BLASTX nr result

ID: Glycyrrhiza29_contig00030009 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00030009
         (246 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SED05821.1 transcriptional regulator, AraC family [Bradyrhizobiu...    79   2e-15
WP_024582953.1 MULTISPECIES: AraC family transcriptional regulat...    77   6e-15
WP_074824193.1 AraC family transcriptional regulator [Bradyrhizo...    67   3e-11
SDT49419.1 transcriptional regulator, AraC family [Bradyrhizobiu...    66   7e-11
WP_057862988.1 AraC family transcriptional regulator [Bradyrhizo...    66   7e-11
SDO87257.1 transcriptional regulator, AraC family [Afipia sp. GA...    64   5e-10
SHG71750.1 transcriptional regulator, AraC family [Bradyrhizobiu...    60   6e-09
WP_045009800.1 AraC family transcriptional regulator [Bradyrhizo...    58   4e-08
WP_060912755.1 AraC family transcriptional regulator [Bradyrhizo...    58   6e-08
SEN97911.1 transcriptional regulator, AraC family [Bradyrhizobiu...    57   8e-08
WP_027546956.1 AraC family transcriptional regulator [Bradyrhizo...    57   8e-08
WP_008142921.1 AraC family transcriptional regulator [Bradyrhizo...    57   8e-08
WP_063680662.1 AraC family transcriptional regulator [Bradyrhizo...    57   1e-07
WP_027552321.1 AraC family transcriptional regulator [Bradyrhizo...    57   1e-07
WP_063985828.1 AraC family transcriptional regulator [Bradyrhizo...    56   2e-07
WP_027520633.1 AraC family transcriptional regulator [Bradyrhizo...    56   3e-07
WP_045002417.1 AraC family transcriptional regulator [Bradyrhizo...    55   4e-07
WP_071909308.1 AraC family transcriptional regulator [Bradyrhizo...    55   5e-07
WP_063693654.1 AraC family transcriptional regulator [Bradyrhizo...    55   5e-07
WP_027530262.1 AraC family transcriptional regulator [Bradyrhizo...    55   7e-07

>SED05821.1 transcriptional regulator, AraC family [Bradyrhizobium
           erythrophlei]
          Length = 320

 Score = 78.6 bits (192), Expect = 2e-15
 Identities = 47/81 (58%), Positives = 47/81 (58%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLLQSPDAVDEAGF                                 LK
Sbjct: 162 GALSLAMDYSDLLLQSPDAVDEAGFAIAAHLLDLAALGLGARGDLAAAAQRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           SLLMIL KRFTEPDFSAHKLA
Sbjct: 222 SLLMILAKRFTEPDFSAHKLA 242


>WP_024582953.1 MULTISPECIES: AraC family transcriptional regulator
           [Bradyrhizobium] KIU45019.1 AraC family transcriptional
           regulator [Bradyrhizobium elkanii] OCX26812.1 AraC
           family transcriptional regulator [Bradyrhizobium sp.
           UASWS1016]
          Length = 320

 Score = 77.0 bits (188), Expect = 6e-15
 Identities = 46/81 (56%), Positives = 47/81 (58%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLLQSPDAVDEAGF                                 LK
Sbjct: 162 GALSLAMDYSDLLLQSPDAVDEAGFAIAAHLLDLVALGLGARGDLAAAAQRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           SLLMILE RFTEP+FSAHKLA
Sbjct: 222 SLLMILEARFTEPEFSAHKLA 242


>WP_074824193.1 AraC family transcriptional regulator [Bradyrhizobium lablabi]
           SDI28350.1 transcriptional regulator, AraC family
           [Bradyrhizobium ottawaense] SED67298.1 transcriptional
           regulator, AraC family [Bradyrhizobium lablabi]
           SHL63671.1 transcriptional regulator, AraC family
           [Bradyrhizobium lablabi]
          Length = 320

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 40/81 (49%), Positives = 45/81 (55%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL+ P AVDEAGF                                 LK
Sbjct: 162 GALSLAMDYSDLLLRHPGAVDEAGFAIAGHLMDLAALGLGARSELATEARRGGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++LMIL++RFTEPDFSA KLA
Sbjct: 222 AVLMILQRRFTEPDFSAQKLA 242


>SDT49419.1 transcriptional regulator, AraC family [Bradyrhizobium canariense]
          Length = 320

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 40/81 (49%), Positives = 43/81 (53%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLLQ+  AVDEAG                                   K
Sbjct: 162 GALSLAMDYSDLLLQNSAAVDEAGIAISAHLADLVSLGLGARGDLAQAAQRGGLRSVRRK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++LMILEKRFTEPDFSA KLA
Sbjct: 222 TVLMILEKRFTEPDFSAQKLA 242


