BLASTX nr result
ID: Glycyrrhiza29_contig00034219
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00034219
(214 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SDD92973.1 efflux transporter, outer membrane factor (OMF) lipop... 86 5e-18
WP_018271712.1 RND transporter [Bradyrhizobium elkanii] 86 5e-18
ERF85827.1 NodT family efflux transporter, outer membrane factor... 85 1e-17
SEC06814.1 efflux transporter, outer membrane factor (OMF) lipop... 80 4e-16
WP_074126466.1 RND transporter [Bradyrhizobium sp. NAS96.2] OKO8... 77 7e-15
WP_063790076.1 MULTISPECIES: RND transporter [Bradyrhizobium] OM... 75 3e-14
WP_051003147.1 RND transporter [Bradyrhizobium elkanii] 74 6e-14
WP_051447775.1 RND transporter [Bradyrhizobium elkanii] 73 2e-13
WP_050999531.1 RND transporter [Bradyrhizobium elkanii] OIM92172... 73 2e-13
WP_063695431.1 RND transporter [Bradyrhizobium embrapense] 72 4e-13
WP_076859502.1 RND transporter [Bradyrhizobium sp. SEMIA 6399] 72 6e-13
WP_050626469.1 RND transporter [Bradyrhizobium viridifuturi] 72 6e-13
WP_050384553.1 RND transporter [Bradyrhizobium pachyrhizi] 70 3e-12
WP_028331917.1 RND transporter [Bradyrhizobium elkanii] 70 3e-12
WP_065732847.1 RND transporter [Bradyrhizobium icense] ANW05729.... 63 5e-10
WP_057838297.1 RND transporter [Bradyrhizobium jicamae] KRR02051... 63 5e-10
WP_057861523.1 RND transporter [Bradyrhizobium lablabi] KRR18618... 63 5e-10
WP_065756335.1 RND transporter [Bradyrhizobium paxllaeri] OCK573... 62 2e-09
WP_068736442.1 RND transporter [Tardiphaga sp. Vaf07] KZD21376.1... 61 3e-09
WP_074278672.1 RND transporter [Bradyrhizobium erythrophlei] 61 4e-09
>SDD92973.1 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT
family [Bradyrhizobium sp. R5]
Length = 496
Score = 85.9 bits (211), Expect = 5e-18
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = -1
Query: 196 VTQPASVMVPEXXXXXXXXXXXXXXRSIIALGLIVGCAGCILTQDIPDPALDVPQGYKAA 17
+TQP SVMVP RS++ALGL+ GCAGCILTQDIPDPALDVPQGYKAA
Sbjct: 1 MTQPMSVMVPGGRFGLAVRARRLAGRSLVALGLVAGCAGCILTQDIPDPALDVPQGYKAA 60
Query: 16 RLERP 2
RL RP
Sbjct: 61 RLGRP 65
>WP_018271712.1 RND transporter [Bradyrhizobium elkanii]
Length = 498
Score = 85.9 bits (211), Expect = 5e-18
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = -1
Query: 199 GVTQPASVMVPEXXXXXXXXXXXXXXRSIIALGLIVGCAGCILTQDIPDPALDVPQGYKA 20
GVTQP SVMVP RS++ALGL VG AGCILTQDIPDPALDVPQGYKA
Sbjct: 2 GVTQPVSVMVPGGRFGLAVRARRLAGRSLVALGLAVGSAGCILTQDIPDPALDVPQGYKA 61
Query: 19 ARLERP 2
ARL RP
Sbjct: 62 ARLGRP 67
>ERF85827.1 NodT family efflux transporter, outer membrane factor (OMF)
lipoprotein [Bradyrhizobium sp. DFCI-1]
Length = 496
Score = 84.7 bits (208), Expect = 1e-17
Identities = 44/65 (67%), Positives = 47/65 (72%)
Frame = -1
