BLASTX nr result
ID: Glycyrrhiza29_contig00034491
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00034491
(220 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EPI87924.1 putative glucitol/sorbitol permease IIC component [Sa... 86 7e-19
KYE07160.1 PTS glucitol/sorbitol transporter subunit IIC, partia... 79 7e-18
EPJ12607.1 glucitol/sorbitol permease IIC component [Salmonella ... 81 2e-17
CNU28037.1 Uncharacterised protein [Salmonella enterica subsp. e... 77 4e-17
ACN46967.1 PTS system, glucitol/sorbitol-specific IIBC component... 79 2e-16
AJQ75229.1 Glucitol/sorbitol permease IIC component [Salmonella ... 79 2e-16
AIE06761.1 PTS system protein [Salmonella enterica subsp. enteri... 79 2e-16
EMR52379.1 glucitol/sorbitol permease IIC component [Salmonella ... 79 2e-16
EHB43001.1 PTS system, glucitol/sorbitol-specific, IIC component... 79 2e-16
ABX20093.1 hypothetical protein SARI_00140 [Salmonella enterica ... 79 2e-16
AEW74945.1 hypothetical protein EcWSU1_03517 [Enterobacter cloac... 74 8e-15
ESC31892.1 hypothetical protein SEEACDC3_17691 [Salmonella enter... 70 2e-14
ELN90813.1 PTS system glucitol/sorbitol-specific transporter sub... 70 2e-14
WP_072114108.1 PTS glucose transporter subunit IIA, partial [Shi... 70 2e-14
WP_072109243.1 PTS glucose transporter subunit IIA, partial [Shi... 70 2e-14
WP_072111335.1 PTS glucose transporter subunit IIA, partial [Shi... 70 2e-14
WP_072117592.1 PTS glucose transporter subunit IIA, partial [Shi... 70 2e-14
KUD64607.1 PTS system glucitol/sorbitol-specific transporter sub... 70 3e-14
WP_072107121.1 PTS glucose transporter subunit IIA, partial [Shi... 70 3e-14
WP_072106731.1 PTS glucose transporter subunit IIA, partial [Shi... 70 3e-14
>EPI87924.1 putative glucitol/sorbitol permease IIC component [Salmonella
enterica subsp. enterica serovar Enteritidis str.
2009K1651]
Length = 259
Score = 86.3 bits (212), Expect = 7e-19
Identities = 45/66 (68%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 FLSLRDLINTLKPFKVIIISRR*T-KTNALQERRMIETITHGAEWFIGLFQKGGEVFTGM 199
FL D NT + F +I ++R+ K LQER MIETITHGAEWFIGLFQKGGEVFTGM
Sbjct: 39 FLLFCDHNNTFESFNMITMNRKLARKLKTLQERTMIETITHGAEWFIGLFQKGGEVFTGM 98
Query: 200 VTGILP 217
VTGILP
Sbjct: 99 VTGILP 104
>KYE07160.1 PTS glucitol/sorbitol transporter subunit IIC, partial [Salmonella
enterica subsp. enterica serovar Typhimurium]
Length = 74
Score = 79.0 bits (193), Expect = 7e-18
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = +2
Query: 95 KTNALQERRMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
K LQER MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 11 KLKTLQERTMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 51
>EPJ12607.1 glucitol/sorbitol permease IIC component [Salmonella enterica
subsp. enterica serovar Enteritidis str. 2010K-0286]
Length = 206
Score = 81.3 bits (199), Expect = 2e-17
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = +2
Query: 95 KTNALQERRMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
K N LQER MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 11 KLNTLQERTMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 51
>CNU28037.1 Uncharacterised protein [Salmonella enterica subsp. enterica
serovar Bovismorbificans]
Length = 68
Score = 77.0 bits (188), Expect = 4e-17
Identities = 40/59 (67%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -2
Query: 216 GRIPVTMPVKTSPPF*NSPMNHSAPWVMVSIILLSCRAFVFV-YLRLIIITLKGFKVLI 43
GRIPVT+PV TSPPF N+PMNHSAP VMVSII+LSCR F F+ I+I LK KVL+
Sbjct: 10 GRIPVTIPVNTSPPFWNNPMNHSAPCVMVSIIVLSCRVFSFLANFLFIVIMLKDSKVLL 68
>ACN46967.1 PTS system, glucitol/sorbitol-specific IIBC component [Salmonella
enterica subsp. enterica serovar Paratyphi C str.
RKS4594] ADX18613.1 PTS system,
glucitol/sorbitol-specific IIBC component [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74] AGS30892.1 Glucitol/sorbitol permease IIC
component [Salmonella enterica subsp. enterica serovar
Newport str. USMARC-S3124.1] AJQ70833.1
Glucitol/sorbitol permease IIC component [Salmonella
enterica subsp. enterica serovar Newport str.
USDA-ARS-USMARC-1927] AKD09474.1 Glucitol/sorbitol
permease IIC component [Salmonella enterica subsp.
enterica serovar Typhimurium str. CDC 2011K-0870]
AKD16784.1 Glucitol/sorbitol permease IIC component
[Salmonella enterica subsp. enterica serovar Newport
str. CDC 2010K-2159]
Length = 203
Score = 79.0 bits (193), Expect = 2e-16
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = +2
Query: 95 KTNALQERRMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
K LQER MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 8 KLKTLQERTMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 48
>AJQ75229.1 Glucitol/sorbitol permease IIC component [Salmonella enterica
subsp. enterica serovar Montevideo str.
