRDCPFSKIIWH 617

Query: 718  NLGLGGYASPTNTDKGTLLQWVRDAAITQDAII-PSVLWSLW 840
            ++   G++ P       +  W +   I   AI+  + LW +W
Sbjct: 618  HI---GFSEPYFFAVTDIEIWCKSGLIGSKAILFAAGLWWIW 656


>KYP70284.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 499

 Score =  183 bits (465), Expect = 6e-51
 Identities = 102/283 (36%), Positives = 150/283 (53%), Gaps = 4/283 (1%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKG-STTWNNILKASKQLADG 180
           N+SLLGKL  +++   QK W  +L+  YL G+SI     ++G S  W++I+KA   L +G
Sbjct: 58  NVSLLGKLVWDMLSAPQKPWVNLLSSLYLHGESILCAQNKRGASPIWSSIMKALPSLREG 117

Query: 181 FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
           F   +G G++S WYT W         VPFV I D    + D WV+G W  +ALYT LP E
Sbjct: 118 FQPYLGSGASSLWYTDWSGNGLWCGKVPFVHIADTNKTVADCWVSGQWSFNALYTVLPTE 177

Query: 361 VINKLQQINPRLVNGL--VDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWK 534
           ++N +QQ+  R+ N    +D +VW   +SG Y+  S YH          +    W  LWK
Sbjct: 178 LMNSVQQL--RVANSPLGLDHFVWRSDTSGCYTAASGYHFL--TPGLAAEGDAVWKKLWK 233

Query: 535 LKLPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVW 714
           + +P  ++FF+W+  H A+PT  V   R +S S  C RC    +T+LH   DCP  R V 
Sbjct: 234 IMIPEKVKFFLWQCLHLALPTNQVRADRRLSESGACSRCSCPQKTILHALRDCPYSREV- 292

Query: 715 QNLGLGGYASPTNTDKGTLLQWVRDAAITQDAIIPSV-LWSLW 840
             L  GG +   +       QW++   + ++AI  S+ LW +W
Sbjct: 293 --LMSGGCSRGWSFSVMDCFQWLKGIILHKEAITLSITLWWVW 333


>KYP78366.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1090

 Score =  188 bits (478), Expect = 1e-50
 Identities = 95/280 (33%), Positives = 147/280 (52%)
 Frame = +1

Query: 1    QNISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADG 180
            +N+SLLGKL  +L+    K W  +++  YL   SI    +++GS  W +I+KA   L  G
Sbjct: 603  KNVSLLGKLVWDLLQGHDKFWVSIMSKKYLLSDSILKCQKKQGSYVWRSIIKARDFLLSG 662

Query: 181  FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
            F  K+G+   SFW+  W  + PL   V  +D+HD+E+R+ DVW    W L +L+T L  +
Sbjct: 663  FKLKLGNRDVSFWFKDWTGEGPLCERVWAIDVHDLEMRVRDVWNEEGWNLSSLWTSLSKD 722

Query: 361  VINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKLK 540
              + L +    L  GL D  VW    +G YS +S Y+ ++  E  QQ  +  W W+WK+ 
Sbjct: 723  FNHVLLKQTLLLSEGLHDCIVWKPDLTGNYSAKSGYN-WLTFEPEQQPSEDKWLWIWKIY 781

Query: 541  LPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQN 720
             P NI+FF+W   H + PT +++  R I  +D C +C    ET++HCF D  +V+ VW+ 
Sbjct: 782  APENIKFFLWLAWHDSFPTSSLIFERHILGNDKCRQCGSQEETVMHCFRDSHEVQEVWRI 841

Query: 721  LGLGGYASPTNTDKGTLLQWVRDAAITQDAIIPSVLWSLW 840
            L     +  T +       WV        A+  S +W +W
Sbjct: 842  LQF--VSCDTFSQIDNFKMWVIHGIKLGGALFLSTIWEIW 879


>KYP70291.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 550

 Score =  183 bits (465), Expect = 2e-50
 Identities = 102/283 (36%), Positives = 150/283 (53%), Gaps = 4/283 (1%)
 Frame = +1

Query: 4    NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKG-STTWNNILKASKQLADG 180
            N+SLLGKL  +++   QK W  +L+  YL G+SI     ++G S  W++I+KA   L +G
Sbjct: 215  NVSLLGKLVWDMLSAPQKPWVNLLSSLYLHGESILCAQNKRGASPIWSSIMKALPSLREG 274

