BLASTX nr result
ID: Glycyrrhiza29_contig00030808
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza29_contig00030808
(279 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERF82250.1 FdhD protein [Bradyrhizobium sp. DFCI-1] 146 1e-40
OCX25925.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016] 146 2e-40
KIU54449.1 integrase, partial [Bradyrhizobium elkanii] 138 4e-39
WP_043855073.1 integrase [Bradyrhizobium elkanii] KIU52644.1 int... 140 3e-38
ABE65096.1 phage integrase (plasmid) [Nitrobacter hamburgensis X14] 140 4e-38
WP_036045106.1 integrase [Bradyrhizobium yuanmingense] 139 5e-38
WP_012564771.1 integrase [Oligotropha carboxidovorans] ACI94747.... 139 7e-38
WP_024584213.1 integrase [Bradyrhizobium sp. OHSU_III] 139 7e-38
WP_044414607.1 MULTISPECIES: integrase [Bradyrhizobiaceae] KIZ39... 138 1e-37
WP_035697115.1 integrase [Bradyrhizobium liaoningense] 138 1e-37
OCX26010.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016] 138 1e-37
WP_024584968.1 integrase [Bradyrhizobium sp. OHSU_III] 138 2e-37
BAR63251.1 integrase/recombinase protein (plasmid) [Bradyrhizobi... 136 4e-37
WP_015822435.1 integrase [Methylobacterium extorquens] CAX24244.... 137 5e-37
SDF01826.1 Site-specific recombinase XerD [Bradyrhizobium sp. R5] 136 1e-36
WP_002719015.1 hypothetical protein [Afipia felis] EKS26839.1 hy... 136 1e-36
KPH79302.1 integrase, partial [Bosea vaviloviae] 129 2e-35
KPH75947.1 integrase, partial [Bosea vaviloviae] 129 2e-35
WP_048758122.1 integrase [Afipia felis] CEG10450.1 site-specific... 132 3e-35
WP_019200229.1 MULTISPECIES: integrase [Bradyrhizobiaceae] 129 6e-34
>ERF82250.1 FdhD protein [Bradyrhizobium sp. DFCI-1]
Length = 390
Score = 146 bits (369), Expect = 1e-40
Identities = 71/74 (95%), Positives = 73/74 (98%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADI +GP+FRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY
Sbjct: 286 EWLERADISRGPIFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAAQRGVSLPEA
Sbjct: 346 LTEAAQRGVSLPEA 359
>OCX25925.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]
Length = 390
Score = 146 bits (368), Expect = 2e-40
Identities = 70/74 (94%), Positives = 73/74 (98%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADIGKGP+FRAIDRWEA+EERALTPQSINLIVKRRCAMAGL+ REFSAHGLRSGY
Sbjct: 286 EWLERADIGKGPIFRAIDRWEAIEERALTPQSINLIVKRRCAMAGLEPREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAAQRGVSLPEA
Sbjct: 346 LTEAAQRGVSLPEA 359
>KIU54449.1 integrase, partial [Bradyrhizobium elkanii]
Length = 224
Score = 138 bits (347), Expect = 4e-39
Identities = 65/74 (87%), Positives = 71/74 (95%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADI KGP+FRAIDRWEA EERALTPQSINLI+KRRCAMAGL+ REFSAHGLRSGY
Sbjct: 120 EWLERADIAKGPIFRAIDRWEATEERALTPQSINLIIKRRCAMAGLEPREFSAHGLRSGY 179
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+LPEA
Sbjct: 180 LTEAARQGVALPEA 193
>WP_043855073.1 integrase [Bradyrhizobium elkanii] KIU52644.1 integrase
[Bradyrhizobium elkanii]
Length = 390
Score = 140 bits (352), Expect = 3e-38
Identities = 67/74 (90%), Positives = 72/74 (97%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADI KGP+FRAIDRWEAVEERALTPQSINLIVKRRCAMAGL+ REFSAHGLRSGY
Sbjct: 286 EWLERADIAKGPIFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLEPREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+LPEA
Sbjct: 346 LTEAARQGVALPEA 359
>ABE65096.1 phage integrase (plasmid) [Nitrobacter hamburgensis X14]
Length = 422
Score = 140 bits (353), Expect = 4e-38
