BLASTX nr result
ID: Glycyrrhiza29_contig00033826
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00033826
(368 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KHN20047.1 Putative ribonuclease H protein, partial [Glycine soja] 95 1e-21
KHN21319.1 Putative ribonuclease H protein, partial [Glycine soja] 86 8e-19
XP_019433102.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 86 6e-17
KYP43520.1 Putative ribonuclease H protein At1g65750 family [Caj... 82 2e-16
KHN34212.1 Putative ribonuclease H protein [Glycine soja] 77 2e-15
GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterran... 78 6e-15
ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); ... 79 8e-15
KYP63977.1 Putative ribonuclease H protein At1g65750 family, par... 76 1e-14
GAU48983.1 hypothetical protein TSUD_245740 [Trifolium subterran... 76 2e-14
KYP62168.1 Putative ribonuclease H protein At1g65750 family [Caj... 75 3e-14
KYP54574.1 Putative ribonuclease H protein At1g65750 family [Caj... 75 3e-14
KYP76854.1 Putative ribonuclease H protein At1g65750 [Cajanus ca... 71 5e-14
KYP69590.1 Transposon TX1 uncharacterized, partial [Cajanus cajan] 69 1e-13
KYP61060.1 Putative ribonuclease H protein At1g65750 family [Caj... 66 1e-13
KYP61720.1 Putative ribonuclease H protein At1g65750 family, par... 76 1e-13
KYP45819.1 Putative ribonuclease H protein At1g65750 family, par... 72 1e-13
KYP45885.1 Putative ribonuclease H protein At1g65750 family [Caj... 75 2e-13
GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterran... 75 2e-13
KYP65324.1 Putative ribonuclease H protein At1g65750 family [Caj... 75 2e-13
KYP56389.1 Putative ribonuclease H protein At1g65750 family [Caj... 74 3e-13
>KHN20047.1 Putative ribonuclease H protein, partial [Glycine soja]
Length = 220
Score = 94.7 bits (234), Expect = 1e-21
Identities = 52/113 (46%), Positives = 67/113 (59%)
Frame = -3
Query: 339 WLESWAS*QGRVHVTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSSHWVK 160
W + + GRV TLANSV+ +IP Y M N W P+ IC ID VR FIWG +SHWV
Sbjct: 33 WKQKLLNRAGRV--TLANSVISAIPTYVMHNCWRPEGICHQIDQTVRGFIWGSSTSHWVP 90
Query: 159 WNMITQPRTRGG*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKYLH 1
W ITQ R RGG LG + E K + +NP+KLWV+++ +KYL+
Sbjct: 91 WETITQSRARGG-LGV-RKAREANISLLGKHIWEVIHNPDKLWVKLMTNKYLN 141
>KHN21319.1 Putative ribonuclease H protein, partial [Glycine soja]
Length = 161
Score = 85.9 bits (211), Expect = 8e-19
Identities = 40/72 (55%), Positives = 47/72 (65%)
Frame = -3
Query: 339 WLESWAS*QGRVHVTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSSHWVK 160
W + S GR TLA SVL SIPIY MQN WLP +CD ID +FIWG +HWVK
Sbjct: 82 WKMNMLSCAGRT--TLAKSVLNSIPIYHMQNLWLPTGVCDEIDRVTHTFIWGYTKNHWVK 139
Query: 159 WNMITQPRTRGG 124
W++I +PR RGG
Sbjct: 140 WDVIIRPRNRGG 151
>XP_019433102.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC109340000 [Lupinus angustifolius]
Length = 1805
Score = 85.5 bits (210), Expect = 6e-17
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = -3
Query: 303 HVTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSSHWVKWNMITQPRTRGG 124
HVTLA SVL SIPIYSMQN WLP IC+ +D+ VR FI GG S+HWV W IT + +GG
Sbjct: 146 HVTLAKSVLASIPIYSMQNNWLPTCICNKLDASVRQFIRGGNSNHWVNWRSITHTKDKGG 205
>KYP43520.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 282
Score = 82.4 bits (202), Expect = 2e-16
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = -3
Query: 339 WLESWAS*QGRVHVTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSSHWVK 160
