BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00031480
         (969 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP63038.1 Retrovirus-related Pol polyprotein from transposon TN...   308   4e-99
KYP66838.1 Retrovirus-related Pol polyprotein from transposon TN...   325   2e-98
KYP46992.1 Retrovirus-related Pol polyprotein from transposon TN...   306   2e-96
KYP48234.1 Retrovirus-related Pol polyprotein from transposon TN...   315   3e-96
KYP68287.1 Retrovirus-related Pol polyprotein from transposon TN...   309   2e-92
KYP61818.1 Retrovirus-related Pol polyprotein from transposon TN...   308   2e-92
KYP31826.1 Retrovirus-related Pol polyprotein from transposon TN...   308   3e-92
GAU44417.1 hypothetical protein TSUD_100640 [Trifolium subterran...   301   1e-89
GAU36409.1 hypothetical protein TSUD_38770 [Trifolium subterraneum]   300   2e-89
GAU50842.1 hypothetical protein TSUD_232190 [Trifolium subterran...   296   1e-88
KYP32045.1 Retrovirus-related Pol polyprotein from transposon TN...   296   3e-88
GAU33196.1 hypothetical protein TSUD_206550 [Trifolium subterran...   294   4e-88
GAU42845.1 hypothetical protein TSUD_387380 [Trifolium subterran...   295   1e-87
KYP40194.1 Retrovirus-related Pol polyprotein from transposon TN...   278   1e-87
GAU39052.1 hypothetical protein TSUD_396570 [Trifolium subterran...   294   3e-87
KYP68042.1 Retrovirus-related Pol polyprotein from transposon TN...   290   4e-87
KYP61570.1 Retrovirus-related Pol polyprotein from transposon TN...   284   8e-86
GAU34373.1 hypothetical protein TSUD_217130 [Trifolium subterran...   286   1e-84
GAU40816.1 hypothetical protein TSUD_398000 [Trifolium subterran...   275   6e-84
KHM99776.1 Retrovirus-related Pol polyprotein from transposon TN...   269   9e-84

>KYP63038.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 467

 Score =  308 bits (790), Expect = 4e-99
 Identities = 142/283 (50%), Positives = 200/283 (70%), Gaps = 13/283 (4%)
 Frame = +3

Query: 159 GHYADECYA----------KKKNDDEANLAKDDSS---DSEPVVLMVTTNSDLENSKIWY 299
           GH++ EC A          +   D +A++AK+D+    + +P++LM+ TN +  N++ WY
Sbjct: 146 GHFSAECEAAPGRTDQRGSQSHGDYQAHMAKEDNEANLEEQPLMLMMITNPESYNNEEWY 205

Query: 300 LDSGCSNHMTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLY 479
           +DSGCSNHMT HR+W V+FD  K+S V+FAD+R    EG GNV++KR DG+  +I++VLY
Sbjct: 206 IDSGCSNHMTGHRDWFVNFDPKKKSTVKFADNRATQVEGSGNVLVKREDGRQTVITEVLY 265

Query: 480 VPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDC 659
           VP M +NL+S+GQLL KG +++   G LE+YD + + ++  PLA+N+TF+V +   ES C
Sbjct: 266 VPGMTTNLISLGQLLEKGCSVNSVKGFLEIYDKTKRLVMKAPLAKNRTFKVSLNTIESQC 325

Query: 660 MSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSF 839
           +SA    +++WLWH R GHLNF  L LL+ K M++GLP IK P  +CDNCL SKQPRNSF
Sbjct: 326 LSAAMLSDDSWLWHRRLGHLNFRDLSLLKSKEMLTGLPSIKIPKKICDNCLISKQPRNSF 385

Query: 840 SNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
           SN+   +A ++L VVYSDVCGP +  SLGGN+YFVS VD+ SR
Sbjct: 386 SNFTASKANEVLHVVYSDVCGPIDTPSLGGNRYFVSFVDDLSR 428


>KYP66838.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1317

 Score =  325 bits (834), Expect = 2e-98
 Identities = 151/283 (53%), Positives = 207/283 (73%), Gaps = 13/283 (4%)
 Frame = +3

Query: 159  GHYADECYA----------KKKNDDEANLAKDDS---SDSEPVVLMVTTNSDLENSKIWY 299
            GH++ EC A          +  +D +A++AK++S   S+ +P++LM+ TN +   ++ WY
Sbjct: 246  GHFSAECEAAPGRTDQRGSQSHSDYQAHMAKEESEANSEEQPLMLMMITNPESHKNETWY 305

Query: 300  LDSGCSNHMTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLY 479
            +DSGCSNHMT +R+WLV+FDA K+S VRFAD+R + AEG GNV++ R+DG+ A+I+DVLY
Sbjct: 306  IDSGCSNHMTGYRDWLVNFDAKKKSTVRFADNRVIQAEGTGNVLVTRQDGRQAVIADVLY 365

Query: 480  VPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDC 659
            VP MKSN +SMGQLL KGF+M+M  G LE+YD + + ++  PLA+N+TF+V +   ES C
Sbjct: 366  VPGMKSNFISMGQLLEKGFSMNMVCGFLEIYDTTKRMIMKAPLAKNRTFKVSLNTVESQC 425