Query: 181  FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
            F   +G G++S WYT W         VPFV I D    + D WV+G W  +ALYT LP E
Sbjct: 275  FQPYLGSGASSLWYTDWSGNGLWCGKVPFVHIADTNKTVADCWVSGQWSFNALYTVLPTE 334

Query: 361  VINKLQQINPRLVNGL--VDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWK 534
            ++N +QQ+  R+ N    +D +VW   +SG Y+  S YH          +    W  LWK
Sbjct: 335  LMNSVQQL--RVANSPLGLDHFVWRSDTSGCYTAASGYHFL--TPGLAAEGDAVWKKLWK 390

Query: 535  LKLPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVW 714
            + +P  ++FF+W+  H A+PT  V   R +S S  C RC    +T+LH   DCP  R V 
Sbjct: 391  IMIPEKVKFFLWQCLHLALPTNQVRADRRLSESGACSRCSCPQKTILHALRDCPYSREV- 449

Query: 715  QNLGLGGYASPTNTDKGTLLQWVRDAAITQDAIIPSV-LWSLW 840
              L  GG +   +       QW++   + ++AI  S+ LW +W
Sbjct: 450  --LMSGGCSRGWSFSVMDCFQWLKGIILHKEAITLSITLWWVW 490


>KYP65324.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 729

 Score =  184 bits (468), Expect = 6e-50
 Identities = 102/287 (35%), Positives = 147/287 (51%), Gaps = 8/287 (2%)
 Frame = +1

Query: 4    NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKG-STTWNNILKASKQLADG 180
            NISL+GKL  +L+ + QK W ++L   YL G S+    +  G S  WN+I+KA   L  G
Sbjct: 256  NISLIGKLIWDLLHSPQKPWVKILQAKYLHGASVLQAKKANGASQVWNSIVKALPYLRQG 315

Query: 181  FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
            FF K+G G++S WY  WL   PL   VP+V I D +  +   W  G+W  D+L+TRLP E
Sbjct: 316  FFPKLGAGNSSLWYEDWLGTGPLCREVPYVHISDTDRIVAHCWQQGAWNFDSLFTRLPME 375

Query: 361  VINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKLK 540
            ++N++QQ+         D + W   SSG Y+  S +    + ++   D    W  +WKL 
Sbjct: 376  LVNRIQQVPIPSSPAGADMFSWAGDSSGCYTAASGFRFLFSPDHGLADPV--WKRVWKLH 433

Query: 541  LPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQN 720
            +P  I+F +W+  H +IPT      R + +  +CPRC    ET+LH   DCP  R VW  
Sbjct: 434  VPEKIKFLLWQGLHSSIPTNHFCSLRHLDSVGSCPRCSCPQETILHAIRDCPHSREVWLQ 493

Query: 721  LGLGGYASPTNTDKGTLLQ-----WVRDAAITQDAI--IPSVLWSLW 840
            +G        NT     LQ     W +   IT  A   +  V+W +W
Sbjct: 494  VG--------NTPSQIFLQMDCFTWFK-GVITNPASKKLAIVIWWIW 531


>GAU18899.1 hypothetical protein TSUD_228890 [Trifolium subterraneum]
          Length = 1098

 Score =  186 bits (473), Expect = 6e-50
 Identities = 93/281 (33%), Positives = 147/281 (52%), Gaps = 2/281 (0%)
 Frame = +1

Query: 4    NISLLGKLASELVDNSQKLWAQVLAGFYLRG-KSIFDPLQRKGSTTWNNILKASKQLADG 180
            NI LLGKL  +L+ +  KLW  +L+  Y  G K ++   Q+  S TW++I++    L DG
Sbjct: 609  NICLLGKLVWDLLQSKNKLWVNILSHRYTAGFKLLYVNAQQTSSHTWSSIVRTKDILKDG 668

Query: 181  FFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNE 360
            F ++ G GS+SFWY PW     L + V +VDIHDV+L + DV+         LYT LP  
Sbjct: 669  FSWRAGSGSSSFWYCPWSSLGLLGNSVSYVDIHDVQLTVKDVFGGSFPYSQILYTHLPQA 728

Query: 361  VINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKLK 540
             ++ +   +      L D +VW    +G Y+ +S Y   ++ +         W+W+WK+ 
Sbjct: 729  ALDIINNTHLTFNESLADVFVWNHNKNGVYTAKSGYDWLLSRQEQVIGPFHSWSWIWKIT 788