W S S GRV LA+S++ +IP Y M N WLPQ +CD ID C+R+FIWGG HW
Sbjct: 132 WKMSLISKAGRV--VLASSIMNTIPNYIMHNLWLPQSVCDDIDKCIRTFIWGGHHKHWAN 189
Query: 159 WNMITQPRTRGG 124
W ++T+ + GG
Sbjct: 190 WEVVTKSKKDGG 201
>KHN34212.1 Putative ribonuclease H protein [Glycine soja]
Length = 149
Score = 76.6 bits (187), Expect = 2e-15
Identities = 40/84 (47%), Positives = 50/84 (59%)
Frame = -3
Query: 255 MQNYWLPQVICDSIDSCVRSFIWGGPSSHWVKWNMITQPRTRGG*LGYPQDPGEQYCINR 76
MQN +LPQ +CD+ID R FIWG P SHWV WN I+ PR+ GG LG + E
Sbjct: 1 MQNLFLPQGVCDAIDRISRQFIWGSPPSHWVDWNTISLPRSNGG-LGI-RPTREASVALH 58
Query: 75 EKCLAPYPYNPNKLWVQVLISKYL 4
K + ++P KLWVQ+ KYL
Sbjct: 59 GKHVWSVIHDPTKLWVQIQKDKYL 82
>GAU24540.1 hypothetical protein TSUD_156530 [Trifolium subterraneum]
Length = 1147
Score = 77.8 bits (190), Expect(2) = 6e-15
Identities = 47/101 (46%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Frame = -3
Query: 300 VTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIW---GGPSSHWVKWNMITQPRTR 130
V LANSVL S+P Y MQ WLPQ +CD +D VR FIW G H V+W ITQPR
Sbjct: 586 VVLANSVLSSLPSYHMQINWLPQGMCDDLDRTVRRFIWKGTGDTGMHLVRWEKITQPRRF 645
Query: 129 GG*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKY 7
GG LG + Q K + +P KLWV++ I KY
Sbjct: 646 GG-LGV-RIARLQNVSLLGKLIWEVSNSPGKLWVKLFIDKY 684
Score = 30.0 bits (66), Expect(2) = 6e-15
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = -1
Query: 362 DKINGRLAGWKAGLLNRAGCMLL 294
D+++ +LA WK+ LLN+AG ++L
Sbjct: 566 DRVSAKLASWKSRLLNKAGRVVL 588
>ABD28627.2 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 1296
Score = 79.3 bits (194), Expect = 8e-15
Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Frame = -3
Query: 300 VTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSS---HWVKWNMITQPRTR 130
+TLA SVL +IP Y MQ WLPQ ICDSID R+F+W G ++ H V W IT+P++
Sbjct: 792 LTLATSVLSTIPTYYMQINWLPQNICDSIDQTARNFLWKGSNNKGIHLVNWKTITRPKSI 851
Query: 129 GG*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKY 7
GG LG C+ K + + NKLWV +L KY
Sbjct: 852 GG-LGIRSARDANICL-LGKLVWDMVQSTNKLWVNLLAKKY 890
>KYP63977.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 202
Score = 75.9 bits (185), Expect = 1e-14
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Frame = -3
Query: 300 VTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPS---SHWVKWNMITQPRTR 130
VTL NSVL SIP Y+MQ WLP C+ +D+ + FIW G H VKW+ ITQ R
Sbjct: 42 VTLVNSVLSSIPAYTMQTQWLPSGTCEKLDAISQKFIWSGSDPHRMHLVKWDKITQRRKD 101
Query: 129 GG*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKY 7
GG +G + + K + +P KLWVQV+ SKY
Sbjct: 102 GG-MGVHVARFQNTSL-LGKLIWDLLAHPTKLWVQVIFSKY 140
>GAU48983.1 hypothetical protein TSUD_245740 [Trifolium subterraneum]
Length = 1103
Score = 76.3 bits (186), Expect(2) = 2e-14
Identities = 47/101 (46%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = -3
Query: 300 VTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIW---GGPSSHWVKWNMITQPRTR 130
V LANSVL S+P Y MQ WLPQ +CD +D VR FIW G H V W ITQPR
Sbjct: 645 VVLANSVLSSLPSYHMQINWLPQGMCDDLDRTVRRFIWKGTGDTGMHLVGWEKITQPRRF 704
Query: 129 GG*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKY 7
GG LG + Q K + +P KLWV++ I KY
Sbjct: 705 GG-LGV-RIARLQNVSLLGKLIWEISNSPGKLWVKLFIDKY 743
Score = 30.0 bits (66), Expect(2) = 2e-14
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = -1
Query: 362 DKINGRLAGWKAGLLNRAGCMLL 294
D+++ +LA WK+ LLN+AG ++L
Sbjct: 625 DRVSAKLASWKSRLLNKAGRVVL 647