Query: 660  MSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSF 839
            +SA    ++AWLWH R GHLNF  + LL+ K M++GLP IK P  VCD+CL SKQPR SF
Sbjct: 426  LSAATLSDDAWLWHLRLGHLNFRDMSLLKSKEMLTGLPSIKIPKKVCDSCLISKQPRKSF 485

Query: 840  SNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            SN+   +A K+L VVYSDVCGP +  SLGGN+YFVS VD+ SR
Sbjct: 486  SNFTTSKASKILHVVYSDVCGPIDTPSLGGNRYFVSFVDDLSR 528


>KYP46992.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 614

 Score =  306 bits (784), Expect = 2e-96
 Identities = 140/283 (49%), Positives = 199/283 (70%), Gaps = 13/283 (4%)
 Frame = +3

Query: 159 GHYADECYA----------KKKNDDEANLAKDDSS---DSEPVVLMVTTNSDLENSKIWY 299
           GH++ EC A          +   D +A++ K+D+    + +P++LM+TTN +  N++ WY
Sbjct: 50  GHFSAECEAAPGRTDQRGSQSHGDYQAHIVKEDNEANLEEQPLMLMMTTNPESYNNEEWY 109

Query: 300 LDSGCSNHMTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLY 479
           +DSGCSNHM  HR+W V+FD  K+S V+FAD+R    EG GNV++KR DG+  +I++VLY
Sbjct: 110 IDSGCSNHMIGHRDWFVNFDPKKKSTVKFADNRATQVEGSGNVLVKREDGRQIVITEVLY 169

Query: 480 VPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDC 659
           VP M +NL+S+GQLL KG +++   G LE+YD + + ++  PLA+N+TF+V +   ES C
Sbjct: 170 VPGMTTNLISLGQLLEKGCSVNSVKGFLEIYDKTKRLVMKAPLAKNRTFKVSLNTIESQC 229

Query: 660 MSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSF 839
           +SA    +++WLWH R GHLNF  L LL+ K M++GLP IK P  +CDNCL SKQPRNSF
Sbjct: 230 LSAAMLSDDSWLWHLRLGHLNFRDLSLLKSKEMLTGLPSIKIPKKICDNCLISKQPRNSF 289

Query: 840 SNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
           +N+   +A ++L VVYSDVCGP +  SLGGN+YFVS VD+ SR
Sbjct: 290 NNFTASKASEILHVVYSDVCGPIDTPSLGGNRYFVSFVDDLSR 332


>KYP48234.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1029

 Score =  315 bits (808), Expect = 3e-96
 Identities = 145/270 (53%), Positives = 201/270 (74%)
 Frame = +3

Query: 159  GHYADECYAKKKNDDEANLAKDDSSDSEPVVLMVTTNSDLENSKIWYLDSGCSNHMTSHR 338
            GHYA+ECY KK++++EA L K+D SDS+ V+LMVTT +   +  +WYLD+GCS+HMT  +
Sbjct: 234  GHYAEECYNKKEHNNEAQLVKEDDSDSDQVLLMVTTKTVENSENLWYLDTGCSSHMTGRK 293

Query: 339  EWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLSMGQ 518
            +W    D S +SKV+FAD +T+ AEGIG V I+ ++ + +LIS+VL+VP MKSNLLS GQ
Sbjct: 294  DWFSKLDESVKSKVKFADHKTLDAEGIGEVAIRSKNRQRSLISNVLFVPHMKSNLLSFGQ 353

Query: 519  LLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEAWLW 698
            LL +GF M ME   + VYDN  + ++  PL++N+TF+V+IQ  E  C+ +  + EE WLW
Sbjct: 354  LLERGFKMVMENNGMTVYDNKKRLILRAPLSKNRTFRVEIQVLEHQCLVSAVNSEE-WLW 412

Query: 699  HWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKKLLE 878
            H+R+GHLNF  L LL   NMV+GLP++  P ++C  C+  KQPRN+F  +VP+R++  LE
Sbjct: 413  HYRFGHLNFRDLNLLSRYNMVTGLPRLHQPKEMCRECVECKQPRNTFKQHVPIRSRCKLE 472

Query: 879  VVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            VVYSDVCGP + ESLGGNKYFV+ +D+FSR
Sbjct: 473  VVYSDVCGPLQTESLGGNKYFVTFIDDFSR 502


>KYP68287.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1340

 Score =  309 bits (791), Expect = 2e-92
 Identities = 142/283 (50%), Positives = 200/283 (70%), Gaps = 13/283 (4%)
 Frame = +3

Query: 159  GHYADECYA----------KKKNDDEANLAKDDSS---DSEPVVLMVTTNSDLENSKIWY 299
            GH++ EC A          +   D +A++AK+D+    + +P++LM+ TN +  N++ WY
Sbjct: 269  GHFSAECEAAPGRTDQRGSQSHGDYQAHMAKEDNEANLEEQPLMLMMITNPESYNNEEWY 328

