BLASTX nr result
ID: Glycyrrhiza29_contig00031742
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00031742
(267 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_717160.1 hypothetical protein BrnapMp063 [Brassica napus] YP_... 117 3e-32
XP_013442824.1 hypothetical protein MTR_0082s0080 [Medicago trun... 104 3e-26
GAU19200.1 hypothetical protein TSUD_198830 [Trifolium subterran... 88 1e-19
YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory... 85 3e-17
YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Ory... 85 3e-17
EEF45986.1 conserved hypothetical protein [Ricinus communis] 80 3e-16
KYP78096.1 hypothetical protein KK1_048934 [Cajanus cajan] 72 1e-14
XP_016435338.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-s... 67 2e-11
XP_015080675.1 PREDICTED: putative F-box/LRR-repeat protein At5g... 63 1e-09
CDY17100.1 BnaC06g00330D [Brassica napus] 57 1e-08
XP_013688462.1 PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodipho... 57 1e-07
>YP_717160.1 hypothetical protein BrnapMp063 [Brassica napus] YP_004927459.1
orf116 (mitochondrion) [Brassica oleracea]
YP_004927573.1 orf116 (mitochondrion) [Brassica
carinata] YP_004927875.1 orf116 (mitochondrion)
[Brassica rapa subsp. oleifera] YP_004927778.1 orf116
(mitochondrion) [Brassica juncea] YP_009228114.1
hypothetical protein AYB38_gp34 (mitochondrion)
[Brassica nigra] BAC98909.1 hypothetical protein
(mitochondrion) [Brassica napus] AEH43448.1 orf116
(mitochondrion) [Brassica rapa subsp. oleifera]
AEH43487.1 orf116 (mitochondrion) [Brassica oleracea]
AEH43588.1 orf116 (mitochondrion) [Brassica carinata]
AEH43672.1 orf116 (mitochondrion) [Brassica juncea]
CBX48376.1 unnamed protein product [Brassica napus]
AEX57680.1 hypothetical protein RasatMp049
(mitochondrion) [Raphanus sativus] AGC81678.1
hypothetical protein DCGMS_00180 (mitochondrion)
[Raphanus sativus] AHY20358.1 hypothetical protein
(mitochondrion) (mitochondrion) [Brassica juncea var.
tumida] AIE42596.1 hypothetical protein RadishMT_p066
(mitochondrion) [Raphanus sativus] AIZ06204.1
hypothetical protein (mitochondrion) [Brassica napus]
AIZ06279.1 hypothetical protein (mitochondrion)
[Brassica napus] AJD85466.1 hypothetical protein
BniMp044 (mitochondrion) [Brassica nigra] AKD00221.1
hypothetical protein (mitochondrion) [Brassica napus]
Length = 116
Score = 117 bits (293), Expect = 3e-32
Identities = 59/68 (86%), Positives = 60/68 (88%)
Frame = +2
Query: 53 MSDPFPCGSWPYHSVPDGQRGIRYSSLRFFCAARSRWTGHVLAVGSMVPKVTSVRQFRLN 232
MSDPFPC SWPYHSVPDGQRGIRYSS R F A R TGH+LAVGSMVPKVTSVRQFRLN
Sbjct: 1 MSDPFPCRSWPYHSVPDGQRGIRYSSSRSF--APFRRTGHMLAVGSMVPKVTSVRQFRLN 58
Query: 233 SSLYVSGP 256
SSLYVSGP
Sbjct: 59 SSLYVSGP 66
>XP_013442824.1 hypothetical protein MTR_0082s0080 [Medicago truncatula] KEH16849.1
hypothetical protein MTR_0082s0080 [Medicago truncatula]
Length = 185
Score = 104 bits (259), Expect = 3e-26
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = -2
Query: 143 KKNVSCYTESPAGHRGPSGKAMIRRGTDHSFFHWGQVHERQLQTSHI 3
+KNVSCYTESPAGHRGPSGKAMIRRGTDHSFFHWGQVHERQLQTSHI
Sbjct: 93 QKNVSCYTESPAGHRGPSGKAMIRRGTDHSFFHWGQVHERQLQTSHI 139
Score = 72.8 bits (177), Expect = 5e-14
Identities = 38/50 (76%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Frame = -1
Query: 237 EELSLNWRTEVTFGTILPTANTCPVQRERAAQKKRKLLYRIP---RWPSG 97
EELSLNWRTEVTFGTILPTANTCPVQRERAAQK P R PSG
Sbjct: 62 EELSLNWRTEVTFGTILPTANTCPVQRERAAQKNVSCYTESPAGHRGPSG 111
>GAU19200.1 hypothetical protein TSUD_198830 [Trifolium subterraneum]
Length = 236
Score = 88.2 bits (217), Expect = 1e-19
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = +2
