BLASTX nr result

ID: Glycyrrhiza29_contig00029668 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00029668
         (357 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006575096.1 PREDICTED: putative E3 ubiquitin-protein ligase R...    70   1e-11
XP_006575097.1 PREDICTED: putative E3 ubiquitin-protein ligase R...    70   1e-11
XP_014622843.1 PREDICTED: putative E3 ubiquitin-protein ligase R...    65   5e-10
XP_017415469.1 PREDICTED: putative E3 ubiquitin-protein ligase R...    50   4e-06
XP_007144588.1 hypothetical protein PHAVU_007G168300g [Phaseolus...    54   7e-06

>XP_006575096.1 PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X1
           [Glycine max] KRH71485.1 hypothetical protein
           GLYMA_02G150400 [Glycine max]
          Length = 834

 Score = 69.7 bits (169), Expect(2) = 1e-11
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +3

Query: 210 AILLQEMDKMVECVDRQDKGGKNKRKLTLPCVVPASFPSSLIEFPRYAL 356
           ++++ EMDK  +  DRQDKG KNKRKLT P ++PASFPSSLIEFPRY L
Sbjct: 24  SVIVPEMDKTDDGEDRQDKGCKNKRKLTHPSILPASFPSSLIEFPRYQL 72



 Score = 26.9 bits (58), Expect(2) = 1e-11
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +2

Query: 164 QTMRA*--GNRSFCSHSCNSPP 223
           +TMRA   GN SFCS SC S P
Sbjct: 2   ETMRASDTGNSSFCSQSCGSWP 23


>XP_006575097.1 PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X3
           [Glycine max] KRH71486.1 hypothetical protein
           GLYMA_02G150400 [Glycine max]
          Length = 776

 Score = 69.7 bits (169), Expect(2) = 1e-11
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +3

Query: 210 AILLQEMDKMVECVDRQDKGGKNKRKLTLPCVVPASFPSSLIEFPRYAL 356
           ++++ EMDK  +  DRQDKG KNKRKLT P ++PASFPSSLIEFPRY L
Sbjct: 24  SVIVPEMDKTDDGEDRQDKGCKNKRKLTHPSILPASFPSSLIEFPRYQL 72



 Score = 26.9 bits (58), Expect(2) = 1e-11
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +2

Query: 164 QTMRA*--GNRSFCSHSCNSPP 223
           +TMRA   GN SFCS SC S P
Sbjct: 2   ETMRASDTGNSSFCSQSCGSWP 23


>XP_014622843.1 PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2
           [Glycine max]
          Length = 805

 Score = 65.5 bits (158), Expect = 5e-10
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +3

Query: 228 MDKMVECVDRQDKGGKNKRKLTLPCVVPASFPSSLIEFPRYAL 356
           MDK  +  DRQDKG KNKRKLT P ++PASFPSSLIEFPRY L
Sbjct: 1   MDKTDDGEDRQDKGCKNKRKLTHPSILPASFPSSLIEFPRYQL 43


>XP_017415469.1 PREDICTED: putative E3 ubiquitin-protein ligase RF4 isoform X1
           [Vigna angularis] BAT95643.1 hypothetical protein
           VIGAN_08240300 [Vigna angularis var. angularis]
          Length = 842

 Score = 50.1 bits (118), Expect(2) = 4e-06
 Identities = 26/44 (59%), Positives = 31/44 (70%)
 Frame = +3

Query: 225 EMDKMVECVDRQDKGGKNKRKLTLPCVVPASFPSSLIEFPRYAL 356
           EMDK     DRQDKG KNKRKL+ P ++PAS   SL +FPRY +
Sbjct: 29  EMDK-TGGEDRQDKGCKNKRKLSHPSILPASLSLSLFDFPRYEI 71



 Score = 27.7 bits (60), Expect(2) = 4e-06
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +2

Query: 182 GNRSFCSHSCNSPPR 226
           GN SFCS SC S PR
Sbjct: 10  GNSSFCSQSCGSCPR 24


>XP_007144588.1 hypothetical protein PHAVU_007G168300g [Phaseolus vulgaris]
           ESW16582.1 hypothetical protein PHAVU_007G168300g
           [Phaseolus vulgaris]
          Length = 841

 Score = 53.5 bits (127), Expect(2) = 7e-06
 Identities = 27/49 (55%), Positives = 34/49 (69%)
 Frame = +3

Query: 210 AILLQEMDKMVECVDRQDKGGKNKRKLTLPCVVPASFPSSLIEFPRYAL 356
           ++ + EMDK  +  DRQDKG KNKRKL  P ++PAS P  L EFPRY +
Sbjct: 24  SVSVPEMDKTGDGEDRQDKGCKNKRKLAHPSILPASLP--LFEFPRYEM 70



 Score = 23.5 bits (49), Expect(2) = 7e-06
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 182 GNRSFCSHSCNSPP 223
           G+ SFCS SC S P
Sbjct: 10  GSSSFCSQSCGSWP 23


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