Query: 300  LDSGCSNHMTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLY 479
            +DSGCSNHMT HR+W V+FD  K+S V+FAD+R    EG GNV++KR DG+  +I++VLY
Sbjct: 329  IDSGCSNHMTGHRDWFVNFDPKKKSTVKFADNRATQVEGSGNVLVKREDGRQTVITEVLY 388

Query: 480  VPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDC 659
            VP M +NL+S+GQLL KG +++   G LE+YD + + ++  PLA+N+TF+V +   ES C
Sbjct: 389  VPGMTTNLISLGQLLEKGCSVNSVKGFLEIYDKTKRLVMKAPLAKNRTFKVSLNTIESQC 448

Query: 660  MSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSF 839
            +SA    +++WLWH R GHLNF  L LL+ K M++GLP IK P  +CDNCL SKQPRNSF
Sbjct: 449  LSAAMLSDDSWLWHLRLGHLNFRDLSLLKSKEMLTGLPSIKIPKKICDNCLISKQPRNSF 508

Query: 840  SNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            SN+   +A ++L VVYSDVCGP +  SLGGN+YFVS VD+ SR
Sbjct: 509  SNFTASKANEVLHVVYSDVCGPIDTPSLGGNRYFVSFVDDLSR 551


>KYP61818.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan] KYP63036.1 Retrovirus-related Pol polyprotein from
            transposon TNT 1-94 [Cajanus cajan]
          Length = 1314

 Score =  308 bits (790), Expect = 2e-92
 Identities = 142/283 (50%), Positives = 200/283 (70%), Gaps = 13/283 (4%)
 Frame = +3

Query: 159  GHYADECYA----------KKKNDDEANLAKDDSS---DSEPVVLMVTTNSDLENSKIWY 299
            GH++ EC A          +   D +A++AK+D+    + +P++LM+ TN +  N++ WY
Sbjct: 243  GHFSAECEAAPGRTDQRGSQSHGDYQAHMAKEDNEANLEEQPLMLMMITNPESYNNEEWY 302

Query: 300  LDSGCSNHMTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLY 479
            +DSGCSNHMT HR+W V+FD  K+S V+FAD+R    EG GNV++KR DG+  +I++VLY
Sbjct: 303  IDSGCSNHMTGHRDWFVNFDPKKKSTVKFADNRATQVEGSGNVLVKREDGRQTVITEVLY 362

Query: 480  VPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDC 659
            VP M +NL+S+GQLL KG +++   G LE+YD + + ++  PLA+N+TF+V +   ES C
Sbjct: 363  VPGMTTNLISLGQLLEKGCSVNSVKGFLEIYDKTKRLVMKAPLAKNRTFKVSLNTIESQC 422

Query: 660  MSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSF 839
            +SA    +++WLWH R GHLNF  L LL+ K M++GLP IK P  +CDNCL SKQPRNSF
Sbjct: 423  LSAAMLSDDSWLWHRRLGHLNFRDLSLLKSKEMLTGLPSIKIPKKICDNCLISKQPRNSF 482

Query: 840  SNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            SN+   +A ++L VVYSDVCGP +  SLGGN+YFVS VD+ SR
Sbjct: 483  SNFTASKANEVLHVVYSDVCGPIDTPSLGGNRYFVSFVDDLSR 525


>KYP31826.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1340

 Score =  308 bits (790), Expect = 3e-92
 Identities = 142/283 (50%), Positives = 200/283 (70%), Gaps = 13/283 (4%)
 Frame = +3

Query: 159  GHYADECYA----------KKKNDDEANLAKDDSS---DSEPVVLMVTTNSDLENSKIWY 299
            GH++ EC A          +   D +A++AK+D+    + +P++LM+ TN +  N++ WY
Sbjct: 269  GHFSAECEAAPGRTDQRGSQSHGDYQAHMAKEDNEANLEEQPLMLMMITNPESYNNEEWY 328

Query: 300  LDSGCSNHMTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLY 479
            +DSGCSNHMT HR+W V+FD  K+S V+FAD+R    EG GNV++KR DG+  +I++VLY
Sbjct: 329  IDSGCSNHMTGHRDWFVNFDPKKKSTVKFADNRATQVEGSGNVLVKREDGRQTVITEVLY 388

Query: 480  VPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDC 659
            VP M +NL+S+GQLL KG +++   G LE+YD + + ++  PLA+N+TF+V +   ES C
Sbjct: 389  VPGMTTNLISLGQLLEKGCSVNSVKGFLEIYDKTKRLVMKAPLAKNRTFKVSLNTIESQC 448

Query: 660  MSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSF 839
            +SA    +++WLWH R GHLNF  L LL+ K M++GLP IK P  +CDNCL SKQPRNSF
Sbjct: 449  LSAAMLSDDSWLWHRRLGHLNFRDLSLLKSKEMLTGLPSIKIPKKICDNCLISKQPRNSF 508

Query: 840  SNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            SN+   +A ++L VVYSDVCGP +  SLGGN+YFVS VD+ SR
Sbjct: 509  SNFTASKANEVLHVVYSDVCGPIDTPSLGGNRYFVSFVDDLSR 551