Query: 196 VTQPASVMVPEXXXXXXXXXXXXXXRSIIALGLIVGCAGCILTQDIPDPALDVPQGYKAA 17
+TQPASVMVP RSI+ALGL+ G AGCILTQDIPDPALDVPQGYKAA
Sbjct: 1 MTQPASVMVPGGRFGLAGRLGRLAGRSIVALGLVAGSAGCILTQDIPDPALDVPQGYKAA 60
Query: 16 RLERP 2
RL RP
Sbjct: 61 RLGRP 65
>SEC06814.1 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT
family [Bradyrhizobium erythrophlei]
Length = 496
Score = 80.5 bits (197), Expect = 4e-16
Identities = 41/65 (63%), Positives = 46/65 (70%)
Frame = -1
Query: 196 VTQPASVMVPEXXXXXXXXXXXXXXRSIIALGLIVGCAGCILTQDIPDPALDVPQGYKAA 17
+TQ ASVMVP RS++A+GL+ G AGCILTQDIPDPALDVPQGYKAA
Sbjct: 1 MTQSASVMVPGGRFGLAVRMRRLAGRSVVAIGLVAGSAGCILTQDIPDPALDVPQGYKAA 60
Query: 16 RLERP 2
RL RP
Sbjct: 61 RLGRP 65
>WP_074126466.1 RND transporter [Bradyrhizobium sp. NAS96.2] OKO80638.1 RND
transporter [Bradyrhizobium sp. NAS96.2]
Length = 496
Score = 77.0 bits (188), Expect = 7e-15
Identities = 41/64 (64%), Positives = 44/64 (68%)
Frame = -1
Query: 196 VTQPASVMVPEXXXXXXXXXXXXXXRSIIALGLIVGCAGCILTQDIPDPALDVPQGYKAA 17
+TQ ASV VP RS+IALGL+ G AGCILTQDIPDPALDVPQGYKAA
Sbjct: 1 MTQQASVTVPRGRFGLTVRVRRLAGRSLIALGLVAGSAGCILTQDIPDPALDVPQGYKAA 60
Query: 16 RLER 5
RL R
Sbjct: 61 RLGR 64
>WP_063790076.1 MULTISPECIES: RND transporter [Bradyrhizobium] OMI07344.1 RND
transporter [Bradyrhizobium sp. UFLA 03-321]
Length = 489
Score = 75.1 bits (183), Expect = 3e-14
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S++ALGL GCAGCILTQDIPDPALDVPQGYKAARL RP
Sbjct: 20 SLVALGLAAGCAGCILTQDIPDPALDVPQGYKAARLGRP 58
>WP_051003147.1 RND transporter [Bradyrhizobium elkanii]
Length = 489
Score = 74.3 bits (181), Expect = 6e-14
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S++ALGL+VG AGCILTQDIPDPALDVPQGYKAARL RP
Sbjct: 20 SLVALGLVVGSAGCILTQDIPDPALDVPQGYKAARLGRP 58
>WP_051447775.1 RND transporter [Bradyrhizobium elkanii]
Length = 489
Score = 72.8 bits (177), Expect = 2e-13
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S++ALGL+ G AGCILTQDIPDPALDVPQGYKAARL RP
Sbjct: 20 SLVALGLVAGSAGCILTQDIPDPALDVPQGYKAARLGRP 58
>WP_050999531.1 RND transporter [Bradyrhizobium elkanii] OIM92172.1 RND transporter
[Bradyrhizobium elkanii]
Length = 489
Score = 72.8 bits (177), Expect = 2e-13
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S++ALGL VG AGCILTQDIPDPALDVPQGYKAARL RP
Sbjct: 20 SLVALGLAVGSAGCILTQDIPDPALDVPQGYKAARLGRP 58
>WP_063695431.1 RND transporter [Bradyrhizobium embrapense]
Length = 489
Score = 72.0 bits (175), Expect = 4e-13
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S++ALGL+VG AGCILTQDIPDPALDVPQGYKAA++ RP
Sbjct: 20 SLVALGLVVGSAGCILTQDIPDPALDVPQGYKAAQIGRP 58
>WP_076859502.1 RND transporter [Bradyrhizobium sp. SEMIA 6399]
Length = 489
Score = 71.6 bits (174), Expect = 6e-13
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