>KYP62168.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 229
Score = 75.5 bits (184), Expect = 3e-14
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Frame = -3
Query: 294 LANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIW--GGPSSHW--VKWNMITQPRTRG 127
L NSV+ SIP+YSMQ+ WLPQ +C+ I+ R+ +W G S +W V WN +T+P+ G
Sbjct: 94 LINSVVTSIPLYSMQSLWLPQAVCNRINQASRTMLWAKAGSSQYWSLVGWNTVTRPKEFG 153
Query: 126 G*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKYLH 1
G LG + + K + ++P K WV++L +KYLH
Sbjct: 154 G-LGIRESRQVNISL-IGKLIWDLLHSPQKPWVKILQAKYLH 193
>KYP54574.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 233
Score = 75.5 bits (184), Expect = 3e-14
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Frame = -3
Query: 294 LANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIW--GGPSSHW--VKWNMITQPRTRG 127
L NSV+ SIP+YSMQ+ WLPQ +C+ I+ R+ +W G S +W V WN +T+P+ G
Sbjct: 98 LINSVVTSIPLYSMQSLWLPQAVCNRINQASRTMLWAKAGSSQYWSLVGWNTVTRPKEFG 157
Query: 126 G*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKYLH 1
G LG + + K + ++P K WV++L +KYLH
Sbjct: 158 G-LGIRESRQVNISL-IGKLIWDLLHSPQKPWVKILQAKYLH 197
>KYP76854.1 Putative ribonuclease H protein At1g65750 [Cajanus cajan]
Length = 118
Score = 71.2 bits (173), Expect(2) = 5e-14
Identities = 35/62 (56%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Frame = -3
Query: 300 VTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSS---HWVKWNMITQPRTR 130
VTLAN VL S+P Y+MQ WLPQ ICD+ D VR FIW G H W++ITQPR
Sbjct: 27 VTLANLVLASLPSYTMQVQWLPQHICDTCDKMVRQFIWNGNMKRGLHLATWDVITQPRKF 86
Query: 129 GG 124
GG
Sbjct: 87 GG 88
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 368 LMDKINGRLAGWKAGLLNRAGCMLL 294
+++K+ RLA WK LNRAGC+ L
Sbjct: 5 VINKVRDRLASWKGKFLNRAGCVTL 29
>KYP69590.1 Transposon TX1 uncharacterized, partial [Cajanus cajan]
Length = 728
Score = 68.6 bits (166), Expect(2) = 1e-13
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = -3
Query: 294 LANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGP--SSHW--VKWNMITQPRTRG 127
L S + SIP+YSMQ+ WLPQ +C+ ID R +W P + W V W ++TQP+ G
Sbjct: 604 LVESTISSIPVYSMQSLWLPQAVCNKIDQACRRMLWAKPDNTQFWSPVSWEVVTQPKELG 663
Query: 126 G*LGYPQDPGEQYCINR-EKCLAPYPYNPNKLWVQVLISKYLH 1
G LG + + ++R K + P K WV +L + YLH
Sbjct: 664 G-LGVRE--ARRVNVSRLGKLVWDMLSAPQKPWVHLLSNLYLH 703
Score = 35.0 bits (79), Expect(2) = 1e-13
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -1
Query: 368 LMDKINGRLAGWKAGLLNRAGCMLL 294
+MDKI GRLA W++ LLN+AG + L
Sbjct: 580 VMDKIQGRLAAWESKLLNKAGKLCL 604
>KYP61060.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 439
Score = 65.9 bits (159), Expect(2) = 1e-13
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Frame = -3
Query: 294 LANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSS--HW--VKWNMITQPRTRG 127
L S + SIP+YSMQ+ WLPQ +C+ ID R +W + W V W+++TQ + G
Sbjct: 38 LVKSTISSIPVYSMQSLWLPQAVCNRIDQTCRRMLWAKSDNTRFWSPVSWDVVTQSKKLG 97
Query: 126 G*LGYPQDPGEQYCINREKCLAPYPY--NPNKLWVQVLISKYLH 1
G LG RE C + P K WVQ+L + YLH
Sbjct: 98 G-LGV-----------REACRVVWDLLSAPEKPWVQLLSNLYLH 129
Score = 37.7 bits (86), Expect(2) = 1e-13
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -1
Query: 368 LMDKINGRLAGWKAGLLNRAGCMLL 294
+MDKI GRLA WKA LLN+AG + L
Sbjct: 14 VMDKIQGRLAAWKAKLLNKAGKLYL 38
>KYP61720.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 479
Score = 75.9 bits (185), Expect = 1e-13
Identities = 49/115 (42%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Frame = -3