USDA-ARS-USMARC-1903] AKD11622.1 Glucitol/sorbitol
permease IIC component [Salmonella enterica subsp.
enterica serovar Montevideo str. USDA-ARS-USMARC-1921]
Length = 206
Score = 79.0 bits (193), Expect = 2e-16
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = +2
Query: 95 KTNALQERRMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
K LQER MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 11 KLKTLQERTMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 51
>AIE06761.1 PTS system protein [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 206
Score = 79.0 bits (193), Expect = 2e-16
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = +2
Query: 95 KTNALQERRMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
K LQER MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 11 KLKTLQERTMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 51
>EMR52379.1 glucitol/sorbitol permease IIC component [Salmonella enterica
subsp. enterica serovar Dublin str. UC16] EPI66732.1
glucitol/sorbitol permease IIC component [Salmonella
enterica subsp. enterica serovar Dublin str. DG22]
EPI67822.1 glucitol/sorbitol permease IIC component
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 2009K0958] EPI73951.1 glucitol/sorbitol permease
IIC component [Salmonella enterica subsp. enterica
serovar Enteritidis str. 08-1080] EPI83249.1
glucitol/sorbitol permease IIC component [Salmonella
enterica subsp. enterica serovar Enteritidis str.
2010K-0262] EPI92301.1 glucitol/sorbitol permease IIC
component [Salmonella enterica subsp. enterica serovar
Enteritidis str. 2009K1726] EPJ01508.1 glucitol/sorbitol
permease IIC component [Salmonella enterica subsp.
enterica serovar Enteritidis str. 2010K-0267] EPJ03260.1
glucitol/sorbitol permease IIC component [Salmonella
enterica subsp. enterica serovar Enteritidis str.
2010K-0271] EPJ06519.1 glucitol/sorbitol permease IIC
component [Salmonella enterica subsp. enterica serovar
Enteritidis str. 2010K-0284] ETA89228.1
glucitol/sorbitol permease IIC component [Salmonella
enterica subsp. enterica serovar Cubana str. 76814]
Length = 206
Score = 79.0 bits (193), Expect = 2e-16
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = +2
Query: 95 KTNALQERRMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
K LQER MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 11 KLKTLQERTMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 51
>EHB43001.1 PTS system, glucitol/sorbitol-specific, IIC component [Salmonella
enterica subsp. enterica serovar Infantis str. SARB27]
Length = 206
Score = 79.0 bits (193), Expect = 2e-16
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = +2
Query: 95 KTNALQERRMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
K LQER MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 11 KLKTLQERTMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 51
>ABX20093.1 hypothetical protein SARI_00140 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 206
Score = 79.0 bits (193), Expect = 2e-16
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = +2
Query: 95 KTNALQERRMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
K LQER MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 11 KLKTLQERTMIETITHGAEWFIGLFQKGGEVFTGMVTGILP 51
>AEW74945.1 hypothetical protein EcWSU1_03517 [Enterobacter cloacae EcWSU1]
Length = 192
Score = 74.3 bits (181), Expect = 8e-15
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = -1
Query: 217 GQDPGHHAGEDLAAFLKQPDEPLGAVGDGFYHSSLL*G 104
GQDPGHHAGE +AFL+QPDEPLGAVGDGFYHSSLL G
Sbjct: 150 GQDPGHHAGEHFSAFLEQPDEPLGAVGDGFYHSSLLWG 187
>ESC31892.1 hypothetical protein SEEACDC3_17691 [Salmonella enterica subsp.
enterica serovar Agona str. SA-3]
Length = 82
Score = 70.5 bits (171), Expect = 2e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 122 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 1 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 32
>ELN90813.1 PTS system glucitol/sorbitol-specific transporter subunit IIC
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 22558] EYH86324.1 PTS system
glucitol/sorbitol-specific transporter subunit IIC
[Salmonella enterica subsp. enterica serovar Heidelberg
str. N4403] KJT89911.1 PTS system
glucitol/sorbitol-specific transporter subunit IIC
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 77-2823] KJU06827.1 PTS system
glucitol/sorbitol-specific transporter subunit IIC
[Salmonella enterica subsp. enterica serovar Heidelberg
str. 77-1831]
Length = 82
Score = 70.5 bits (171), Expect = 2e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 122 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 1 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 32
>WP_072114108.1 PTS glucose transporter subunit IIA, partial [Shigella sonnei]
Length = 86
Score = 70.5 bits (171), Expect = 2e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 122 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 1 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 32
>WP_072109243.1 PTS glucose transporter subunit IIA, partial [Shigella sonnei]
Length = 88
Score = 70.5 bits (171), Expect = 2e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 122 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 1 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 32
>WP_072111335.1 PTS glucose transporter subunit IIA, partial [Shigella sonnei]
Length = 89
Score = 70.5 bits (171), Expect = 2e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 122 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 1 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 32
>WP_072117592.1 PTS glucose transporter subunit IIA, partial [Shigella sonnei]
Length = 90
Score = 70.5 bits (171), Expect = 2e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 122 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 1 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 32
>KUD64607.1 PTS system glucitol/sorbitol-specific transporter subunit IIC,
partial [Salmonella enterica subsp. enterica serovar
Typhimurium]
Length = 94
Score = 70.5 bits (171), Expect = 3e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 122 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 1 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 32
>WP_072107121.1 PTS glucose transporter subunit IIA, partial [Shigella sonnei]
Length = 100
Score = 70.5 bits (171), Expect = 3e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 122 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 1 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 32
>WP_072106731.1 PTS glucose transporter subunit IIA, partial [Shigella sonnei]
Length = 103
Score = 70.5 bits (171), Expect = 3e-14
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 122 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 217
MIETITHGAEWFIGLFQKGGEVFTGMVTGILP
Sbjct: 1 MIETITHGAEWFIGLFQKGGEVFTGMVTGILP 32