>GAU44417.1 hypothetical protein TSUD_100640 [Trifolium subterraneum]
          Length = 1318

 Score =  301 bits (770), Expect = 1e-89
 Identities = 134/273 (49%), Positives = 197/273 (72%), Gaps = 3/273 (1%)
 Frame = +3

Query: 159  GHYADECYAKKK---NDDEANLAKDDSSDSEPVVLMVTTNSDLENSKIWYLDSGCSNHMT 329
            GHYA EC +KK    + DEA  A    SDS   +LM  TNS+++ S +WYLD+GCSNHMT
Sbjct: 281  GHYARECNSKKVERGDKDEAQFANGGGSDSNDSLLMAITNSEVDKSNLWYLDTGCSNHMT 340

Query: 330  SHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLS 509
             +++W +  D S R  ++FAD+  V   G+G V++KR+DG  ++I++VLYVP M SNL+S
Sbjct: 341  GNKKWFLKLDHSVRRSIKFADNSQVIYAGMGTVLVKRKDGHESVINEVLYVPSMTSNLIS 400

Query: 510  MGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEA 689
            +GQLL K +TM +E   L++YD   + ++  PL+ N+TF+++I   +  C+++  +PEE 
Sbjct: 401  LGQLLEKDYTMKLENRELKIYDAKSRLILKAPLSNNRTFKIEINVIDHHCLASITNPEEN 460

Query: 690  WLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKK 869
            W+WH R+GHLNF SL +L  K+MV GLP+IK PS+VC++C  +KQ RNSF N +PM++  
Sbjct: 461  WIWHHRFGHLNFKSLSMLNSKDMVHGLPQIKTPSEVCEDCCAAKQTRNSFKNELPMKSTH 520

Query: 870  LLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
             LE+VYSDVCGPFEV+S+GGN YF++ +D+++R
Sbjct: 521  KLEMVYSDVCGPFEVKSIGGNNYFLTFIDDYTR 553


>GAU36409.1 hypothetical protein TSUD_38770 [Trifolium subterraneum]
          Length = 1259

 Score =  300 bits (768), Expect = 2e-89
 Identities = 144/285 (50%), Positives = 200/285 (70%), Gaps = 15/285 (5%)
 Frame = +3

Query: 159  GHYADECY--------AKKKNDDEANLAKDDSS---DSEPVVLMVTTNSDLENSK----I 293
            GH+ADEC+         KKK+D +A  A+++SS   D   V LM+ T S++ + +     
Sbjct: 281  GHFADECWFAKDHKWKGKKKHDSDACAAQEESSSDGDENEVKLMMATLSEVSDDQSHTDY 340

Query: 294  WYLDSGCSNHMTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDV 473
            W+LD+GCSNHMTSH+EWL+D + SK+SK+RFADDRT+  EG+G ++I R DGK  ++ DV
Sbjct: 341  WFLDTGCSNHMTSHKEWLIDINPSKKSKIRFADDRTLQVEGMGKMVITRDDGKNVIMEDV 400

Query: 474  LYVPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAES 653
            LYVP +KSNLLS+GQL+ KGF + M+   L ++D +HK ++  PL +N+TFQ+ +  A+ 
Sbjct: 401  LYVPGIKSNLLSIGQLIQKGFEVKMKNNSLSLFDTNHKLILKTPLTKNRTFQINMSTAKL 460

Query: 654  DCMSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRN 833
             C+SA  + +  W+WH R+GHLN  SL+ L   +MV+GLP IK P  VC  C+  KQ RN
Sbjct: 461  MCLSAVETEDINWIWHARFGHLNSKSLRELGTNHMVNGLPIIKVPEKVCKVCMIGKQTRN 520

Query: 834  SFSNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            SF + +P RA+  LEVV+SDVCGPFEV +L GN+YF+S VDEFSR
Sbjct: 521  SFKSEIPSRARNQLEVVHSDVCGPFEVATLAGNRYFISFVDEFSR 565


>GAU50842.1 hypothetical protein TSUD_232190 [Trifolium subterraneum]
          Length = 1078

 Score =  296 bits (757), Expect = 1e-88
 Identities = 138/271 (50%), Positives = 192/271 (70%), Gaps = 1/271 (0%)
 Frame = +3

Query: 159 GHYADECYAK-KKNDDEANLAKDDSSDSEPVVLMVTTNSDLENSKIWYLDSGCSNHMTSH 335
           GHYA E   K KK  +E N A+ + +DS+ V+LMVTTN+  + S +WYLD+GC+NHMT H
Sbjct: 157 GHYASEFQNKSKKKQEEENHARKNDTDSDGVLLMVTTNTSEDQSTLWYLDTGCTNHMTGH 216

Query: 336 REWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLSMG 515
            +WL++ D + +S V+FA +RT+  EG G VM+ R++G    ++DVLYVP MK NLLS+G
Sbjct: 217 IDWLLELDENFKSTVKFAYNRTISVEGKGKVMVTRKNGNHTFVTDVLYVPTMKHNLLSLG 276

