BLASTX nr result

ID: Glycyrrhiza29_contig00033511 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00033511
         (536 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU23466.1 hypothetical protein TSUD_331640 [Trifolium subterran...   105   3e-23
XP_003547194.1 PREDICTED: pentatricopeptide repeat-containing pr...   101   8e-22
XP_003593855.1 pentatricopeptide (PPR) repeat protein [Medicago ...    99   1e-20
XP_003541675.1 PREDICTED: pentatricopeptide repeat-containing pr...    90   1e-17
XP_004485976.1 PREDICTED: pentatricopeptide repeat-containing pr...    88   4e-17
XP_007159381.1 hypothetical protein PHAVU_002G233400g [Phaseolus...    83   2e-15
XP_014519176.1 PREDICTED: pentatricopeptide repeat-containing pr...    82   6e-15
XP_017436043.1 PREDICTED: pentatricopeptide repeat-containing pr...    71   3e-11

>GAU23466.1 hypothetical protein TSUD_331640 [Trifolium subterraneum]
          Length = 617

 Score =  105 bits (262), Expect = 3e-23
 Identities = 58/92 (63%), Positives = 66/92 (71%)
 Frame = +3

Query: 261 MAILRLNHYLLEKVLASHFCANHLSSIAFSLYSARNYVPGSYSSANFGAEREGSKCSNTK 440
           MAILRLNHYLL K LASHFC N+LS IA +L S    V GSYS+ NF  + +G    NT+
Sbjct: 1   MAILRLNHYLLGKTLASHFCVNNLSCIALNLCS----VSGSYSATNFEVQSKGK--FNTE 54

Query: 441 NFNDGFGKVGSGFPRESRFAASVNDGVEEEEE 536
           N N+GFGKVG GF  E  FAASVND VEEEE+
Sbjct: 55  NLNEGFGKVGYGFSGELGFAASVNDNVEEEED 86


>XP_003547194.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max] KHN06945.1
           Pentatricopeptide repeat-containing protein,
           chloroplastic [Glycine soja] KRH11127.1 hypothetical
           protein GLYMA_15G090700 [Glycine max]
          Length = 793

 Score =  101 bits (252), Expect = 8e-22
 Identities = 55/92 (59%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
 Frame = +3

Query: 261 MAILRLNHYLLEKVLASHFCANHLSSIAFSLYSARNYV-PGSYSSANFGAEREGSKCSNT 437
           M +LR NHYLL K+LASHF AN+ SS+A SL+SA N V   SYS+AN   + E SKCSN 
Sbjct: 1   MPLLRFNHYLLGKILASHFHANYFSSVALSLFSATNSVFSASYSTANLRDQTE-SKCSNF 59

Query: 438 KNFNDGFGKVGSGFPRESRFAASVNDGVEEEE 533
           +N ND  GKVG GF     F+ASV+DG EEEE
Sbjct: 60  RNINDDLGKVGPGFQESLCFSASVSDGAEEEE 91


>XP_003593855.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
           AES64106.1 pentatricopeptide (PPR) repeat protein
           [Medicago truncatula]
          Length = 790

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 55/92 (59%), Positives = 67/92 (72%)
 Frame = +3

Query: 261 MAILRLNHYLLEKVLASHFCANHLSSIAFSLYSARNYVPGSYSSANFGAEREGSKCSNTK 440
           MAILRLNHYLL K LAS FC N LS IA +L  +   V GS S+A+F A+ +G    NT+
Sbjct: 1   MAILRLNHYLLRKALASRFCGNPLSCIALNL--SHYSVLGSDSTASFEAQCKGK--FNTE 56

Query: 441 NFNDGFGKVGSGFPRESRFAASVNDGVEEEEE 536
           NFNDGFGK+G GF  ESRF ASV+D ++EE+E
Sbjct: 57  NFNDGFGKMGHGFSDESRFVASVDDDLDEEDE 88


>XP_003541675.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max] KRH21116.1 hypothetical
           protein GLYMA_13G221600 [Glycine max]
          Length = 789

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 54/93 (58%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = +3

Query: 261 MAILRLNHYLLEKVLASHFCANH-LSSIAFSLYSARNYV-PGSYSSANFGAEREGSKCSN 434
           M +LR NHYLL K+LASHF AN+  SSIA SL+ A + V   SYS+ N   + EG K SN
Sbjct: 1   MPLLRFNHYLLPKLLASHFHANNNFSSIALSLHYATSSVFSASYSTTNLRHQTEG-KYSN 59