>WP_057862988.1 AraC family transcriptional regulator [Bradyrhizobium lablabi]
           KRR16052.1 AraC family transcriptional regulator
           [Bradyrhizobium lablabi]
          Length = 320

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 40/81 (49%), Positives = 44/81 (54%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL+ P AVDEAGF                                 L+
Sbjct: 162 GALSLAMDYSDLLLRHPGAVDEAGFAIANHLMDLAALGLGARRDVAANAQRGGVRAVRLQ 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           S+LMIL+KRF EPDFSA KLA
Sbjct: 222 SVLMILQKRFAEPDFSAQKLA 242


>SDO87257.1 transcriptional regulator, AraC family [Afipia sp. GAS231]
          Length = 320

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 39/81 (48%), Positives = 43/81 (53%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL  P AVDEAGF                                 LK
Sbjct: 162 GALSLAMDYSDLLLCHPGAVDEAGFAIAGHLMDLAALGLGARSDIAAEARRGGVRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++LMIL++RF EPDFSA KLA
Sbjct: 222 AVLMILQRRFAEPDFSAQKLA 242


>SHG71750.1 transcriptional regulator, AraC family [Bradyrhizobium
           erythrophlei]
          Length = 320

 Score = 60.5 bits (145), Expect = 6e-09
 Identities = 37/81 (45%), Positives = 41/81 (50%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL+ P AVDEAG                                  L 
Sbjct: 162 GALSLAMDYSDLLLRHPAAVDEAGMAIAQHLMDLASLGLGARGELALAAQRGGLRAVRLN 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L IL +RF EPDFSAHKLA
Sbjct: 222 AVLAILSRRFAEPDFSAHKLA 242


>WP_045009800.1 AraC family transcriptional regulator [Bradyrhizobium sp. LTSP849]
           KJC54673.1 AraC family transcriptional regulator
           [Bradyrhizobium sp. LTSP849]
          Length = 319

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 37/81 (45%), Positives = 40/81 (49%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL+ P A DEAG                                  LK
Sbjct: 162 GALSLAMDYSDLLLRHPTAADEAGMAIAAHLLDLAAIGLGARSDVAASARRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L ILE RF EPDFSA KLA
Sbjct: 222 AVLTILEARFHEPDFSAQKLA 242


>WP_060912755.1 AraC family transcriptional regulator [Bradyrhizobium
           diazoefficiens] BAR56252.1 transcriptional regulatory
           protein [Bradyrhizobium diazoefficiens]
          Length = 319

 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 37/81 (45%), Positives = 40/81 (49%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL+ P A DEAG                                  LK
Sbjct: 162 GALSLAMDYSDLLLRHPAAADEAGMAIAAHLLDLAAIGLGARSDTAAAARRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L ILE RF EPDFSA KLA
Sbjct: 222 AVLSILEMRFHEPDFSAQKLA 242


>SEN97911.1 transcriptional regulator, AraC family [Bradyrhizobium sp. OK095]
          Length = 319

 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 36/81 (44%), Positives = 40/81 (49%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL+ P A DEAG                                  LK
Sbjct: 162 GALSLAMDYSDLLLRHPAAADEAGMAIATHLLDLAAIGLGARSDIAAAAQRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L +LE RF EPDFSA KLA
Sbjct: 222 AVLSVLEMRFHEPDFSAQKLA 242


>WP_027546956.1 AraC family transcriptional regulator [Bradyrhizobium sp. WSM2254]
          Length = 319

 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 37/81 (45%), Positives = 40/81 (49%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL+ P A DEAG                                  LK
Sbjct: 162 GALSLAMDYSDLLLRHPAAADEAGMAIAAHLLDLAAIGLGARSDIAAAARRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L ILE RF EPDFSA KLA
Sbjct: 222 AVLPILETRFHEPDFSAQKLA 242


>WP_008142921.1 AraC family transcriptional regulator [Bradyrhizobium sp. YR681]
           EJN08570.1 transcriptional regulator containing an
           amidase domain and an AraC-type DNA-binding HTH domain
           [Bradyrhizobium sp. YR681]
          Length = 319

 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 37/81 (45%), Positives = 39/81 (48%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL  P A DEAG                                  LK
Sbjct: 162 GALSLAMDYSDLLLHHPAAADEAGMAIAAHLLDLAAIGLGARSDIAAAARRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L ILE RF EPDFSA KLA
Sbjct: 222 AVLSILEMRFHEPDFSAQKLA 242