Query: 516 QLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEAWL 695
           QL+ KGF +  +   LEV+D + K ++  PL++N+TF+V +Q +E  C S+  + +E WL
Sbjct: 277 QLIEKGFALSTKDKFLEVHDLNKKLVLKAPLSKNRTFKVNLQASEVQCFSSLITEDEKWL 336

Query: 696 WHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKKLL 875
           WH+RYGHLNF SL  L  K+MV GLP I  P  +C+ C  SKQPRNSF N V  R+ + L
Sbjct: 337 WHYRYGHLNFKSLNQLSSKHMVVGLPLIHTPDKLCEGCFASKQPRNSFKNAVYYRSTQPL 396

Query: 876 EVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            VV+SD+CGP E E+LGGN+YF++ VDEF+R
Sbjct: 397 HVVHSDICGPIETETLGGNRYFMTCVDEFTR 427


>KYP32045.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1205

 Score =  296 bits (758), Expect = 3e-88
 Identities = 140/264 (53%), Positives = 191/264 (72%), Gaps = 3/264 (1%)
 Frame = +3

Query: 159  GHYADECYAKKKN---DDEANLAKDDSSDSEPVVLMVTTNSDLENSKIWYLDSGCSNHMT 329
            GH+A EC     N   D EA +A+ + S+ E V+LMVTT  + + +  WYLD+GCSNHMT
Sbjct: 220  GHFASECRFNSGNGGKDAEARMAQGEESEEEQVLLMVTTKEEHDKNDCWYLDTGCSNHMT 279

Query: 330  SHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLS 509
             H+EW V  D + +SKV+FAD  ++ AEGIG + I+R+DGK + IS+VLYVP+MKSNLLS
Sbjct: 280  GHKEWFVSLDETAKSKVKFADHSSIDAEGIGKISIQRKDGKHSYISNVLYVPKMKSNLLS 339

Query: 510  MGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEA 689
            +GQLL KG+TM ++   L+V+D ++K ++  PL+ N+TF+V IQ   + C+ +  +  E 
Sbjct: 340  LGQLLEKGYTMTLKDKVLKVFDCNNKLILKAPLSSNRTFKVGIQVDGNQCLVSRVA-HEG 398

Query: 690  WLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKK 869
            W WH RYGHLNF SL +L    +V+GLP IK P+++C+ CLTSKQ RNSF  +VP ++ K
Sbjct: 399  WTWHQRYGHLNFKSLDMLSKTGIVTGLPTIKTPNELCNECLTSKQTRNSFVAHVPTKSVK 458

Query: 870  LLEVVYSDVCGPFEVESLGGNKYF 941
             LE+VYSDVCGPFEV SLGGN+YF
Sbjct: 459  ALEMVYSDVCGPFEVNSLGGNRYF 482


>GAU33196.1 hypothetical protein TSUD_206550 [Trifolium subterraneum]
          Length = 1084

 Score =  294 bits (753), Expect = 4e-88
 Identities = 139/271 (51%), Positives = 190/271 (70%), Gaps = 1/271 (0%)
 Frame = +3

Query: 159  GHYADECYAK-KKNDDEANLAKDDSSDSEPVVLMVTTNSDLENSKIWYLDSGCSNHMTSH 335
            GHYA EC  K KK  +EAN A+ + +DS+ V+LMVTTN+  + S +WYLD+ C+NHMT H
Sbjct: 211  GHYASECQNKGKKKQEEANHARQNDTDSDGVLLMVTTNTSEDQSTLWYLDTCCTNHMTGH 270

Query: 336  REWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLSMG 515
            R+ L++ D + +S V+FAD+ T+  EG G VM  R++G    ++DVLYVP MK NLLS+G
Sbjct: 271  RDRLLELDENFKSTVKFADNSTISVEGKGKVMFTRKNGNHTFVTDVLYVPTMKHNLLSLG 330

Query: 516  QLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEAWL 695
            QL+ KGF +  +   LEV+D   K ++  PL++N+TF+V +Q +E  C S+  + +E WL
Sbjct: 331  QLIEKGFALSTKDKFLEVHDPYKKLVLKAPLSKNRTFKVDLQASEVQCFSSLITEDEKWL 390

Query: 696  WHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKKLL 875
            WH+RYGHLNF SL  L  K+MV GLP I  P  +C+ C  SKQPRNSF N V  R+ + L
Sbjct: 391  WHYRYGHLNFKSLNQLSSKHMVVGLPLIHTPDKLCEGCFASKQPRNSFKNTVYYRSTQPL 450

Query: 876  EVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
             VV+SD+CGP E  +LGGNKYF++ VDEF+R
Sbjct: 451  HVVHSDICGPIETATLGGNKYFMTCVDEFTR 481


>GAU42845.1 hypothetical protein TSUD_387380 [Trifolium subterraneum]
          Length = 1239

 Score =  295 bits (755), Expect = 1e-87
 Identities = 143/285 (50%), Positives = 199/285 (69%), Gaps = 15/285 (5%)
 Frame = +3