Identities = 66/74 (89%), Positives = 72/74 (97%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADIGKGP+FRAIDRWEA+EERALTPQSINLIVKRRC MAGL+ REFSAHGLRSGY
Sbjct: 286 EWLERADIGKGPIFRAIDRWEAIEERALTPQSINLIVKRRCVMAGLEPREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+LPEA
Sbjct: 346 LTEAARQGVALPEA 359
>WP_036045106.1 integrase [Bradyrhizobium yuanmingense]
Length = 390
Score = 139 bits (351), Expect = 5e-38
Identities = 67/74 (90%), Positives = 72/74 (97%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWL RADI KGPVFRAIDRWEA+EERALTPQSINLIVKRRCAMAGL+AREFSAHGLR+GY
Sbjct: 286 EWLHRADITKGPVFRAIDRWEAIEERALTPQSINLIVKRRCAMAGLEAREFSAHGLRAGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA+RGV+LPEA
Sbjct: 346 LTEAARRGVALPEA 359
>WP_012564771.1 integrase [Oligotropha carboxidovorans] ACI94747.1 phage integrase
[Oligotropha carboxidovorans OM5] AEI04734.1 phage
integrase (plasmid) [Oligotropha carboxidovorans OM4]
AEI08363.1 phage integrase (plasmid) [Oligotropha
carboxidovorans OM5]
Length = 390
Score = 139 bits (350), Expect = 7e-38
Identities = 67/74 (90%), Positives = 72/74 (97%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADI KGPVFRAIDRWEA+EERALTPQSINLIVKRRCAMAGL+ REFSAHGLRSGY
Sbjct: 286 EWLERADISKGPVFRAIDRWEALEERALTPQSINLIVKRRCAMAGLEPREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+LPEA
Sbjct: 346 LTEAARQGVALPEA 359
>WP_024584213.1 integrase [Bradyrhizobium sp. OHSU_III]
Length = 390
Score = 139 bits (350), Expect = 7e-38
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADI +GP+FRAIDRWEAVEE+ALTPQSINLIVKRRC +AGL+ REFSAHGLRSGY
Sbjct: 286 EWLERADIARGPIFRAIDRWEAVEEKALTPQSINLIVKRRCVLAGLEPREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAAQRGVSLPEA
Sbjct: 346 LTEAAQRGVSLPEA 359
>WP_044414607.1 MULTISPECIES: integrase [Bradyrhizobiaceae] KIZ39782.1 integrase
[Rhodopseudomonas palustris] KQW18148.1 integrase
[Afipia sp. Root123D2]
Length = 390
Score = 138 bits (348), Expect = 1e-37
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADI KGPVFRAIDRWEA+EER LTPQSINLIVKRRCAMAGL+ REFSAHGLRSGY
Sbjct: 286 EWLERADIAKGPVFRAIDRWEAIEERTLTPQSINLIVKRRCAMAGLEPREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+LPEA
Sbjct: 346 LTEAARQGVALPEA 359
>WP_035697115.1 integrase [Bradyrhizobium liaoningense]
Length = 390
Score = 138 bits (348), Expect = 1e-37
Identities = 65/74 (87%), Positives = 72/74 (97%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWL RADI +GP+FRAIDRWEA+EERALTPQSINLIVKRRCAMAGLDAREFSAHGLR+GY
Sbjct: 286 EWLLRADISQGPIFRAIDRWEAIEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRAGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA+RG++LPEA
Sbjct: 346 LTEAARRGIALPEA 359
>OCX26010.1 integrase (plasmid) [Bradyrhizobium sp. UASWS1016]
Length = 376
Score = 138 bits (347), Expect = 1e-37
Identities = 65/74 (87%), Positives = 71/74 (95%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADI KGP+FRAIDRWEA EERALTPQSINLI+KRRCAMAGL+ REFSAHGLRSGY
Sbjct: 286 EWLERADISKGPIFRAIDRWEATEERALTPQSINLIIKRRCAMAGLEPREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+LPEA
Sbjct: 346 LTEAARQGVALPEA 359
>WP_024584968.1 integrase [Bradyrhizobium sp. OHSU_III]
Length = 390
Score = 138 bits (347), Expect = 2e-37
Identities = 65/74 (87%), Positives = 71/74 (95%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADI KGP+FRAIDRWEA EERALTPQSINLI+KRRCAMAGL+ REFSAHGLRSGY
Sbjct: 286 EWLERADISKGPIFRAIDRWEATEERALTPQSINLIIKRRCAMAGLEPREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+LPEA
Sbjct: 346 LTEAARQGVALPEA 359
>BAR63251.1 integrase/recombinase protein (plasmid) [Bradyrhizobium