+++ALGL+ G AGCILTQDIPDPALDVPQGYKAARL RP
Sbjct: 20 ALVALGLVAGSAGCILTQDIPDPALDVPQGYKAARLGRP 58
>WP_050626469.1 RND transporter [Bradyrhizobium viridifuturi]
Length = 489
Score = 71.6 bits (174), Expect = 6e-13
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
+++ALGL+ G AGCILTQDIPDPALDVPQGYKAARL RP
Sbjct: 20 ALVALGLVAGSAGCILTQDIPDPALDVPQGYKAARLGRP 58
>WP_050384553.1 RND transporter [Bradyrhizobium pachyrhizi]
Length = 489
Score = 69.7 bits (169), Expect = 3e-12
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S++ALGL+ G AGCILTQDIPD ALDVPQGYKAARL RP
Sbjct: 20 SLVALGLVAGSAGCILTQDIPDSALDVPQGYKAARLGRP 58
>WP_028331917.1 RND transporter [Bradyrhizobium elkanii]
Length = 489
Score = 69.7 bits (169), Expect = 3e-12
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S++ALGL+ G AGCILTQDIPD ALDVPQGYKAARL RP
Sbjct: 20 SLVALGLVAGSAGCILTQDIPDSALDVPQGYKAARLGRP 58
>WP_065732847.1 RND transporter [Bradyrhizobium icense] ANW05729.1 RND transporter
[Bradyrhizobium icense]
Length = 486
Score = 63.2 bits (152), Expect = 5e-10
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S +GL+V AGCILT+D+PDPALD+P+GYKAARL +P
Sbjct: 17 SFAVIGLVVSSAGCILTKDLPDPALDIPEGYKAARLSKP 55
>WP_057838297.1 RND transporter [Bradyrhizobium jicamae] KRR02051.1 RND transporter
[Bradyrhizobium jicamae]
Length = 489
Score = 63.2 bits (152), Expect = 5e-10
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S+ LGL+ AGCILT+D+PDPALD+P+GYKAARL +P
Sbjct: 20 SLAVLGLVASSAGCILTKDLPDPALDIPEGYKAARLSKP 58
>WP_057861523.1 RND transporter [Bradyrhizobium lablabi] KRR18618.1 RND transporter
[Bradyrhizobium lablabi]
Length = 491
Score = 63.2 bits (152), Expect = 5e-10
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S+ LGL+ AGCILT+D+PDPALD+P+GYKAARL +P
Sbjct: 22 SLAVLGLVASSAGCILTKDLPDPALDIPEGYKAARLSKP 60
>WP_065756335.1 RND transporter [Bradyrhizobium paxllaeri] OCK57377.1 RND
transporter [Bradyrhizobium paxllaeri]
Length = 479
Score = 61.6 bits (148), Expect = 2e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
S+ LG + AGCILT+D+PDPALD+P+GYKAARL +P
Sbjct: 10 SLAVLGFVASSAGCILTKDLPDPALDIPEGYKAARLSKP 48
>WP_068736442.1 RND transporter [Tardiphaga sp. Vaf07] KZD21376.1 RND transporter
[Tardiphaga sp. Vaf07]
Length = 481
Score = 60.8 bits (146), Expect = 3e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARLERP 2
SI+A ++ AGCILT+D+PDPALD+P+GYKAARL P
Sbjct: 12 SIVAFAVVASSAGCILTKDLPDPALDIPEGYKAARLANP 50
>WP_074278672.1 RND transporter [Bradyrhizobium erythrophlei]
Length = 491
Score = 60.8 bits (146), Expect = 4e-09
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -1
Query: 118 SIIALGLIVGCAGCILTQDIPDPALDVPQGYKAARL 11
S+ LGL+ AGCILTQDIPDPALDVP GYKAARL
Sbjct: 22 SLAVLGLVASSAGCILTQDIPDPALDVPGGYKAARL 57