Query: 435 TKNFNDGFGKVGSGFPRESRFAASVNDGVEEEE 533
             NFND  GKVG GF     FAASV+DG EEEE
Sbjct: 60  FGNFNDDLGKVGPGFQESLSFAASVSDGAEEEE 92


>XP_004485976.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62914,
           mitochondrial [Cicer arietinum]
          Length = 784

 Score = 88.2 bits (217), Expect = 4e-17
 Identities = 53/93 (56%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = +3

Query: 261 MAILRL--NHYLLEKVLASHFCANHLSSIAFSLYSARNYVPGSYSSANFGAEREGSKCSN 434
           MAI+RL  NHYLL K LASHFCA H   I  +L+S    V  SYS+ NF A+ +G   SN
Sbjct: 1   MAIMRLKLNHYLLGKALASHFCAKHFQCIVLNLHS----VSCSYSTTNFEAQNKGK--SN 54

Query: 435 TKNFNDGFGKVGSGFPRESRFAASVNDGVEEEE 533
           T+NF D FGKVG G      F+ASVND VEEEE
Sbjct: 55  TENFKDSFGKVGFG------FSASVNDDVEEEE 81


>XP_007159381.1 hypothetical protein PHAVU_002G233400g [Phaseolus vulgaris]
           ESW31375.1 hypothetical protein PHAVU_002G233400g
           [Phaseolus vulgaris]
          Length = 785

 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 47/91 (51%), Positives = 58/91 (63%)
 Frame = +3

Query: 261 MAILRLNHYLLEKVLASHFCANHLSSIAFSLYSARNYVPGSYSSANFGAEREGSKCSNTK 440
           M +LR N++LL K+LAS F  NH  SIAF+L+SA      SYS+A    + EG + SN +
Sbjct: 1   MPLLRFNYHLLAKLLASDFRDNHFPSIAFTLFSA------SYSTAGLRYQSEGKR-SNIR 53

Query: 441 NFNDGFGKVGSGFPRESRFAASVNDGVEEEE 533
           NF DG GK GS +     FAASV DG EEEE
Sbjct: 54  NFKDGLGKAGSAYQESLSFAASVCDGAEEEE 84


>XP_014519176.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62720
           [Vigna radiata var. radiata] XP_014519177.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g62720
           [Vigna radiata var. radiata] XP_014519178.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g62720
           [Vigna radiata var. radiata] XP_014519179.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g62720
           [Vigna radiata var. radiata]
          Length = 792

 Score = 82.0 bits (201), Expect = 6e-15
 Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
 Frame = +3

Query: 261 MAILRLNHYLLEKVLASHFCANHLSSIAFSLYSARNYV-PGSYSSANFGAEREGSKCSNT 437
           M+ LR N+YLL K+LAS+F  NH  SIA +L+SA++ V   SYS+A    + EG + S+ 
Sbjct: 1   MSFLRFNYYLLAKLLASNFRDNHFPSIALTLFSAKHSVLSASYSTAGLRHQSEGKR-SDI 59

Query: 438 KNFNDGFGKVGSGFPRESRFAASVNDGVEEEE 533
           +NF  G GK G+ F     F ASV DGVEEEE
Sbjct: 60  RNFGGGLGKTGTDFQESLSFVASVCDGVEEEE 91


>XP_017436043.1 PREDICTED: pentatricopeptide repeat-containing protein At1g09900
           [Vigna angularis] KOM53598.1 hypothetical protein
           LR48_Vigan09g225700 [Vigna angularis] BAT87280.1
           hypothetical protein VIGAN_05063500 [Vigna angularis
           var. angularis]
          Length = 793

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +3

Query: 273 RLNHYLLEKVLASHFCANHLSSIAFSLYSARNYV-PGSYSSANFGAEREGSKCSNTKNFN 449
           R N+YLL K+LAS+F  NH  SI  + +SA++ V   SYS+A    + EG K S+ +NF+
Sbjct: 6   RFNYYLLAKLLASNFRDNHFPSIGLTFFSAKHSVLSASYSTAGLRYQSEG-KRSDIRNFD 64

Query: 450 DGFGKVGSGFPRESRFAASVNDGVEEEE 533
            G GK G  F     F ASV DG EEE+
Sbjct: 65  CGLGKTGPDFQESLSFVASVCDGAEEEQ 92


Top