Query: 541  LPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQN 720
             P  ++   W  CH A+PT A+LH R I++S  CPRC    ET LHC  DC   + VW  
Sbjct: 789  GPEKLKILFWLACHEAVPTLAMLHHRNIASSPICPRCSNHNETFLHCVRDCIHSKTVWDQ 848

Query: 721  LGLGGYASPTNTDKGTLLQWVRDAAIT-QDAIIPSVLWSLW 840
            L   G+ + +  D     +W++ +  + +  +  + +W +W
Sbjct: 849  L---GFTNSSFFDSTMAHEWLKHSYFSPRRLLFLAGVWWIW 886


>KYP74203.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 611

 Score =  181 bits (459), Expect = 3e-49
 Identities = 97/282 (34%), Positives = 145/282 (51%), Gaps = 3/282 (1%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTT--WNNILKASKQLAD 177
           NISLLGKL   L+     LW ++L   YLRG+ I   L   GS +     I++A+ ++ D
Sbjct: 122 NISLLGKLVWGLLVGKPSLWREILEHKYLRGRCILS-LTSTGSMSNIMRGIVRATHEIRD 180

Query: 178 GFFYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPN 357
           GF  + GDG++SFW+  W   + L + VP+V I D E +I DVW +GSW  ++LYT +P+
Sbjct: 181 GFKIRFGDGNSSFWFDSWSAMDRLCNHVPYVHISDTERKINDVWKDGSWDWNSLYTLVPD 240

Query: 358 EVINKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKL 537
            + + L Q++      + D W W   + G YS  S Y    N +N     +  W W+WK+
Sbjct: 241 NIKDMLNQVDIMGFGNVPDVWSWTARTDGEYSAASGYKWLCN-KNRPLPAEGEWLWIWKI 299

Query: 538 KLPSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQ 717
           K P  ++  IW + H A+PT      RG++ S  C RC  D E++LHC  DC   + +W 
Sbjct: 300 KCPEKVKVIIWLMLHVAVPTNLFRFNRGLALSPLCVRCGEDTESVLHCMRDCKYSKALWL 359

Query: 718 NLGLGGYASPTNTDKGTLLQWV-RDAAITQDAIIPSVLWSLW 840
             G     S  N     +  W+ R     Q +   +V+W  W
Sbjct: 360 QFGF----SNINFFNHEVRTWIQRGVNSAQCSKFLAVMWWTW 397


>KYP72462.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 444

 Score =  177 bits (450), Expect = 3e-49
 Identities = 87/241 (36%), Positives = 130/241 (53%)
 Frame = +1

Query: 4   NISLLGKLASELVDNSQKLWAQVLAGFYLRGKSIFDPLQRKGSTTWNNILKASKQLADGF 183
           NISL+GKL  +++ + QK W ++L   YL G+S+        S  WN+I+KA   L  GF
Sbjct: 25  NISLIGKLIWDVLHSPQKPWVKILQAKYLHGESVLHAKNNDASQVWNSIVKALPFLRQGF 84

Query: 184 FYKIGDGSTSFWYTPWLYKEPLSSLVPFVDIHDVELRICDVWVNGSWQLDALYTRLPNEV 363
           + K+G G++S WY  WL   PL   VP+V I D +  +   W  G+W  D+L+TRLP E+
Sbjct: 85  YPKLGAGNSSLWYEDWLGSGPLCREVPYVHISDTDRTVAQCWQQGAWNFDSLFTRLPMEL 144

Query: 364 INKLQQINPRLVNGLVDTWVWGECSSGTYSVRSAYHMFINIENPQQDHQLHWAWLWKLKL 543
            N++QQ+         D + W   SSG Y+  S++   ++ ++   D    W  +WKL +
Sbjct: 145 ANRIQQVPIPSSPAGADMFSWAGDSSGCYTAASSFRFLLSPDHGLVDP--IWKRVWKLPV 202

Query: 544 PSNIQFFIWELCHHAIPTRAVLHARGISASDTCPRCDRDPETMLHCFFDCPQVRPVWQNL 723
           P  I+F +W+  H +IPT      R + +  + PRC    ET LH   DCP  R VW  +
Sbjct: 203 PKKIKFLLWQGLHSSIPTNHFRSLRHLDSVGSFPRCSYPQETTLHAIRDCPHSREVWLQV 262

Query: 724 G 726
           G
Sbjct: 263 G 263