Query: 159  GHYADECY--------AKKKNDDEANLAKDDSS---DSEPVVLMVTTNSDLEN----SKI 293
            GH+A+EC+         KKK+D +A  A+++SS   D   V LM+ T S++ +    +  
Sbjct: 252  GHFANECWFAKDHKLKGKKKHDSDACAAQEESSSDSDENEVKLMMATLSEVSDDHSHTDY 311

Query: 294  WYLDSGCSNHMTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDV 473
            W+LD+GCSNHMTSH+EWL+D + SK+SK+RFA DRT+ AEGIG ++I R DGK  ++ DV
Sbjct: 312  WFLDTGCSNHMTSHKEWLIDINPSKKSKIRFAYDRTLQAEGIGKMVITRDDGKNVIMEDV 371

Query: 474  LYVPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAES 653
            LYVP MKSNLLS+ QL+ KGF + M+   L ++D +HK ++  PL +N+TFQ+ +  A+ 
Sbjct: 372  LYVPGMKSNLLSICQLIQKGFEVKMKNNSLSLFDTNHKLILKTPLTKNRTFQINMSTAKL 431

Query: 654  DCMSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRN 833
             C+SA  + +  W+WH R+GHLNF SL+ L   ++V+GLP IK P  VC  C+  KQ R 
Sbjct: 432  MCLSAIETEDRNWIWHARFGHLNFKSLRELGTNHIVNGLPIIKVPEKVCKVCMIGKQTRK 491

Query: 834  SFSNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            SF + +P RA+  LEVV+SDVCGPFEV +L GN+YF+S VDEFSR
Sbjct: 492  SFKSEIPSRARNQLEVVHSDVCGPFEVATLAGNRYFISFVDEFSR 536


>KYP40194.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 420

 Score =  278 bits (710), Expect = 1e-87
 Identities = 123/235 (52%), Positives = 169/235 (71%)
 Frame = +3

Query: 264 TNSDLENSKIWYLDSGCSNHMTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRR 443
           TN +  N++ WY+DSGCSNHM  HR+W V+FD  ++S V+FAD R    +G  NV++KR 
Sbjct: 2   TNPESYNNEEWYIDSGCSNHMNGHRDWFVNFDPKEKSTVKFADSRATQVKGSRNVLVKRE 61

Query: 444 DGKGALISDVLYVPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKT 623
           DG+  +I+ VLYVP M +NL+S+GQLL KG +++   G LE+YD + + ++  PLA+N+T
Sbjct: 62  DGRQIVITKVLYVPGMTTNLISLGQLLEKGCSVNSVKGFLEIYDKAKRLVMKAPLAKNRT 121

Query: 624 FQVKIQPAESDCMSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCD 803
           F+V +   ES C+SA    +++WLWH R GHLNF  L LL+ K M++GLP IK P  +CD
Sbjct: 122 FKVSLNTIESQCLSASMLSDDSWLWHLRLGHLNFRDLSLLKSKEMLTGLPSIKIPKKICD 181

Query: 804 NCLTSKQPRNSFSNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
           NCL +KQPRNSFSN+   +A ++L V YSDVCGP +  SLGGN+YFVS VD+ SR
Sbjct: 182 NCLINKQPRNSFSNFTASKASEILHVFYSDVCGPIDTPSLGGNRYFVSFVDDLSR 236


>GAU39052.1 hypothetical protein TSUD_396570 [Trifolium subterraneum]
          Length = 1309

 Score =  294 bits (753), Expect = 3e-87
 Identities = 138/271 (50%), Positives = 190/271 (70%), Gaps = 1/271 (0%)
 Frame = +3

Query: 159  GHYADECYAK-KKNDDEANLAKDDSSDSEPVVLMVTTNSDLENSKIWYLDSGCSNHMTSH 335
            GHYA EC  K KK  +EAN A  + +DS+ V+LMVTTN+  + S +WYLD+GC+NHMT H
Sbjct: 281  GHYASECQNKGKKKQEEANHAGQNDTDSDGVLLMVTTNTSEDQSTLWYLDTGCTNHMTGH 340

Query: 336  REWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLSMG 515
            R+WL++ D + +S V+FAD+ T+  EG G VM+ R++G    ++DVLYVP MK NLLS+G
Sbjct: 341  RDWLLELDETFKSTVKFADNSTISVEGKGKVMVTRKNGNHTFVTDVLYVPTMKHNLLSLG 400

Query: 516  QLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEAWL 695
            QL+ KGF +  +   LEV+D   K ++  PL++N+TF+V +Q +E  C S+  + ++  L
Sbjct: 401  QLIEKGFALSTKDKFLEVHDPYKKLVLKAPLSKNRTFKVNLQASEVQCFSSLITEDKKRL 460

Query: 696  WHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKKLL 875
            WH+RYGHLNF SL  L  K+MV GLP I  P  +C+ C  SKQPRNSF N V  R  + L
Sbjct: 461  WHYRYGHLNFKSLNQLSSKHMVVGLPLIHTPDKLCEGCFASKQPRNSFKNTVYYRLTQPL 520