Query: 339 WLESWAS*QGRVHVTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIW---GGPSSH 169
W + + GRV TLAN VL ++P Y MQ YW PQ ICD ID VRSFIW G H
Sbjct: 247 WKSALLNKAGRV--TLANVVLTALPSYGMQLYWYPQYICDFIDKSVRSFIWHSMEGKGPH 304
Query: 168 WVKWNMITQPRTRGG*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKYL 4
V W+ +T+P+ GG LG + Q K + + ++LWV VL KYL
Sbjct: 305 MVGWDKLTRPKNCGG-LGI-RTARNQNTALLGKLVWDLLHPMHQLWVSVLKEKYL 357
>KYP45819.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
cajan]
Length = 145
Score = 72.0 bits (175), Expect = 1e-13
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Frame = -3
Query: 339 WLESWAS*QGRVHVTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGP---SSH 169
W E S GR+ L NSVL +I Y+M+ WLP +CD +D+ R FIW G H
Sbjct: 5 WKERLLSRVGRI--ALVNSVLSAILAYTMETQWLPSGMCDQLDTLSRRFIWNGEGVRKLH 62
Query: 168 WVKWNMITQPRTRGG*LGYPQDPGEQYCINRE-------KCLAPYPYNPNKLWVQVLISK 10
VKW +T+PR GG LG C+ R+ K + ++ +KLWV+V+++K
Sbjct: 63 LVKWETLTRPRKEGG-LG--------VCMARKTNISLLGKLIWDLFHHTDKLWVKVVMAK 113
Query: 9 Y 7
Y
Sbjct: 114 Y 114
>KYP45885.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 1192
Score = 75.5 bits (184), Expect = 2e-13
Identities = 47/115 (40%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Frame = -3
Query: 339 WLESWAS*QGRVHVTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSS---- 172
W S GR+ TL SVL ++P Y+MQ WLP+ ICD ID R F+WG S
Sbjct: 868 WKAKSLSFAGRL--TLTKSVLTALPSYTMQTVWLPRNICDDIDKKNRQFLWGDTSHNKKV 925
Query: 171 HWVKWNMITQPRTRGG*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKY 7
H V W++I QP+ +G LG + C + N +KLWVQVL SKY
Sbjct: 926 HTVSWSVICQPKNQGA-LGIRNMRDMNMAFMMKNCWSMITEN-DKLWVQVLSSKY 978
>GAU35685.1 hypothetical protein TSUD_162570 [Trifolium subterraneum]
Length = 1375
Score = 75.5 bits (184), Expect = 2e-13
Identities = 51/116 (43%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Frame = -3
Query: 339 WLESWAS*QGRVHVTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSS---H 169
W + + GR+ TL SVL SIP Y MQ WLPQ CDSID RSF+W G S+ H
Sbjct: 918 WQHNLLNKAGRM--TLVKSVLNSIPNYYMQVAWLPQTTCDSIDRMTRSFLWKGASNKGIH 975
Query: 168 WVKWNMITQPRTRGG*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKYLH 1
V W+ IT+P+ GG LG + E K + N + LWVQVL KYL+
Sbjct: 976 LVGWDKITKPKKLGG-LGI-RKAREVNTSLLGKLVWHMHQNCDTLWVQVLRHKYLN 1029
>KYP65324.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 729
Score = 75.1 bits (183), Expect = 2e-13
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Frame = -3
Query: 294 LANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIW--GGPSSHW--VKWNMITQPRTRG 127
L NSV+ SIP+YSMQ+ WLPQ +C+ I+ R+ +W G S +W V WN +T+P+ G
Sbjct: 186 LINSVVTSIPLYSMQSLWLPQAVCNRINQASRTMLWAKAGSSRYWSLVGWNTVTRPKEFG 245
Query: 126 G*LGYPQDPGEQYCINREKCLAPYPYNPNKLWVQVLISKYLH 1
G LG + + K + ++P K WV++L +KYLH
Sbjct: 246 G-LGIRESRQVNISL-IGKLIWDLLHSPQKPWVKILQAKYLH 285
>KYP56389.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 261
Score = 73.6 bits (179), Expect = 3e-13
Identities = 45/108 (41%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Frame = -3
Query: 300 VTLANSVLGSIPIYSMQNYWLPQVICDSIDSCVRSFIWGGPSS---HWVKWNMITQPRTR 130
VTL N +L IP Y+MQ WLP C+ +D+ + FIW G S H VKW+ ITQ R
Sbjct: 22 VTLVNFMLSYIPAYTMQTQWLPSGTCEKLDAISQKFIWSGSDSHRMHLVKWDKITQRRKD 81
Query: 129 GG*LGYPQDPGEQYCINR-------EKCLAPYPYNPNKLWVQVLISKY 7
GG LG C+ R K + +P KLWVQV+ SKY
Sbjct: 82 GG-LG--------VCVARFKNTSLLGKLIWDLLAHPTKLWVQVIFSKY 120