BLASTX nr result

ID: Glycyrrhiza29_contig00034186 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00034186
         (315 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SHK04332.1 Uncharacterized conserved protein, contains a C-termi...    56   5e-07
WP_028154874.1 autotransporter domain-containing protein [Bradyr...    56   7e-07
SEM24676.1 Uncharacterized conserved protein, contains a C-termi...    55   2e-06
SHH76007.1 T5SS/PEP-CTERM-associated repeat-containing protein [...    52   5e-06
CUU19012.1 Bll7882 protein CDS [Bradyrhizobium sp.]                    52   5e-06
WP_063986412.1 autotransporter domain-containing protein [Bradyr...    52   5e-06
SEI09051.1 T5SS/PEP-CTERM-associated repeat-containing protein [...    52   8e-06
SHH28780.1 T5SS/PEP-CTERM-associated repeat-containing protein [...    53   9e-06

>SHK04332.1 Uncharacterized conserved protein, contains a C-terminal
           beta-barrel porin domain [Bradyrhizobium lablabi]
          Length = 979

 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = +3

Query: 213 G*RFVSPWMSLGVTPYAAGQFTTFDLPA 296
           G RFV+PWM++G+TPYAAGQFTTFDLPA
Sbjct: 826 GYRFVTPWMAMGITPYAAGQFTTFDLPA 853


>WP_028154874.1 autotransporter domain-containing protein [Bradyrhizobium
           japonicum] KGT75902.1 outer membrane autotransporter
           barrel [Bradyrhizobium japonicum]
          Length = 641

 Score = 55.8 bits (133), Expect = 7e-07
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = +3

Query: 213 G*RFVSPWMSLGVTPYAAGQFTTFDLPA 296
           G RFVSPWM +GVTPY AGQFTTFDLPA
Sbjct: 488 GYRFVSPWMGIGVTPYVAGQFTTFDLPA 515


>SEM24676.1 Uncharacterized conserved protein, contains a C-terminal beta-barrel
            porin domain [Bradyrhizobium sp. OK095]
          Length = 1160

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = +3

Query: 213  G*RFVSPWMSLGVTPYAAGQFTTFDLPA 296
            G RFVSPWM +G+TPYAAGQFTTF+LPA
Sbjct: 1003 GYRFVSPWMGVGITPYAAGQFTTFNLPA 1030


>SHH76007.1 T5SS/PEP-CTERM-associated repeat-containing protein [Bradyrhizobium
            erythrophlei]
          Length = 1249

 Score = 52.4 bits (124), Expect(2) = 5e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%), Gaps = 1/29 (3%)
 Frame = +3

Query: 213  G*RFVSPWMS-LGVTPYAAGQFTTFDLPA 296
            G RFVSPWM  +G+TPYAAGQFTTFDLPA
Sbjct: 1095 GYRFVSPWMGGIGITPYAAGQFTTFDLPA 1123



 Score = 25.0 bits (53), Expect(2) = 5e-06
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 179  SCNAFSGRVEGG 214
            + NAFSGRVEGG
Sbjct: 1084 NANAFSGRVEGG 1095


>CUU19012.1 Bll7882 protein CDS [Bradyrhizobium sp.]
          Length = 1034

 Score = 52.4 bits (124), Expect(2) = 5e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%), Gaps = 1/29 (3%)
 Frame = +3

Query: 213 G*RFVSPWMS-LGVTPYAAGQFTTFDLPA 296
           G RFVSPWM  +G+TPYAAGQFTTFDLPA
Sbjct: 880 GYRFVSPWMGGIGITPYAAGQFTTFDLPA 908



 Score = 25.0 bits (53), Expect(2) = 5e-06
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 179 SCNAFSGRVEGG 214
           + NAFSGRVEGG
Sbjct: 869 NANAFSGRVEGG 880


>WP_063986412.1 autotransporter domain-containing protein [Bradyrhizobium sp. G22]
          Length = 1011

 Score = 52.4 bits (124), Expect(2) = 5e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%), Gaps = 1/29 (3%)
 Frame = +3

Query: 213 G*RFVSPWMS-LGVTPYAAGQFTTFDLPA 296
           G RFVSPWM  +G+TPYAAGQFTTFDLPA
Sbjct: 857 GYRFVSPWMGGIGITPYAAGQFTTFDLPA 885



 Score = 25.0 bits (53), Expect(2) = 5e-06
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 179 SCNAFSGRVEGG 214
           + NAFSGRVEGG
Sbjct: 846 NANAFSGRVEGG 857


>SEI09051.1 T5SS/PEP-CTERM-associated repeat-containing protein [Tardiphaga sp.
            OK245]
          Length = 1421

 Score = 51.6 bits (122), Expect(2) = 8e-06
 Identities = 24/31 (77%), Positives = 26/31 (83%), Gaps = 3/31 (9%)
 Frame = +3

Query: 213  G*RFVSPWMS---LGVTPYAAGQFTTFDLPA 296
            G RFVSPWM    +G+TPYAAGQFTTFDLPA
Sbjct: 1265 GYRFVSPWMGGIGIGITPYAAGQFTTFDLPA 1295



 Score = 25.0 bits (53), Expect(2) = 8e-06
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 179  SCNAFSGRVEGG 214
            + NAFSGRVEGG
Sbjct: 1254 NANAFSGRVEGG 1265


>SHH28780.1 T5SS/PEP-CTERM-associated repeat-containing protein [Bradyrhizobium
           erythrophlei]
          Length = 991

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 24/32 (75%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = +3

Query: 204 SRAG*RFVSPWMS-LGVTPYAAGQFTTFDLPA 296
           +  G RFVSPWM  +G+TPYAAGQFTTFDLPA
Sbjct: 834 AEGGYRFVSPWMGGIGITPYAAGQFTTFDLPA 865


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