Query: 137 FFCAARSRWTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQ 265
FFCA RSRWTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQ
Sbjct: 163 FFCAERSRWTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQ 205
>YP_009242020.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
AMQ23374.1 NADH dehydrogenase subunit 4 (mitochondrion)
[Oryza minuta]
Length = 2992
Score = 84.7 bits (208), Expect = 3e-17
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = -3
Query: 160 AGTRSAKKT*AAIPNPPLAIGDRVVRP*SAGERITHSSIGDRCTNDNSKRHTS 2
+G K+T AAIPNPPLAIGD VVRP SAGE ITHSSIGDRCTNDNSKR TS
Sbjct: 1022 SGNAQRKRTSAAIPNPPLAIGDLVVRPSSAGEGITHSSIGDRCTNDNSKRQTS 1074
Score = 61.2 bits (147), Expect = 5e-09
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = -2
Query: 266 PVV*VR*RKARS*A*TGEPKSLSEPYFLQLTRVQSSGNAQRKKNVSCYTESP 111
P + VR R ARS A TGEPKSLS PYFLQLTRV+SSGNAQRK+ + P
Sbjct: 987 PDLLVRLRLARSSARTGEPKSLSLPYFLQLTRVRSSGNAQRKRTSAAIPNPP 1038
>YP_009242008.1 NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
AMQ23370.1 NADH dehydrogenase subunit 4 (mitochondrion)
[Oryza minuta]
Length = 2992
Score = 84.7 bits (208), Expect = 3e-17
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = -3
Query: 160 AGTRSAKKT*AAIPNPPLAIGDRVVRP*SAGERITHSSIGDRCTNDNSKRHTS 2
+G K+T AAIPNPPLAIGD VVRP SAGE ITHSSIGDRCTNDNSKR TS
Sbjct: 1022 SGNAQRKRTSAAIPNPPLAIGDLVVRPSSAGEGITHSSIGDRCTNDNSKRQTS 1074
Score = 58.5 bits (140), Expect = 5e-08
Identities = 33/52 (63%), Positives = 37/52 (71%)
Frame = -2
Query: 266 PVV*VR*RKARS*A*TGEPKSLSEPYFLQLTRVQSSGNAQRKKNVSCYTESP 111
P + VR ARS A TGEPKSLS PYFLQLTRV+SSGNAQRK+ + P
Sbjct: 987 PDLYVRYPYARSSASTGEPKSLSLPYFLQLTRVRSSGNAQRKRTSAAIPNPP 1038
>EEF45986.1 conserved hypothetical protein [Ricinus communis]
Length = 271
Score = 80.1 bits (196), Expect = 3e-16
Identities = 40/62 (64%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Frame = -2
Query: 215 EPKSLSEPYFLQLTRVQSSGNAQR--KKNVSCYTESPAGHRGPSGKAMIRRGTDHSFFHW 42
EP L F QL+ ++ +R + NVSCYTESP GHRGPSGKAMIRRGTDHSFFHW
Sbjct: 140 EPYHLFAEGFDQLSGYPATPLQERAAQTNVSCYTESPVGHRGPSGKAMIRRGTDHSFFHW 199
Query: 41 GQ 36
GQ
Sbjct: 200 GQ 201
>KYP78096.1 hypothetical protein KK1_048934 [Cajanus cajan]
Length = 88
Score = 72.0 bits (175), Expect = 1e-14
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 53 MSDPFPCGSWPYHSVPDGQRGIRYSSLRFF 142
MSDPFPCGSWPYHSVPDGQRGIRYSSLRFF
Sbjct: 1 MSDPFPCGSWPYHSVPDGQRGIRYSSLRFF 30
>XP_016435338.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein
2-like [Nicotiana tabacum]
Length = 201
Score = 66.6 bits (161), Expect = 2e-11
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1
Query: 142 LRCAFPLDWTRVSCRKYGSESDFGSPVQAQLLAL 243
LRCAF LDWT VSCRKYG ESDFGSPVQAQLLAL
Sbjct: 14 LRCAFLLDWTHVSCRKYGYESDFGSPVQAQLLAL 47
>XP_015080675.1 PREDICTED: putative F-box/LRR-repeat protein At5g02700 [Solanum
pennellii]
Length = 610
Score = 63.2 bits (152), Expect = 1e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 113 PAGHRGPSGKAMIRRGTDHSFFHWGQ 36
PAGHRGPSGKAMIRRGTDHSFFHWGQ
Sbjct: 513 PAGHRGPSGKAMIRRGTDHSFFHWGQ 538
>CDY17100.1 BnaC06g00330D [Brassica napus]
Length = 81
Score = 56.6 bits (135), Expect = 1e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 170 HVLAVGSMVPKVTSVRQFRLNSSLYVSGP 256
H+LAVGSMVPKVTSVR FRLNSSLYVSGP
Sbjct: 3 HMLAVGSMVPKVTSVRHFRLNSSLYVSGP 31
>XP_013688462.1 PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
chloroplastic-like isoform X1 [Brassica napus]
Length = 282
Score = 57.0 bits (136), Expect = 1e-07
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +2
Query: 164 TGHVLAVGSMVPKVTSVRQFRLNSSLYVSGP 256
TGH+L VG+MVPK+TSVRQFRLNS LYVSGP
Sbjct: 231 TGHILDVGNMVPKLTSVRQFRLNSMLYVSGP 261