>WP_063680662.1 AraC family transcriptional regulator [Bradyrhizobium neotropicale]
           OAF11660.1 AraC family transcriptional regulator
           [Bradyrhizobium neotropicale]
          Length = 319

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 36/81 (44%), Positives = 39/81 (48%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSL MDYSDLLL+ P A DEAG                                  LK
Sbjct: 162 GALSLVMDYSDLLLRHPTAADEAGMAIAAHLLDLAAIGLGARSDVAAAARRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L ILE RF EPDFSA KLA
Sbjct: 222 AVLAILETRFHEPDFSAQKLA 242


>WP_027552321.1 AraC family transcriptional regulator [Bradyrhizobium sp. Cp5.3]
          Length = 319

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 36/81 (44%), Positives = 39/81 (48%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSL MDYSDLLL+ P A DEAG                                  LK
Sbjct: 162 GALSLVMDYSDLLLRHPTAADEAGMAIAAHLLDLAAIGLGARSDVAAAARRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L ILE RF EPDFSA KLA
Sbjct: 222 AVLAILETRFHEPDFSAQKLA 242


>WP_063985828.1 AraC family transcriptional regulator [Bradyrhizobium sp. G22]
           CUU22043.1 Transcriptional regulator AraC family CDS
           [Bradyrhizobium sp.]
          Length = 319

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 36/81 (44%), Positives = 40/81 (49%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL++P A DEAG                                  LK
Sbjct: 162 GALSLAMDYSDLLLRNPTAADEAGMAIAGHLLDLAAIGLGARSDIATAARRGGLRVVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L ILE RF EP FSA KLA
Sbjct: 222 AVLSILEARFHEPGFSAQKLA 242


>WP_027520633.1 AraC family transcriptional regulator [Bradyrhizobium sp. Ec3.3]
          Length = 319

 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 36/81 (44%), Positives = 40/81 (49%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL+ P AVDEAG                                  L+
Sbjct: 162 GALSLAMDYSDLLLRHPVAVDEAGMAIAAHLLDLAALGLGARADIASAASRRGLGAVRLQ 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           + L IL+ RF EPDFSA KLA
Sbjct: 222 AALAILQARFQEPDFSAQKLA 242


>WP_045002417.1 AraC family transcriptional regulator [Bradyrhizobium sp. LTSP857]
           KJC47872.1 AraC family transcriptional regulator
           [Bradyrhizobium sp. LTSP857]
          Length = 319

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 36/81 (44%), Positives = 39/81 (48%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYS LLL+ P A DEAG                                  LK
Sbjct: 162 GALSLAMDYSGLLLRHPTAADEAGMAIAAHLLDLAAIGLGARSDVAASARRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L ILE RF EPDFSA KLA
Sbjct: 222 AVLTILEARFHEPDFSAQKLA 242


>WP_071909308.1 AraC family transcriptional regulator [Bradyrhizobium japonicum]
           APG08042.1 AraC family transcriptional regulator
           [Bradyrhizobium japonicum]
          Length = 319

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 35/81 (43%), Positives = 40/81 (49%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSLAMDYSDLLL++P A DEAG                                  L+
Sbjct: 162 GALSLAMDYSDLLLRNPTAADEAGMAIAGHLLDLAAIGLGARSDIATAAQRGGLRAVRLR 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L ILE RF EP FSA KLA
Sbjct: 222 AVLSILETRFHEPGFSAQKLA 242


>WP_063693654.1 AraC family transcriptional regulator [Bradyrhizobium stylosanthis]
          Length = 319

 Score = 55.1 bits (131), Expect = 5e-07
 Identities = 34/81 (41%), Positives = 40/81 (49%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GAL+LAMDYSDLLL  P A DEAG                                  LK
Sbjct: 162 GALTLAMDYSDLLLHHPVAADEAGMAIAAHLIDLAAIGLGARNDVAAAARRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++++IL+ RF EPDFSA KLA
Sbjct: 222 AVMLILQARFHEPDFSAQKLA 242


>WP_027530262.1 AraC family transcriptional regulator [Bradyrhizobium sp. WSM3983]
          Length = 319

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 35/81 (43%), Positives = 38/81 (46%)
 Frame = -3

Query: 244 GALSLAMDYSDLLLQSPDAVDEAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 65
           GALSL MDYSDLLL+ P A DEAG                                  LK
Sbjct: 162 GALSLVMDYSDLLLRHPTAADEAGMAIASHLLDLAAIGLGARSDIAVAARRRGLRAVRLK 221

Query: 64  SLLMILEKRFTEPDFSAHKLA 2
           ++L  LE RF EPDFSA KLA
Sbjct: 222 AVLSTLEARFHEPDFSAQKLA 242


Top