diazoefficiens]
Length = 335
Score = 136 bits (342), Expect = 4e-37
Identities = 65/74 (87%), Positives = 71/74 (95%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWL RADI KGPVFRAID+WEA+EERALTPQSINLIVKRRCAMAG +AREFSAHGLR+GY
Sbjct: 231 EWLHRADIMKGPVFRAIDQWEAIEERALTPQSINLIVKRRCAMAGFEAREFSAHGLRAGY 290
Query: 44 LTEAAQRGVSLPEA 3
LTEAA+RGV+LPEA
Sbjct: 291 LTEAARRGVALPEA 304
>WP_015822435.1 integrase [Methylobacterium extorquens] CAX24244.1
integrase/recombinase protein [Methylobacterium
extorquens DM4]
Length = 390
Score = 137 bits (344), Expect = 5e-37
Identities = 64/74 (86%), Positives = 72/74 (97%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERAD+ KGP+FRAIDRWEA+EERALTPQSINLIVKRRCAMAGL+ R+FSAHGLRSGY
Sbjct: 286 EWLERADVAKGPIFRAIDRWEALEERALTPQSINLIVKRRCAMAGLEPRKFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+LPEA
Sbjct: 346 LTEAARQGVALPEA 359
>SDF01826.1 Site-specific recombinase XerD [Bradyrhizobium sp. R5]
Length = 409
Score = 136 bits (343), Expect = 1e-36
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADI GPVFRAIDRWEAVE+RALTPQSINLIVKRRC MAGL+AREFSAHGLRSGY
Sbjct: 286 EWLERADITTGPVFRAIDRWEAVEDRALTPQSINLIVKRRCTMAGLEAREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+LPEA
Sbjct: 346 LTEAARQGVALPEA 359
>WP_002719015.1 hypothetical protein [Afipia felis] EKS26839.1 hypothetical protein
HMPREF9697_03955 [Afipia felis ATCC 53690]
Length = 393
Score = 136 bits (342), Expect = 1e-36
Identities = 64/74 (86%), Positives = 72/74 (97%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLERADIGKGP+FRAIDRWEA+EERALTPQS+NLIVKRRCA+AGL+ REFSAHGLRSGY
Sbjct: 286 EWLERADIGKGPIFRAIDRWEALEERALTPQSVNLIVKRRCAIAGLEPREFSAHGLRSGY 345
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+L EA
Sbjct: 346 LTEAARQGVALQEA 359
>KPH79302.1 integrase, partial [Bosea vaviloviae]
Length = 219
Score = 129 bits (323), Expect = 2e-35
Identities = 60/74 (81%), Positives = 68/74 (91%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EW+ERAD+ KGPVFRAIDRWEA+++RALTPQ+INLI+KRRC MAGLD EFSAHGLRSGY
Sbjct: 115 EWIERADVKKGPVFRAIDRWEAIDDRALTPQAINLILKRRCGMAGLDPVEFSAHGLRSGY 174
Query: 44 LTEAAQRGVSLPEA 3
LTEAA+ GVSLP A
Sbjct: 175 LTEAARNGVSLPAA 188
>KPH75947.1 integrase, partial [Bosea vaviloviae]
Length = 220
Score = 129 bits (323), Expect = 2e-35
Identities = 59/74 (79%), Positives = 69/74 (93%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EW+ERAD+ KGPVFRAIDRWEA+++RALTPQ++NLI+KRRCAMAGLD EFSAHGLRSGY
Sbjct: 116 EWIERADVKKGPVFRAIDRWEAIDDRALTPQAVNLILKRRCAMAGLDPVEFSAHGLRSGY 175
Query: 44 LTEAAQRGVSLPEA 3
LTEAA+ GV+LP A
Sbjct: 176 LTEAARNGVALPAA 189
>WP_048758122.1 integrase [Afipia felis] CEG10450.1 site-specific tyrosine
recombinase XerD [Afipia felis]
Length = 394
Score = 132 bits (332), Expect = 3e-35
Identities = 63/74 (85%), Positives = 69/74 (93%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWLER DI KGP+FRAIDRWEA+EERALTPQSINLI+KRRCAMAGL REFSAHGLRSGY
Sbjct: 287 EWLERGDISKGPIFRAIDRWEALEERALTPQSINLILKRRCAMAGLGPREFSAHGLRSGY 346
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++GV+ PEA
Sbjct: 347 LTEAARQGVAPPEA 360
>WP_019200229.1 MULTISPECIES: integrase [Bradyrhizobiaceae]
Length = 389
Score = 129 bits (323), Expect = 6e-34
Identities = 62/74 (83%), Positives = 68/74 (91%)
Frame = -2
Query: 224 EWLERADIGKGPVFRAIDRWEAVEERALTPQSINLIVKRRCAMAGLDAREFSAHGLRSGY 45
EWL RADI GPVFRAIDRWEA+EERALTPQSINLIVKRRCAMA LD REF+AHGLRSG+
Sbjct: 285 EWLFRADIQTGPVFRAIDRWEAIEERALTPQSINLIVKRRCAMAELDPREFTAHGLRSGF 344
Query: 44 LTEAAQRGVSLPEA 3
LTEAA++G+ LPEA
Sbjct: 345 LTEAARQGIGLPEA 358