BLASTX nr result

ID: Glycyrrhiza29_contig00034383 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00034383
         (201 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGJ83729.1 gag-pol polyprotein, partial [Caragana korshinskii]        112   2e-27
CAC95126.1 gag-pol polyprotein [Populus deltoides]                     91   1e-19
XP_019427158.1 PREDICTED: uncharacterized protein LOC109335479 [...    82   1e-16
XP_006380728.1 hypothetical protein POPTR_0007s11590g [Populus t...    60   9e-10
CAN69462.1 hypothetical protein VITISV_002919 [Vitis vinifera]         56   2e-07
GAU43000.1 hypothetical protein TSUD_188740 [Trifolium subterran...    51   1e-05

>AGJ83729.1 gag-pol polyprotein, partial [Caragana korshinskii]
          Length = 732

 Score =  112 bits (280), Expect = 2e-27
 Identities = 56/66 (84%), Positives = 60/66 (90%), Gaps = 1/66 (1%)
 Frame = +2

Query: 2   PAVVDPCP-RYPPRFRKSTQLPDFVYSTYSTSFVSFLTSIYSLSEPSSYKEAILDPLWQQ 178
           PA+VDP P RYP R RKSTQLPDFVYSTYS SFVSFL+SI+SLSEPSSY+EAILDPLWQQ
Sbjct: 340 PAIVDPPPPRYPSRHRKSTQLPDFVYSTYSASFVSFLSSIHSLSEPSSYEEAILDPLWQQ 399

Query: 179 AMTEEL 196
           AM EEL
Sbjct: 400 AMAEEL 405


>CAC95126.1 gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 90.5 bits (223), Expect = 1e-19
 Identities = 46/64 (71%), Positives = 50/64 (78%)
 Frame = +2

Query: 8    VVDPCPRYPPRFRKSTQLPDFVYSTYSTSFVSFLTSIYSLSEPSSYKEAILDPLWQQAMT 187
            +VDP PR   R RKST+LPDF YS YS+SF SFL  I+ L EPSSYKEAILDPL QQAM 
Sbjct: 833  IVDPPPRQSIRIRKSTKLPDFAYSCYSSSFTSFLAYIHCLFEPSSYKEAILDPLGQQAMD 892

Query: 188  EELS 199
            EELS
Sbjct: 893  EELS 896


>XP_019427158.1 PREDICTED: uncharacterized protein LOC109335479 [Lupinus
           angustifolius]
          Length = 749

 Score = 81.6 bits (200), Expect = 1e-16
 Identities = 37/50 (74%), Positives = 42/50 (84%)
 Frame = +2

Query: 26  RYPPRFRKSTQLPDFVYSTYSTSFVSFLTSIYSLSEPSSYKEAILDPLWQ 175
           RYP R  KSTQLPDFVY+ YST F S LTS++ LSEPSSY+EA+LDPLWQ
Sbjct: 700 RYPQRIHKSTQLPDFVYNIYSTYFASALTSLHGLSEPSSYQEAVLDPLWQ 749


>XP_006380728.1 hypothetical protein POPTR_0007s11590g [Populus trichocarpa]
           ERP58525.1 hypothetical protein POPTR_0007s11590g
           [Populus trichocarpa]
          Length = 154

 Score = 60.1 bits (144), Expect = 9e-10
 Identities = 32/51 (62%), Positives = 36/51 (70%)
 Frame = +2

Query: 47  KSTQLPDFVYSTYSTSFVSFLTSIYSLSEPSSYKEAILDPLWQQAMTEELS 199
           KS +L  FVYS YS+SF  FL  I+ LS+PSSYKEAI  P  QQAM EE S
Sbjct: 97  KSIKLSYFVYSCYSSSFTLFLAFIHYLSKPSSYKEAIFYPFLQQAMDEEFS 147


>CAN69462.1 hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +2

Query: 8   VVDPCPR-YPPRFRKSTQLPDFVYSTYSTSFVSFLTSIYSLSEPSSYKE 151
           + DP P  YP R  KST+L +F YS YS SF SFL S+++L EP+SY E
Sbjct: 607 IADPLPSXYPKRICKSTKLQNFAYSCYSLSFTSFLASLHNLCEPTSYTE 655


>GAU43000.1 hypothetical protein TSUD_188740 [Trifolium subterraneum]
          Length = 1160

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
 Frame = +2

Query: 2   PAVVDPCPRYPPRFRK---STQLPD------FVYSTYSTSFVSFLTSIYSLSEPSSYKEA 154
           P    P P +P   RK   S++ P+        Y   STS+VSF++++ S+S P S  EA
Sbjct: 480 PPATSPAPEHPIALRKGIRSSRHPNPKYACVLNYDRLSTSYVSFVSALDSVSIPKSTGEA 539

Query: 155 ILDPLWQQAMTEELS 199
           + DP W+QAM EE++
Sbjct: 540 MADPNWRQAMVEEMA 554


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