BLASTX nr result

ID: Glycyrrhiza29_contig00030487 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00030487
         (390 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006578305.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   3e-06
XP_006578304.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   3e-06
KHN08291.1 Pentatricopeptide repeat-containing protein [Glycine ...    55   3e-06
XP_006578303.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   3e-06

>XP_006578305.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like isoform X3 [Glycine max]
          Length = 542

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
 Frame = +3

Query: 24  LHEDKVEMDSETFSILEAFTG--*AEVFGGAAVIWNSIFSLG 143
           + EDK+EMD+ET SIL+AFTG   AEVFGG AV WNS+  LG
Sbjct: 501 MDEDKIEMDNETLSILKAFTGCVQAEVFGGEAVTWNSVSFLG 542


>XP_006578304.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like isoform X2 [Glycine max]
          Length = 550

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
 Frame = +3

Query: 24  LHEDKVEMDSETFSILEAFTG--*AEVFGGAAVIWNSIFSLG 143
           + EDK+EMD+ET SIL+AFTG   AEVFGG AV WNS+  LG
Sbjct: 476 MDEDKIEMDNETLSILKAFTGCVQAEVFGGEAVTWNSVSFLG 517


>KHN08291.1 Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 575

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
 Frame = +3

Query: 24  LHEDKVEMDSETFSILEAFTG--*AEVFGGAAVIWNSIFSLG 143
           + EDK+EMD+ET SIL+AFTG   AEVFGG AV WNS+  LG
Sbjct: 501 MDEDKIEMDNETLSILKAFTGCVQAEVFGGEAVTWNSVSFLG 542


>XP_006578303.1 PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like isoform X1 [Glycine max] KRH62276.1
           hypothetical protein GLYMA_04G097400 [Glycine max]
          Length = 575

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
 Frame = +3

Query: 24  LHEDKVEMDSETFSILEAFTG--*AEVFGGAAVIWNSIFSLG 143
           + EDK+EMD+ET SIL+AFTG   AEVFGG AV WNS+  LG
Sbjct: 501 MDEDKIEMDNETLSILKAFTGCVQAEVFGGEAVTWNSVSFLG 542


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