Query: 876  EVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
             VV+SD+CGP E  +LGGN+YF++ VDEF+R
Sbjct: 521  HVVHSDICGPIETATLGGNRYFMTCVDEFTR 551


>KYP68042.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 999

 Score =  290 bits (743), Expect = 4e-87
 Identities = 138/272 (50%), Positives = 188/272 (69%), Gaps = 2/272 (0%)
 Frame = +3

Query: 159  GHYADECYAKKKNDDEANLAKDDSSD-SEPVVLMVTTNS-DLENSKIWYLDSGCSNHMTS 332
            GHYA  C       DEA LA+++  D SE V+LMVTT   +      WYLD+GCS HMT 
Sbjct: 277  GHYAKSCQYPNPRRDEARLAREEEDDDSEQVLLMVTTTQKEGGGDNCWYLDTGCSTHMTG 336

Query: 333  HREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLSM 512
             ++W V+ D S +SKV+FADDR + AEG+G ++I+R++   A I+DVL+VP MKSNLLS+
Sbjct: 337  RKDWFVNLDESIKSKVKFADDRVMIAEGVGKILIRRKNDSRAFITDVLFVPGMKSNLLSL 396

Query: 513  GQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEAW 692
            GQLL KG+   +E   L +YD+ H+ ++  PL +N+ F+V I   + +C +A  + EE W
Sbjct: 397  GQLLEKGYVSKLEDKMLTIYDSQHRLLLKSPLTKNRMFKVDIDILDHECFAAAINKEE-W 455

Query: 693  LWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKKL 872
            LWH+R+GHLNF  L  L+ K++V GLP I  PS+VC  CL  KQ RNSF  +V +++K+ 
Sbjct: 456  LWHYRFGHLNFKDLHTLKSKSLVKGLPHINQPSEVCKECLECKQSRNSFKQHVSIKSKEK 515

Query: 873  LEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            LEVVYSDVC P + ESLGGN+YFVS +D+FSR
Sbjct: 516  LEVVYSDVCDPIQTESLGGNRYFVSFIDDFSR 547


>KYP61570.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 846

 Score =  284 bits (727), Expect = 8e-86
 Identities = 132/272 (48%), Positives = 188/272 (69%), Gaps = 2/272 (0%)
 Frame = +3

Query: 159  GHYADECYAKKKNDDEANLAKDDSSDSEPVVLMVTT--NSDLENSKIWYLDSGCSNHMTS 332
            GH A  C       DEA +A ++ +D E V+LM TT     LE++  WYLD+GCS HM  
Sbjct: 237  GHIAKYCRHYNPRRDEAQMAHEEDNDLEQVLLMATTVQAEGLEDNS-WYLDTGCSTHMKG 295

Query: 333  HREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLSM 512
             ++W    D S +SKV+FAD R + ++G+G +M+K+++G   LI+DVL+VP MKSNLLS+
Sbjct: 296  RKDWFASLDESIKSKVKFADARVLTSKGVGKIMVKKKNGDQVLITDVLFVPRMKSNLLSL 355

Query: 513  GQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEAW 692
            GQLL KG+T  +E   L VYD  +  ++  PL +N+TF+V+I   + +C++     EE W
Sbjct: 356  GQLLEKGYTSRLENKMLRVYDKQNHLILKSPLTKNRTFKVEIDVVDQECLAVAVKKEE-W 414

Query: 693  LWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKKL 872
            LWH+R GHLNF  L+ L+ K+MV GLP I  P++VC +C+ SKQPR+SF  +V  + K+ 
Sbjct: 415  LWHYRLGHLNFRDLQNLKSKDMVRGLPHISPPNEVCSDCMLSKQPRSSFQQHVSSKTKER 474

Query: 873  LEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            L+VVYSDVCGP ++ESLGGN+YF+S +D+FSR
Sbjct: 475  LQVVYSDVCGPIQIESLGGNRYFISFIDDFSR 506


>GAU34373.1 hypothetical protein TSUD_217130 [Trifolium subterraneum]
          Length = 1210

 Score =  286 bits (732), Expect = 1e-84
 Identities = 137/273 (50%), Positives = 184/273 (67%), Gaps = 3/273 (1%)
 Frame = +3

Query: 159  GHYADECYAKKKND--DEANLAKDDSSDSEPVVLMVTT-NSDLENSKIWYLDSGCSNHMT 329
            GHYA +C +KK  D  DEANL  ++ SD E V  M      +L N + W+LD+GCSNHMT
Sbjct: 271  GHYASDCRSKKPKDTSDEANLV-EEQSDKEAVTFMAAMLEEELANGE-WFLDTGCSNHMT 328

Query: 330  SHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLS 509
             H++W + FD+S++SKVR AD R++  E IGN++IKRRDG  A I D+LYVP M  NLLS
Sbjct: 329  GHKDWFIKFDSSRKSKVRLADSRSIQVEVIGNMIIKRRDGNSAEIEDILYVPGMDCNLLS 388

Query: 510  MGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEA 689
            +GQL+ KGF++ ++    E+YD +   ++  PL  N+TF   I   E  CM      +++
Sbjct: 389  VGQLIEKGFSVSIKNEKFELYDPASLLVLRTPLTTNRTFNSMINSTEVACMKTVTENQQS 448

Query: 690  WLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKK 869
            WLWH R+GHLNF  L  L  K MV+GLPK+  P  +CD CL  KQ RN F+  +PMR+  
Sbjct: 449  WLWHLRFGHLNFRYLNQLVSKEMVTGLPKLDVPEKICDGCLVGKQARNVFTKELPMRSSS 508

Query: 870  LLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
            +LEVV+SDVCGPF+ +SLG N+YF++ VDEFSR
Sbjct: 509  VLEVVHSDVCGPFDEKSLGANRYFITFVDEFSR 541


>GAU40816.1 hypothetical protein TSUD_398000 [Trifolium subterraneum]
          Length = 637

 Score =  275 bits (702), Expect = 6e-84
 Identities = 127/275 (46%), Positives = 185/275 (67%), Gaps = 5/275 (1%)
 Frame = +3

Query: 159  GHYADECYAKKKN-----DDEANLAKDDSSDSEPVVLMVTTNSDLENSKIWYLDSGCSNH 323
            GHYA EC A KK      ++EAN+A+DDS+  + V  MVT   +   S +WY D+GCSNH
Sbjct: 237  GHYASECKAPKKKKSQNTEEEANVAQDDSTSEDDVSFMVTITDETAESMVWYFDTGCSNH 296

Query: 324  MTSHREWLVDFDASKRSKVRFADDRTVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNL 503
            MT ++  L DF+    ++++ A+   + AEG+GNV+I+R +GK A I  VLYVP MK NL
Sbjct: 297  MTGNKSILTDFNKCLNTRIKLANGNFIAAEGMGNVVIQRSNGKKADIEKVLYVPGMKCNL 356

Query: 504  LSMGQLLAKGFTMHMEGGCLEVYDNSHKKMISVPLAENKTFQVKIQPAESDCMSAEASPE 683
            +S+GQLL KGF    EG  L+++D+  + ++    ++N+TF+ +++  E +C++     +
Sbjct: 357  MSVGQLLEKGFKAVFEGETLKLFDSRQRLILKTAQSQNRTFKTQVKTIEVECLATSTEDK 416

Query: 684  EAWLWHWRYGHLNFNSLKLLRDKNMVSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRA 863
            ++ LWH RYGHLNF SL +L  KNMV GLP + AP D C  CL  K PR+ F + +PMR+
Sbjct: 417  DSDLWHKRYGHLNFKSLSMLNSKNMVLGLPSVIAPVDTCTTCLLGKHPRSPFKSNLPMRS 476

Query: 864  KKLLEVVYSDVCGPFEVESLGGNKYFVSLVDEFSR 968
             ++L VV+SD+CGP +V S GGNKYF++ VDE+SR
Sbjct: 477  SEVLNVVHSDICGPIDVLSTGGNKYFITFVDEYSR 511


>KHM99776.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Glycine soja]
          Length = 466

 Score =  269 bits (688), Expect = 9e-84
 Identities = 125/250 (50%), Positives = 173/250 (69%)
 Frame = +3

Query: 219 KDDSSDSEPVVLMVTTNSDLENSKIWYLDSGCSNHMTSHREWLVDFDASKRSKVRFADDR 398
           + +  D E V+ MVT   + ++   W+LD+GCS HM+  +EW V+ D + +S+VRFADDR
Sbjct: 166 RKEKVDIEEVLYMVTVKDESDHGDNWFLDTGCSTHMSGKKEWFVEIDFTVKSRVRFADDR 225

Query: 399 TVPAEGIGNVMIKRRDGKGALISDVLYVPEMKSNLLSMGQLLAKGFTMHMEGGCLEVYDN 578
           T+  EG+G VMIK+RDG    IS VLYVP MKSNLLS+GQLL KG+ M +E   ++VYDN
Sbjct: 226 TMKVEGVGKVMIKKRDGSKCFISGVLYVPGMKSNLLSIGQLLEKGYKMVLEDCAMKVYDN 285

Query: 579 SHKKMISVPLAENKTFQVKIQPAESDCMSAEASPEEAWLWHWRYGHLNFNSLKLLRDKNM 758
             + +I   L++N+TF+ ++      C+++    EE WLWH+RYGHLNF  L  L+ K +
Sbjct: 286 ERRLLIKANLSKNRTFKAELDVLVQQCLASTIDKEE-WLWHFRYGHLNFTDLNRLQSKGI 344

Query: 759 VSGLPKIKAPSDVCDNCLTSKQPRNSFSNYVPMRAKKLLEVVYSDVCGPFEVESLGGNKY 938
           V G+P IK P+DVC  C+ SK  RNSF+  V  R+K+ L+VV+SDVCGP +  + GGNKY
Sbjct: 345 VKGIPHIKVPNDVCGECIKSKMSRNSFNQNVSTRSKRKLQVVFSDVCGPIQHMTPGGNKY 404

Query: 939 FVSLVDEFSR 968
           FV+ +DEFSR
Sbjct: 405 FVTFIDEFSR 414